RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 MCM10Q7L590 875 aa16.69■□□□□ 0.26
SIX1-205ENST00000555955 HSD3B7Q9H2F3 369 aa16.69■□□□□ 0.26
SIX1-205ENST00000555955 ODF2LQ9ULJ1 636 aa16.69■□□□□ 0.26
SIX1-205ENST00000555955 CDHR2Q9BYE9 1310 aa16.69■□□□□ 0.26
SIX1-205ENST00000555955 SHOX2O60902 331 aaPredicted RBP16.69■□□□□ 0.26
SIX1-205ENST00000555955 SLC3A2P08195 630 aaKnown RBP16.69■□□□□ 0.26
SIX1-205ENST00000555955 ERCC3P19447 782 aa16.69■□□□□ 0.26
SIX1-205ENST00000555955 AARSP49588 968 aaKnown RBP eCLIP16.69■□□□□ 0.26
SIX1-205ENST00000555955 NDUFA8P51970 172 aa16.69■□□□□ 0.26
SIX1-205ENST00000555955 RIN2Q8WYP3 895 aaPredicted RBP16.69■□□□□ 0.26
SIX1-205ENST00000555955 SIL1Q9H173 461 aa16.69■□□□□ 0.26
SIX1-205ENST00000555955 SHTN1A0MZ66 631 aa16.68■□□□□ 0.26
SIX1-205ENST00000555955 FRMD3A2A2Y4 597 aa16.68■□□□□ 0.26
SIX1-205ENST00000555955 LZTFL1Q9NQ48 299 aa16.68■□□□□ 0.26
SIX1-205ENST00000555955 ZNF142P52746 1687 aaPredicted RBP16.68■□□□□ 0.26
SIX1-205ENST00000555955 NEXMIFQ5QGS0 1516 aa16.68■□□□□ 0.26
SIX1-205ENST00000555955 IKBKBO14920 756 aa16.68■□□□□ 0.26
SIX1-205ENST00000555955 MTX1Q13505 466 aa16.68■□□□□ 0.26
SIX1-205ENST00000555955 FMNL3Q8IVF7 1028 aa16.68■□□□□ 0.26
SIX1-205ENST00000555955 ZNF396Q96N95 335 aaPredicted RBP16.68■□□□□ 0.26
SIX1-205ENST00000555955 VIPAS39Q9H9C1 493 aa16.68■□□□□ 0.26
SIX1-205ENST00000555955 MAP4K1Q92918 833 aa16.67■□□□□ 0.26
SIX1-205ENST00000555955 MRPL44Q9H9J2 332 aaKnown RBP16.67■□□□□ 0.26
SIX1-205ENST00000555955 PCDHA7Q9UN72 937 aa16.67■□□□□ 0.26
SIX1-205ENST00000555955 UBR1Q8IWV7 1749 aa16.67■□□□□ 0.26
SIX1-205ENST00000555955 GLRX3O76003 335 aaKnown RBP16.67■□□□□ 0.26
SIX1-205ENST00000555955 TFRCP02786 760 aaKnown RBP16.67■□□□□ 0.26
SIX1-205ENST00000555955 TUBBP07437 444 aa16.67■□□□□ 0.26
SIX1-205ENST00000555955 KIF4BQ2VIQ3 1234 aa16.67■□□□□ 0.26
SIX1-205ENST00000555955 PREPLQ4J6C6 727 aaPredicted RBP16.67■□□□□ 0.26
SIX1-205ENST00000555955 SSH3Q8TE77 659 aa16.67■□□□□ 0.26
SIX1-205ENST00000555955 TRIM6Q9C030 488 aaPredicted RBP16.67■□□□□ 0.26
SIX1-205ENST00000555955 EHD4Q9H223 541 aa16.67■□□□□ 0.26
SIX1-205ENST00000555955 MIS18AQ9NYP9 233 aa16.67■□□□□ 0.26
SIX1-205ENST00000555955 CHD2O14647 1828 aaKnown RBP16.67■□□□□ 0.26
SIX1-205ENST00000555955 ADKP55263 362 aaKnown RBP16.66■□□□□ 0.26
SIX1-205ENST00000555955 IRX1P78414 480 aaPredicted RBP16.66■□□□□ 0.26
SIX1-205ENST00000555955 FANCLQ9NW38 375 aa16.66■□□□□ 0.26
SIX1-205ENST00000555955 TAF6LQ9Y6J9 622 aa16.66■□□□□ 0.26
SIX1-205ENST00000555955 KLHL33A6NCF5 533 aa16.66■□□□□ 0.26
SIX1-205ENST00000555955 FNTAP49354 379 aa16.66■□□□□ 0.26
SIX1-205ENST00000555955 KIRREL3Q8IZU9 778 aa16.66■□□□□ 0.26
SIX1-205ENST00000555955 FAM76AQ8TAV0 307 aa16.66■□□□□ 0.26
SIX1-205ENST00000555955 CTAGE15A4D2H0 777 aa16.65■□□□□ 0.26
SIX1-205ENST00000555955 CTAGE8P0CG41 777 aa16.65■□□□□ 0.26
SIX1-205ENST00000555955 PDE6BP35913 854 aa16.65■□□□□ 0.26
SIX1-205ENST00000555955 NUTM2DQ5VT03 806 aaPredicted RBP16.65■□□□□ 0.26
SIX1-205ENST00000555955 CTAGE6Q86UF2 777 aa16.65■□□□□ 0.26
SIX1-205ENST00000555955 CTAGE4Q8IX94 777 aa16.65■□□□□ 0.26
SIX1-205ENST00000555955 SAMM50Q9Y512 469 aa16.65■□□□□ 0.26
SIX1-205ENST00000555955 KIF5CO60282 957 aa16.65■□□□□ 0.26
SIX1-205ENST00000555955 UBTFL1P0CB47 393 aaPredicted RBP16.65■□□□□ 0.26
SIX1-205ENST00000555955 PPP1R42Q7Z4L9 355 aa16.65■□□□□ 0.26
SIX1-205ENST00000555955 ALDH8A1Q9H2A2 487 aaPredicted RBP16.65■□□□□ 0.26
SIX1-205ENST00000555955 CCDC175P0C221 793 aa16.65■□□□□ 0.26
SIX1-205ENST00000555955 CRYMQ14894 314 aa16.65■□□□□ 0.26
SIX1-205ENST00000555955 ADALQ6DHV7 355 aa16.65■□□□□ 0.26
SIX1-205ENST00000555955 IQCA1Q86XH1 822 aa16.65■□□□□ 0.26
SIX1-205ENST00000555955 OTUD6BQ8N6M0 293 aa16.65■□□□□ 0.26
SIX1-205ENST00000555955 TC2NQ8N9U0 490 aa16.64■□□□□ 0.25
SIX1-205ENST00000555955 HPCAL4Q9UM19 191 aa16.64■□□□□ 0.25
SIX1-205ENST00000555955 KIAA0754O94854 1291 aa16.64■□□□□ 0.25
SIX1-205ENST00000555955 MYL5Q02045 173 aa16.64■□□□□ 0.25
SIX1-205ENST00000555955 MTF1Q14872 753 aa16.64■□□□□ 0.25
SIX1-205ENST00000555955 ZNF569Q5MCW4 686 aa16.64■□□□□ 0.25
SIX1-205ENST00000555955 AMOTL1Q8IY63 956 aa16.64■□□□□ 0.25
SIX1-205ENST00000555955 NOA1Q8NC60 698 aaKnown RBP16.64■□□□□ 0.25
SIX1-205ENST00000555955 FAM227BQ96M60 508 aa16.64■□□□□ 0.25
SIX1-205ENST00000555955 MINK1Q8N4C8 1332 aaPredicted RBP16.63■□□□□ 0.25
SIX1-205ENST00000555955 MPHOSPH10O00566 681 aaKnown RBP16.63■□□□□ 0.25
SIX1-205ENST00000555955 SKAP2O75563 359 aaPredicted RBP16.63■□□□□ 0.25
SIX1-205ENST00000555955 ZNF202O95125 648 aa16.63■□□□□ 0.25
SIX1-205ENST00000555955 GGCXP38435 758 aa16.63■□□□□ 0.25
SIX1-205ENST00000555955 TUBB2AQ13885 445 aa16.63■□□□□ 0.25
SIX1-205ENST00000555955 ATL3Q6DD88 541 aa16.63■□□□□ 0.25
SIX1-205ENST00000555955 NAA16Q6N069 864 aaPredicted RBP16.63■□□□□ 0.25
SIX1-205ENST00000555955 XAGE2Q96GT9 111 aa16.63■□□□□ 0.25
SIX1-205ENST00000555955 TUBB2BQ9BVA1 445 aa16.63■□□□□ 0.25
SIX1-205ENST00000555955 STK31Q9BXU1 1019 aa16.63■□□□□ 0.25
SIX1-205ENST00000555955 CAPS2Q9BXY5 557 aa16.63■□□□□ 0.25
SIX1-205ENST00000555955 USP44Q9H0E7 712 aa16.63■□□□□ 0.25
SIX1-205ENST00000555955 GOLGA6CA6NDK9 693 aa16.63■□□□□ 0.25
SIX1-205ENST00000555955 GOLGA6DP0CG33 693 aa16.63■□□□□ 0.25
SIX1-205ENST00000555955 STIM1Q13586 685 aa16.63■□□□□ 0.25
SIX1-205ENST00000555955 SF3A1Q15459 793 aaKnown RBP16.63■□□□□ 0.25
SIX1-205ENST00000555955 WDR93Q6P2C0 686 aa16.63■□□□□ 0.25
SIX1-205ENST00000555955 GOLGA6AQ9NYA3 693 aa16.63■□□□□ 0.25
SIX1-205ENST00000555955 CABP1Q9NZU7 370 aa16.63■□□□□ 0.25
SIX1-205ENST00000555955 NEDD4P46934 1319 aa16.62■□□□□ 0.25
SIX1-205ENST00000555955 CTAGE9A4FU28 777 aa16.62■□□□□ 0.25
SIX1-205ENST00000555955 FSBPO95073 299 aa16.62■□□□□ 0.25
SIX1-205ENST00000555955 EIF3HO15372 352 aaKnown RBP eCLIP16.62■□□□□ 0.25
SIX1-205ENST00000555955 CCNHP51946 323 aaPredicted RBP16.62■□□□□ 0.25
SIX1-205ENST00000555955 MRPL12P52815 198 aaKnown RBP16.62■□□□□ 0.25
SIX1-205ENST00000555955 PIP4K2BP78356 416 aa16.62■□□□□ 0.25
SIX1-205ENST00000555955 AKAP17AQ02040 695 aaKnown RBP16.62■□□□□ 0.25
SIX1-205ENST00000555955 TBC1D8BQ0IIM8 1120 aa16.62■□□□□ 0.25
SIX1-205ENST00000555955 FLIIQ13045 1269 aa16.62■□□□□ 0.25
SIX1-205ENST00000555955 TBX2Q13207 712 aaPredicted RBP16.62■□□□□ 0.25
SIX1-205ENST00000555955 BORCS6Q96GS4 357 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms