RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 TTF2Q9UNY4 1162 aaKnown RBP18.18■□□□□ 0.5
CHMP4BP1-201ENST00000556017 MYO1BO43795 1136 aa18.17■□□□□ 0.5
CHMP4BP1-201ENST00000556017 CRHR2Q13324 411 aa18.17■□□□□ 0.5
CHMP4BP1-201ENST00000556017 TAF7LQ5H9L4 462 aa18.17■□□□□ 0.5
CHMP4BP1-201ENST00000556017 PRPF38BQ5VTL8 546 aaKnown RBP18.17■□□□□ 0.5
CHMP4BP1-201ENST00000556017 CNKSR2Q8WXI2 1034 aa18.17■□□□□ 0.5
CHMP4BP1-201ENST00000556017 ZSWIM8A7E2V4 1837 aa18.16■□□□□ 0.5
CHMP4BP1-201ENST00000556017 RBM5P52756 815 aaKnown RBP eCLIP18.16■□□□□ 0.5
CHMP4BP1-201ENST00000556017 ANKRD13AQ8IZ07 590 aa18.16■□□□□ 0.5
CHMP4BP1-201ENST00000556017 MRPL50Q8N5N7 158 aaKnown RBP18.16■□□□□ 0.5
CHMP4BP1-201ENST00000556017 TMEM39BQ9GZU3 492 aa18.16■□□□□ 0.5
CHMP4BP1-201ENST00000556017 IQSEC3Q9UPP2 1182 aaPredicted RBP18.16■□□□□ 0.5
CHMP4BP1-201ENST00000556017 ANP32CO43423 234 aa18.15■□□□□ 0.5
CHMP4BP1-201ENST00000556017 CRKP46108 304 aa18.15■□□□□ 0.5
CHMP4BP1-201ENST00000556017 IREB2P48200 963 aaKnown RBP18.15■□□□□ 0.5
CHMP4BP1-201ENST00000556017 ELP3Q9H9T3 547 aa18.15■□□□□ 0.5
CHMP4BP1-201ENST00000556017 TRIM17Q9Y577 477 aa18.15■□□□□ 0.5
CHMP4BP1-201ENST00000556017 MYH13Q9UKX3 1938 aa18.15■□□□□ 0.5
CHMP4BP1-201ENST00000556017 POTEFA5A3E0 1075 aa18.14■□□□□ 0.49
CHMP4BP1-201ENST00000556017 FAM9BQ8IZU0 186 aa18.14■□□□□ 0.49
CHMP4BP1-201ENST00000556017 KLHDC4Q8TBB5 520 aa18.14■□□□□ 0.49
CHMP4BP1-201ENST00000556017 CD99L2Q8TCZ2 262 aa18.14■□□□□ 0.49
CHMP4BP1-201ENST00000556017 OPTNQ96CV9 577 aa18.14■□□□□ 0.49
CHMP4BP1-201ENST00000556017 MROH5Q6ZUA9 1318 aa18.14■□□□□ 0.49
CHMP4BP1-201ENST00000556017 TCP10L2B9ZVM9 353 aa18.13■□□□□ 0.49
CHMP4BP1-201ENST00000556017 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.13■□□□□ 0.49
CHMP4BP1-201ENST00000556017 BRI3BPQ8WY22 251 aa18.13■□□□□ 0.49
CHMP4BP1-201ENST00000556017 USP44Q9H0E7 712 aa18.13■□□□□ 0.49
CHMP4BP1-201ENST00000556017 PDE8BO95263 885 aa18.12■□□□□ 0.49
CHMP4BP1-201ENST00000556017 FGFR2P21802 821 aa18.12■□□□□ 0.49
CHMP4BP1-201ENST00000556017 CACNB3P54284 484 aa18.12■□□□□ 0.49
CHMP4BP1-201ENST00000556017 TNFAIP1Q13829 316 aa18.12■□□□□ 0.49
CHMP4BP1-201ENST00000556017 VGLL4Q14135 290 aa18.12■□□□□ 0.49
CHMP4BP1-201ENST00000556017 PTPN22Q9Y2R2 807 aa18.12■□□□□ 0.49
CHMP4BP1-201ENST00000556017 ZNF316A6NFI3 1004 aaPredicted RBP18.11■□□□□ 0.49
CHMP4BP1-201ENST00000556017 RFX5P48382 616 aaPredicted RBP18.11■□□□□ 0.49
CHMP4BP1-201ENST00000556017 BCAMP50895 628 aa18.11■□□□□ 0.49
CHMP4BP1-201ENST00000556017 HDLBPQ00341 1268 aaKnown RBP18.11■□□□□ 0.49
CHMP4BP1-201ENST00000556017 APOBEC3HQ6NTF7 200 aaKnown RBP18.11■□□□□ 0.49
CHMP4BP1-201ENST00000556017 SSH1Q8WYL5 1049 aa18.11■□□□□ 0.49
CHMP4BP1-201ENST00000556017 CHAF1AQ13111 956 aaPredicted RBP18.1■□□□□ 0.49
CHMP4BP1-201ENST00000556017 ARMC5Q96C12 935 aa18.1■□□□□ 0.49
CHMP4BP1-201ENST00000556017 SNCAIPQ9Y6H5 919 aa18.1■□□□□ 0.49
CHMP4BP1-201ENST00000556017 MAP3K9P80192 1104 aa18.09■□□□□ 0.49
CHMP4BP1-201ENST00000556017 SP3Q02447 781 aa18.09■□□□□ 0.49
CHMP4BP1-201ENST00000556017 METTL24Q5JXM2 366 aa18.09■□□□□ 0.49
CHMP4BP1-201ENST00000556017 FAM43AQ8N2R8 423 aa18.09■□□□□ 0.49
CHMP4BP1-201ENST00000556017 ERO1AQ96HE7 468 aa18.09■□□□□ 0.49
CHMP4BP1-201ENST00000556017 ZDHHC15Q96MV8 337 aa18.09■□□□□ 0.49
CHMP4BP1-201ENST00000556017 MRIQ9BWK5 157 aa18.09■□□□□ 0.49
CHMP4BP1-201ENST00000556017 KIF16BQ96L93 1317 aa18.08■□□□□ 0.49
CHMP4BP1-201ENST00000556017 PTPRCP08575 1304 aa18.07■□□□□ 0.48
CHMP4BP1-201ENST00000556017 CCL15-CCL14A0A0B4J2E2 113 aa18.07■□□□□ 0.48
CHMP4BP1-201ENST00000556017 SPDYE5A6NIY4 337 aa18.07■□□□□ 0.48
CHMP4BP1-201ENST00000556017 CCL15Q16663 113 aa18.07■□□□□ 0.48
CHMP4BP1-201ENST00000556017 ATG9AQ7Z3C6 839 aa18.07■□□□□ 0.48
CHMP4BP1-201ENST00000556017 TBC1D22AQ8WUA7 517 aa18.07■□□□□ 0.48
CHMP4BP1-201ENST00000556017 TEKT1Q969V4 418 aa18.07■□□□□ 0.48
CHMP4BP1-201ENST00000556017 EFCC1Q9HA90 598 aa18.07■□□□□ 0.48
CHMP4BP1-201ENST00000556017 FKBP1CQ5VVH2 108 aa18.06■□□□□ 0.48
CHMP4BP1-201ENST00000556017 INTS3Q68E01 1043 aaKnown RBP18.06■□□□□ 0.48
CHMP4BP1-201ENST00000556017 OTUD7BQ6GQQ9 843 aa18.06■□□□□ 0.48
CHMP4BP1-201ENST00000556017 FAM83AQ86UY5 434 aa18.06■□□□□ 0.48
CHMP4BP1-201ENST00000556017 OTUD5Q96G74 571 aa18.06■□□□□ 0.48
CHMP4BP1-201ENST00000556017 PCDH10Q9P2E7 1040 aa18.06■□□□□ 0.48
CHMP4BP1-201ENST00000556017 RPAP1Q9BWH6 1393 aaPredicted RBP18.05■□□□□ 0.48
CHMP4BP1-201ENST00000556017 TNNI2P48788 182 aa18.05■□□□□ 0.48
CHMP4BP1-201ENST00000556017 VPS37DQ86XT2 251 aa18.05■□□□□ 0.48
CHMP4BP1-201ENST00000556017 ZKSCAN4Q969J2 545 aaPredicted RBP18.05■□□□□ 0.48
CHMP4BP1-201ENST00000556017 EN2P19622 333 aaPredicted RBP18.04■□□□□ 0.48
CHMP4BP1-201ENST00000556017 GTF2A2P52657 109 aa18.04■□□□□ 0.48
CHMP4BP1-201ENST00000556017 SLFN5Q08AF3 891 aa18.04■□□□□ 0.48
CHMP4BP1-201ENST00000556017 PUM3Q15397 648 aaKnown RBP18.04■□□□□ 0.48
CHMP4BP1-201ENST00000556017 TAF1CQ15572 869 aaPredicted RBP18.04■□□□□ 0.48
CHMP4BP1-201ENST00000556017 CAVIN4Q5BKX8 364 aa18.04■□□□□ 0.48
CHMP4BP1-201ENST00000556017 HHIPL2Q6UWX4 724 aa18.04■□□□□ 0.48
CHMP4BP1-201ENST00000556017 ZNF333Q96JL9 665 aa18.04■□□□□ 0.48
CHMP4BP1-201ENST00000556017 SUGT1Q9Y2Z0 365 aa18.04■□□□□ 0.48
CHMP4BP1-201ENST00000556017 BTBD19C9JJ37 291 aa18.03■□□□□ 0.48
CHMP4BP1-201ENST00000556017 EYA2O00167 538 aa18.03■□□□□ 0.48
CHMP4BP1-201ENST00000556017 IRF6O14896 467 aa18.03■□□□□ 0.48
CHMP4BP1-201ENST00000556017 ERO1BQ86YB8 467 aa18.03■□□□□ 0.48
CHMP4BP1-201ENST00000556017 WRNIP1Q96S55 665 aa18.03■□□□□ 0.48
CHMP4BP1-201ENST00000556017 ARHGAP39Q9C0H5 1083 aa18.03■□□□□ 0.48
CHMP4BP1-201ENST00000556017 PTCH2Q9Y6C5 1203 aa18.03■□□□□ 0.48
CHMP4BP1-201ENST00000556017 CEP290O15078 2479 aa18.02■□□□□ 0.48
CHMP4BP1-201ENST00000556017 INPP5BP32019 993 aa18.02■□□□□ 0.48
CHMP4BP1-201ENST00000556017 TRMT2AQ8IZ69 625 aaKnown RBP18.02■□□□□ 0.48
CHMP4BP1-201ENST00000556017 CDCA7LQ96GN5 454 aa18.02■□□□□ 0.48
CHMP4BP1-201ENST00000556017 CSADQ9Y600 493 aa18.02■□□□□ 0.48
CHMP4BP1-201ENST00000556017 AK9Q5TCS8 1911 aa18.02■□□□□ 0.47
CHMP4BP1-201ENST00000556017 E9PSI1 815 aa18.01■□□□□ 0.47
CHMP4BP1-201ENST00000556017 TLR2O60603 784 aa18.01■□□□□ 0.47
CHMP4BP1-201ENST00000556017 FRAT2O75474 233 aaPredicted RBP18.01■□□□□ 0.47
CHMP4BP1-201ENST00000556017 CTGFP29279 349 aa18.01■□□□□ 0.47
CHMP4BP1-201ENST00000556017 NFIAQ12857 509 aa18.01■□□□□ 0.47
CHMP4BP1-201ENST00000556017 MOGSQ13724 837 aa18.01■□□□□ 0.47
CHMP4BP1-201ENST00000556017 DIXDC1Q155Q3 683 aa18.01■□□□□ 0.47
CHMP4BP1-201ENST00000556017 ZFYVE28Q9HCC9 887 aa18.01■□□□□ 0.47
CHMP4BP1-201ENST00000556017 ZNF112Q9UJU3 913 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms