RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 TMEM88BA6NKF7 163 aa8□□□□□ -1.13
SNX6-204ENST00000555541 USP11P51784 963 aa8□□□□□ -1.13
SNX6-204ENST00000555541 DNM1Q05193 864 aaKnown RBP8□□□□□ -1.13
SNX6-204ENST00000555541 ZNF792Q3KQV3 632 aa8□□□□□ -1.13
SNX6-204ENST00000555541 NOM1Q5C9Z4 860 aaKnown RBP8□□□□□ -1.13
SNX6-204ENST00000555541 ZNF574Q6ZN55 896 aaPredicted RBP8□□□□□ -1.13
SNX6-204ENST00000555541 ZNF765Q7L2R6 523 aa8□□□□□ -1.13
SNX6-204ENST00000555541 CILP2Q8IUL8 1156 aa8□□□□□ -1.13
SNX6-204ENST00000555541 ZKSCAN3Q9BRR0 538 aa8□□□□□ -1.13
SNX6-204ENST00000555541 RPLP1P05386 114 aaKnown RBP7.99□□□□□ -1.13
SNX6-204ENST00000555541 ESRRAP11474 423 aaPredicted RBP7.99□□□□□ -1.13
SNX6-204ENST00000555541 NPR3P17342 541 aa7.99□□□□□ -1.13
SNX6-204ENST00000555541 SSFA2P28290 1259 aa7.99□□□□□ -1.13
SNX6-204ENST00000555541 MZF1P28698 734 aaPredicted RBP7.99□□□□□ -1.13
SNX6-204ENST00000555541 EIF1AXP47813 144 aaKnown RBP7.99□□□□□ -1.13
SNX6-204ENST00000555541 BHLHE41Q9C0J9 482 aaPredicted RBP7.99□□□□□ -1.13
SNX6-204ENST00000555541 SERPINA10Q9UK55 444 aa7.99□□□□□ -1.13
SNX6-204ENST00000555541 ACTL7BQ9Y614 415 aa7.99□□□□□ -1.13
SNX6-204ENST00000555541 ADH5P11766 374 aa7.98□□□□□ -1.13
SNX6-204ENST00000555541 MPSTP25325 297 aa7.98□□□□□ -1.13
SNX6-204ENST00000555541 LCE5AQ5TCM9 118 aa7.98□□□□□ -1.13
SNX6-204ENST00000555541 GLIS3Q8NEA6 775 aa7.98□□□□□ -1.13
SNX6-204ENST00000555541 GTF3C2Q8WUA4 911 aaPredicted RBP7.98□□□□□ -1.13
SNX6-204ENST00000555541 OSMRQ99650 979 aa7.98□□□□□ -1.13
SNX6-204ENST00000555541 SEMA6CQ9H3T2 930 aa7.98□□□□□ -1.13
SNX6-204ENST00000555541 C1GALT1Q9NS00 363 aa7.98□□□□□ -1.13
SNX6-204ENST00000555541 NFICP08651 508 aa7.97□□□□□ -1.13
SNX6-204ENST00000555541 CCER1Q8TC90 406 aaPredicted RBP7.97□□□□□ -1.13
SNX6-204ENST00000555541 GSX1Q9H4S2 264 aaPredicted RBP7.97□□□□□ -1.13
SNX6-204ENST00000555541 ACSS3Q9H6R3 686 aa7.97□□□□□ -1.13
SNX6-204ENST00000555541 EREGO14944 169 aa7.96□□□□□ -1.14
SNX6-204ENST00000555541 CTSBP07858 339 aa7.96□□□□□ -1.14
SNX6-204ENST00000555541 MTMR3Q13615 1198 aa7.96□□□□□ -1.14
SNX6-204ENST00000555541 DUSP27Q5VZP5 1158 aa7.96□□□□□ -1.14
SNX6-204ENST00000555541 PHLDB3Q6NSJ2 640 aa7.96□□□□□ -1.14
SNX6-204ENST00000555541 PMEPA1Q969W9 287 aa7.96□□□□□ -1.14
SNX6-204ENST00000555541 LRRC4CQ9HCJ2 640 aa7.96□□□□□ -1.14
SNX6-204ENST00000555541 POLIQ9UNA4 740 aa7.96□□□□□ -1.14
SNX6-204ENST00000555541 SLC5A6Q9Y289 635 aa7.96□□□□□ -1.14
SNX6-204ENST00000555541 ARID3CA6NKF2 412 aa7.95□□□□□ -1.14
SNX6-204ENST00000555541 C8orf34Q49A92 452 aa7.95□□□□□ -1.14
SNX6-204ENST00000555541 ATG4DQ86TL0 474 aaPredicted RBP7.95□□□□□ -1.14
SNX6-204ENST00000555541 CCDC97Q96F63 343 aaPredicted RBP7.95□□□□□ -1.14
SNX6-204ENST00000555541 DYNC1LI2O43237 492 aaPredicted RBP7.94□□□□□ -1.14
SNX6-204ENST00000555541 TNFRSF21O75509 655 aa7.94□□□□□ -1.14
SNX6-204ENST00000555541 FARP2O94887 1054 aaPredicted RBP7.94□□□□□ -1.14
SNX6-204ENST00000555541 CYP27A1Q02318 531 aa7.94□□□□□ -1.14
SNX6-204ENST00000555541 MESP2Q0VG99 397 aa7.94□□□□□ -1.14
SNX6-204ENST00000555541 PEAR1Q5VY43 1037 aaPredicted RBP7.94□□□□□ -1.14
SNX6-204ENST00000555541 YIPF2Q9BWQ6 316 aa7.94□□□□□ -1.14
SNX6-204ENST00000555541 KRTAP17-1Q9BYP8 105 aa7.94□□□□□ -1.14
SNX6-204ENST00000555541 FAM105AQ9NUU6 356 aa7.94□□□□□ -1.14
SNX6-204ENST00000555541 ADAMTS6Q9UKP5 1117 aa7.94□□□□□ -1.14
SNX6-204ENST00000555541 BIN1O00499 593 aa7.93□□□□□ -1.14
SNX6-204ENST00000555541 FZD6O60353 706 aa7.93□□□□□ -1.14
SNX6-204ENST00000555541 MAP7Q14244 749 aa7.93□□□□□ -1.14
SNX6-204ENST00000555541 PLCL1Q15111 1095 aa7.93□□□□□ -1.14
SNX6-204ENST00000555541 MBNL3Q9NUK0 354 aaKnown RBP7.93□□□□□ -1.14
SNX6-204ENST00000555541 FUT4P22083 530 aa7.92□□□□□ -1.14
SNX6-204ENST00000555541 OGFOD3Q6PK18 319 aa7.92□□□□□ -1.14
SNX6-204ENST00000555541 TMEM40Q8WWA1 233 aa7.92□□□□□ -1.14
SNX6-204ENST00000555541 FOXD3Q9UJU5 478 aaPredicted RBP7.92□□□□□ -1.14
SNX6-204ENST00000555541 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.91□□□□□ -1.14
SNX6-204ENST00000555541 RNASE1P07998 156 aaKnown RBP7.91□□□□□ -1.14
SNX6-204ENST00000555541 PCSK2P16519 638 aa7.91□□□□□ -1.14
SNX6-204ENST00000555541 GSTM4Q03013 218 aa7.91□□□□□ -1.14
SNX6-204ENST00000555541 BNIP3Q12983 259 aa7.91□□□□□ -1.14
SNX6-204ENST00000555541 KRTAP19-4Q3LI73 84 aa7.91□□□□□ -1.14
SNX6-204ENST00000555541 ALKBH2Q6NS38 261 aa7.91□□□□□ -1.14
SNX6-204ENST00000555541 STK11IPQ8N1F8 1099 aa7.91□□□□□ -1.14
SNX6-204ENST00000555541 FAM168AQ92567 244 aa7.91□□□□□ -1.14
SNX6-204ENST00000555541 LATS2Q9NRM7 1088 aa7.91□□□□□ -1.14
SNX6-204ENST00000555541 CARNS1A5YM72 827 aa7.89□□□□□ -1.15
SNX6-204ENST00000555541 METTL12A8MUP2 240 aa7.89□□□□□ -1.15
SNX6-204ENST00000555541 CD8BP10966 210 aa7.89□□□□□ -1.15
SNX6-204ENST00000555541 RAB6AP20340 208 aa7.89□□□□□ -1.15
SNX6-204ENST00000555541 ZNF423Q2M1K9 1284 aa7.89□□□□□ -1.15
SNX6-204ENST00000555541 GJD3Q8N144 294 aa7.89□□□□□ -1.15
SNX6-204ENST00000555541 MISP3Q96FF7 219 aa7.89□□□□□ -1.15
SNX6-204ENST00000555541 ZFYVE28Q9HCC9 887 aa7.89□□□□□ -1.15
SNX6-204ENST00000555541 CCDC87Q9NVE4 849 aa7.89□□□□□ -1.15
SNX6-204ENST00000555541 U3KQE9 123 aa7.89□□□□□ -1.15
SNX6-204ENST00000555541 PHACTR2O75167 634 aa7.88□□□□□ -1.15
SNX6-204ENST00000555541 EDN3P14138 238 aa7.88□□□□□ -1.15
SNX6-204ENST00000555541 MAOBP27338 520 aa7.88□□□□□ -1.15
SNX6-204ENST00000555541 ECM1Q16610 540 aa7.88□□□□□ -1.15
SNX6-204ENST00000555541 ASAP3Q8TDY4 903 aa7.88□□□□□ -1.15
SNX6-204ENST00000555541 SNX29Q8TEQ0 813 aa7.88□□□□□ -1.15
SNX6-204ENST00000555541 TRIM56Q9BRZ2 755 aaKnown RBP7.87□□□□□ -1.15
SNX6-204ENST00000555541 KRTAP9-3Q9BYQ3 159 aa7.87□□□□□ -1.15
SNX6-204ENST00000555541 C1orf115Q9H7X2 142 aa7.87□□□□□ -1.15
SNX6-204ENST00000555541 RC3H2Q9HBD1 1191 aaKnown RBP7.87□□□□□ -1.15
SNX6-204ENST00000555541 EIF4EBP3O60516 100 aaPredicted RBP7.86□□□□□ -1.15
SNX6-204ENST00000555541 FAM13AO94988 1023 aa7.86□□□□□ -1.15
SNX6-204ENST00000555541 ECEL1O95672 775 aa7.86□□□□□ -1.15
SNX6-204ENST00000555541 FKBP4Q02790 459 aaKnown RBP eCLIP7.86□□□□□ -1.15
SNX6-204ENST00000555541 EHHADHQ08426 723 aa7.86□□□□□ -1.15
SNX6-204ENST00000555541 DYMQ7RTS9 669 aa7.86□□□□□ -1.15
SNX6-204ENST00000555541 C1QL4Q86Z23 238 aa7.86□□□□□ -1.15
SNX6-204ENST00000555541 PLD6Q8N2A8 252 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms