RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 KIF3AQ9Y496 699 aa11.9□□□□□ -0.5
EFCAB11-209ENST00000556005 GYS1P13807 737 aa11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 PDIA3P30101 505 aaKnown RBP11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 HIBADHP31937 336 aaKnown RBP11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 RBM6P78332 1123 aaKnown RBP11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 HMGN5P82970 282 aaKnown RBP11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 GRAPQ13588 217 aa11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 SMARCC2Q8TAQ2 1214 aa11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 GRAPLQ8TC17 118 aaPredicted RBP11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 ARMT1Q9H993 441 aa11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 RAI14Q9P0K7 980 aa11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 LAMA4Q16363 1823 aa11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 C4AP0C0L4 1744 aa11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 WTIPA6NIX2 430 aaPredicted RBP11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 DTNBO60941 627 aa11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 CYP7A1P22680 504 aa11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 ST5P78524 1137 aa11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 PRR5LQ6MZQ0 368 aa11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 NAP1L2Q9ULW6 460 aaPredicted RBP11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 SLC4A4Q9Y6R1 1079 aa11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 DOCK2Q92608 1830 aa11.89□□□□□ -0.51
EFCAB11-209ENST00000556005 MYO5AQ9Y4I1 1855 aaKnown RBP11.88□□□□□ -0.51
EFCAB11-209ENST00000556005 PDS5AQ29RF7 1337 aaKnown RBP11.88□□□□□ -0.51
EFCAB11-209ENST00000556005 DHX16O60231 1041 aaKnown RBP11.88□□□□□ -0.51
EFCAB11-209ENST00000556005 JAK2O60674 1132 aa11.88□□□□□ -0.51
EFCAB11-209ENST00000556005 TXNRD1Q16881 649 aa11.88□□□□□ -0.51
EFCAB11-209ENST00000556005 ZSCAN23Q3MJ62 389 aa11.88□□□□□ -0.51
EFCAB11-209ENST00000556005 CDC37L1Q7L3B6 337 aa11.88□□□□□ -0.51
EFCAB11-209ENST00000556005 GDPD2Q9HCC8 539 aa11.88□□□□□ -0.51
EFCAB11-209ENST00000556005 CNPY2Q9Y2B0 182 aa11.88□□□□□ -0.51
EFCAB11-209ENST00000556005 TAF1P21675 1872 aa11.88□□□□□ -0.51
EFCAB11-209ENST00000556005 CASZ1Q86V15 1759 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 GSG1L2A8MUP6 293 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 H3BQV1 296 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 ZBTB22O15209 634 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 SERPINB2P05120 415 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 ZNF445P59923 1031 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 CCT2P78371 535 aaKnown RBP11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 IFFO2Q5TF58 517 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 TMED8Q6PL24 325 aaPredicted RBP11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 LCORLQ8N3X6 602 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 NSUN7Q8NE18 718 aaKnown RBP11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 RPGRQ92834 1020 aaKnown RBP11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 SYAP1Q96A49 352 aaPredicted RBP11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 DDX11Q96FC9 970 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 NBPF3Q9H094 633 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 CNNM2Q9H8M5 875 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 GRPEL1Q9HAV7 217 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 ANKIB1Q9P2G1 1089 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 LEMD3Q9Y2U8 911 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 MAGEB6P1A0A0J9YX57 407 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 XRCC6P12956 609 aaKnown RBP eCLIP11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 TDO2P48775 406 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 ANTXR2P58335 489 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 DNM1Q05193 864 aaKnown RBP11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 TBC1D10CQ8IV04 446 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 MIGA1Q8NAN2 632 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 TMEM87BQ96K49 555 aa11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 EPB41L4AQ9HCS5 686 aaPredicted RBP11.87□□□□□ -0.51
EFCAB11-209ENST00000556005 A0A1B0GUL6 1792 aa11.86□□□□□ -0.51
EFCAB11-209ENST00000556005 EP400Q96L91 3159 aa11.86□□□□□ -0.51
EFCAB11-209ENST00000556005 KLF18A0A0U1RQI7 1052 aa11.86□□□□□ -0.51
EFCAB11-209ENST00000556005 PTPDC1A2A3K4 754 aa11.86□□□□□ -0.51
EFCAB11-209ENST00000556005 PLSCR1O15162 318 aa11.86□□□□□ -0.51
EFCAB11-209ENST00000556005 CTDNEP1O95476 244 aa11.86□□□□□ -0.51
EFCAB11-209ENST00000556005 UBE2HP62256 183 aa11.86□□□□□ -0.51
EFCAB11-209ENST00000556005 KRT85P78386 507 aa11.86□□□□□ -0.51
EFCAB11-209ENST00000556005 NAA16Q6N069 864 aaPredicted RBP11.86□□□□□ -0.51
EFCAB11-209ENST00000556005 MFSD6Q6ZSS7 791 aa11.86□□□□□ -0.51
EFCAB11-209ENST00000556005 PROM2Q8N271 834 aa11.86□□□□□ -0.51
EFCAB11-209ENST00000556005 KRT23Q9C075 422 aa11.86□□□□□ -0.51
EFCAB11-209ENST00000556005 ZSCAN16Q9H4T2 348 aaPredicted RBP11.86□□□□□ -0.51
EFCAB11-209ENST00000556005 TFCP2L1Q9NZI6 479 aa11.86□□□□□ -0.51
EFCAB11-209ENST00000556005 ANGEL1Q9UNK9 670 aaKnown RBP11.86□□□□□ -0.51
EFCAB11-209ENST00000556005 NSFL1CQ9UNZ2 370 aaKnown RBP11.86□□□□□ -0.51
EFCAB11-209ENST00000556005 UBR3Q6ZT12 1888 aa11.86□□□□□ -0.51
EFCAB11-209ENST00000556005 BRWD3Q6RI45 1802 aa11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 FIBPO43427 364 aa11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 PRKAB2O43741 272 aa11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 IGSF3O75054 1194 aa11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 KLRK1P26718 216 aa11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 CRY2Q49AN0 593 aa11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 AKNAD1Q5T1N1 836 aa11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 FERMT3Q86UX7 667 aa11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 GAS2L3Q86XJ1 694 aa11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 RBM17Q96I25 401 aaKnown RBP11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 NCOA5Q9HCD5 579 aaKnown RBP11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 TMEM63CQ9P1W3 806 aa11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 XDHP47989 1333 aa11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 COL1A1P02452 1464 aaPredicted RBP11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 B4E1Z4 1266 aa11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 GADD45BO75293 160 aaPredicted RBP11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 CYB5R4Q7L1T6 521 aa11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 ADGRA1Q86SQ6 560 aa11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 SCAND2PQ9GZW5 306 aaPredicted RBP11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 RNF41Q9H4P4 317 aaPredicted RBP11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 GPHNQ9NQX3 736 aaPredicted RBP11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 BRPF3Q9ULD4 1205 aa11.85□□□□□ -0.51
EFCAB11-209ENST00000556005 SALL1Q9NSC2 1324 aa11.84□□□□□ -0.51
EFCAB11-209ENST00000556005 GOLGA8BA8MQT2 603 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms