RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 ANKIB1Q9P2G1 1089 aa17.13■□□□□ 0.33
IFT43-209ENST00000555305 COL4A1P02462 1669 aa17.12■□□□□ 0.33
IFT43-209ENST00000555305 KLRG2A4D1S0 409 aaPredicted RBP17.12■□□□□ 0.33
IFT43-209ENST00000555305 F13A1P00488 732 aa17.12■□□□□ 0.33
IFT43-209ENST00000555305 CYP7A1P22680 504 aa17.12■□□□□ 0.33
IFT43-209ENST00000555305 ST3GAL1Q11201 340 aa17.12■□□□□ 0.33
IFT43-209ENST00000555305 MB21D2Q8IYB1 491 aaPredicted RBP17.12■□□□□ 0.33
IFT43-209ENST00000555305 IFNL3Q8IZI9 196 aa17.12■□□□□ 0.33
IFT43-209ENST00000555305 PROM2Q8N271 834 aa17.12■□□□□ 0.33
IFT43-209ENST00000555305 CRAMP1Q96RY5 1269 aa17.12■□□□□ 0.33
IFT43-209ENST00000555305 MTA3Q9BTC8 594 aa17.12■□□□□ 0.33
IFT43-209ENST00000555305 LMBRD1Q9NUN5 540 aa17.12■□□□□ 0.33
IFT43-209ENST00000555305 ABCF2Q9UG63 623 aa17.12■□□□□ 0.33
IFT43-209ENST00000555305 TNRC6CQ9HCJ0 1690 aaKnown RBP17.12■□□□□ 0.33
IFT43-209ENST00000555305 POLRMTO00411 1230 aaKnown RBP17.12■□□□□ 0.33
IFT43-209ENST00000555305 ZNF804AQ7Z570 1209 aa17.12■□□□□ 0.33
IFT43-209ENST00000555305 AKT1S1Q96B36 256 aa17.12■□□□□ 0.33
IFT43-209ENST00000555305 TMEM87BQ96K49 555 aa17.12■□□□□ 0.33
IFT43-209ENST00000555305 KRT23Q9C075 422 aa17.12■□□□□ 0.33
IFT43-209ENST00000555305 RNF41Q9H4P4 317 aaPredicted RBP17.12■□□□□ 0.33
IFT43-209ENST00000555305 SALL1Q9NSC2 1324 aa17.11■□□□□ 0.33
IFT43-209ENST00000555305 MAGEB6P1A0A0J9YX57 407 aa17.11■□□□□ 0.33
IFT43-209ENST00000555305 PRC1O43663 620 aa17.11■□□□□ 0.33
IFT43-209ENST00000555305 ATP2B4P23634 1241 aa17.11■□□□□ 0.33
IFT43-209ENST00000555305 HAND2P61296 217 aa17.11■□□□□ 0.33
IFT43-209ENST00000555305 NAA16Q6N069 864 aaPredicted RBP17.11■□□□□ 0.33
IFT43-209ENST00000555305 GIMAP6Q6P9H5 292 aa17.11■□□□□ 0.33
IFT43-209ENST00000555305 TMEM87AQ8NBN3 555 aa17.11■□□□□ 0.33
IFT43-209ENST00000555305 RGS22Q8NE09 1264 aa17.11■□□□□ 0.33
IFT43-209ENST00000555305 RGPD3A6NKT7 1758 aaPredicted RBP17.1■□□□□ 0.33
IFT43-209ENST00000555305 RGPD4Q7Z3J3 1758 aa17.1■□□□□ 0.33
IFT43-209ENST00000555305 PCP11498 1178 aaKnown RBP17.1■□□□□ 0.33
IFT43-209ENST00000555305 WDR66Q8TBY9 1149 aa17.1■□□□□ 0.33
IFT43-209ENST00000555305 MTMR6Q9Y217 621 aa17.1■□□□□ 0.33
IFT43-209ENST00000555305 SLC4A4Q9Y6R1 1079 aa17.1■□□□□ 0.33
IFT43-209ENST00000555305 GSG1L2A8MUP6 293 aa17.1■□□□□ 0.33
IFT43-209ENST00000555305 PRPF40AO75400 957 aaKnown RBP17.1■□□□□ 0.33
IFT43-209ENST00000555305 TDO2P48775 406 aa17.1■□□□□ 0.33
IFT43-209ENST00000555305 NT5C2P49902 561 aa17.1■□□□□ 0.33
IFT43-209ENST00000555305 STK3Q13188 491 aa17.1■□□□□ 0.33
IFT43-209ENST00000555305 CERS3Q8IU89 383 aa17.1■□□□□ 0.33
IFT43-209ENST00000555305 CCDC24Q8N4L8 307 aa17.1■□□□□ 0.33
IFT43-209ENST00000555305 FAM184AQ8NB25 1140 aa17.1■□□□□ 0.33
IFT43-209ENST00000555305 SMARCC2Q8TAQ2 1214 aa17.1■□□□□ 0.33
IFT43-209ENST00000555305 ARMT1Q9H993 441 aa17.1■□□□□ 0.33
IFT43-209ENST00000555305 DUOX1Q9NRD9 1551 aa17.09■□□□□ 0.33
IFT43-209ENST00000555305 SCRN1Q12765 414 aa17.09■□□□□ 0.33
IFT43-209ENST00000555305 BRIP1Q9BX63 1249 aa17.09■□□□□ 0.33
IFT43-209ENST00000555305 PODXL2Q9NZ53 605 aa17.09■□□□□ 0.33
IFT43-209ENST00000555305 LAMA4Q16363 1823 aa17.09■□□□□ 0.33
IFT43-209ENST00000555305 IRS2Q9Y4H2 1338 aa17.09■□□□□ 0.33
IFT43-209ENST00000555305 PDIA3P30101 505 aaKnown RBP17.08■□□□□ 0.33
IFT43-209ENST00000555305 APOBRQ0VD83 1088 aa17.08■□□□□ 0.33
IFT43-209ENST00000555305 COL9A3Q14050 684 aaPredicted RBP17.08■□□□□ 0.33
IFT43-209ENST00000555305 LCORLQ8N3X6 602 aa17.08■□□□□ 0.33
IFT43-209ENST00000555305 STAG1Q8WVM7 1258 aa17.08■□□□□ 0.33
IFT43-209ENST00000555305 SYAP1Q96A49 352 aaPredicted RBP17.08■□□□□ 0.33
IFT43-209ENST00000555305 ANGEL1Q9UNK9 670 aaKnown RBP17.08■□□□□ 0.33
IFT43-209ENST00000555305 IQSEC3Q9UPP2 1182 aaPredicted RBP17.08■□□□□ 0.33
IFT43-209ENST00000555305 COL1A1P02452 1464 aaPredicted RBP17.08■□□□□ 0.32
IFT43-209ENST00000555305 VPS37CA5D8V6 355 aaPredicted RBP17.07■□□□□ 0.32
IFT43-209ENST00000555305 GOLGA6L3A6NEY3 463 aa17.07■□□□□ 0.32
IFT43-209ENST00000555305 GSTO1P78417 241 aa17.07■□□□□ 0.32
IFT43-209ENST00000555305 DDR1Q08345 913 aa17.07■□□□□ 0.32
IFT43-209ENST00000555305 SART3Q15020 963 aaKnown RBP17.07■□□□□ 0.32
IFT43-209ENST00000555305 AKNAD1Q5T1N1 836 aa17.07■□□□□ 0.32
IFT43-209ENST00000555305 FOXD4L5Q5VV16 416 aaPredicted RBP17.07■□□□□ 0.32
IFT43-209ENST00000555305 MFSD6Q6ZSS7 791 aa17.07■□□□□ 0.32
IFT43-209ENST00000555305 KLHL34Q8N239 644 aa17.07■□□□□ 0.32
IFT43-209ENST00000555305 FOXD4L4Q8WXT5 416 aaPredicted RBP17.07■□□□□ 0.32
IFT43-209ENST00000555305 LRRC2Q9BYS8 371 aa17.07■□□□□ 0.32
IFT43-209ENST00000555305 ZSCAN16Q9H4T2 348 aaPredicted RBP17.07■□□□□ 0.32
IFT43-209ENST00000555305 A0A0G2JLW4 131 aa17.07■□□□□ 0.32
IFT43-209ENST00000555305 TBC1D10CQ8IV04 446 aa17.07■□□□□ 0.32
IFT43-209ENST00000555305 NSUN4Q96CB9 384 aaKnown RBP17.07■□□□□ 0.32
IFT43-209ENST00000555305 EPB41L4AQ9HCS5 686 aaPredicted RBP17.07■□□□□ 0.32
IFT43-209ENST00000555305 ANAPC4Q9UJX5 808 aa17.07■□□□□ 0.32
IFT43-209ENST00000555305 GGA1Q9UJY5 639 aa17.07■□□□□ 0.32
IFT43-209ENST00000555305 TIAM2Q8IVF5 1701 aa17.06■□□□□ 0.32
IFT43-209ENST00000555305 PDE6BP35913 854 aa17.06■□□□□ 0.32
IFT43-209ENST00000555305 TMTC2Q8N394 836 aa17.06■□□□□ 0.32
IFT43-209ENST00000555305 TDRD7Q8NHU6 1098 aaKnown RBP17.06■□□□□ 0.32
IFT43-209ENST00000555305 RIOK1Q9BRS2 568 aaKnown RBP17.06■□□□□ 0.32
IFT43-209ENST00000555305 GZF1Q9H116 711 aaPredicted RBP17.06■□□□□ 0.32
IFT43-209ENST00000555305 H3BQV1 296 aa17.05■□□□□ 0.32
IFT43-209ENST00000555305 CDKL5O76039 1030 aa17.05■□□□□ 0.32
IFT43-209ENST00000555305 LIFRP42702 1097 aa17.05■□□□□ 0.32
IFT43-209ENST00000555305 IFFO2Q5TF58 517 aa17.05■□□□□ 0.32
IFT43-209ENST00000555305 CPLX2Q6PUV4 134 aaKnown RBP17.05■□□□□ 0.32
IFT43-209ENST00000555305 NSUN7Q8NE18 718 aaKnown RBP17.05■□□□□ 0.32
IFT43-209ENST00000555305 CRNKL1Q9BZJ0 848 aaKnown RBP17.05■□□□□ 0.32
IFT43-209ENST00000555305 NBPF3Q9H094 633 aa17.05■□□□□ 0.32
IFT43-209ENST00000555305 TMX4Q9H1E5 349 aaPredicted RBP17.05■□□□□ 0.32
IFT43-209ENST00000555305 PARP3Q9Y6F1 533 aa17.05■□□□□ 0.32
IFT43-209ENST00000555305 TAF1P21675 1872 aa17.05■□□□□ 0.32
IFT43-209ENST00000555305 MAST2Q6P0Q8 1798 aa17.05■□□□□ 0.32
IFT43-209ENST00000555305 NPR1P16066 1061 aa17.05■□□□□ 0.32
IFT43-209ENST00000555305 ALDH1B1P30837 517 aa17.05■□□□□ 0.32
IFT43-209ENST00000555305 ANTXR2P58335 489 aa17.05■□□□□ 0.32
IFT43-209ENST00000555305 KRT85P78386 507 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms