RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 SPDYE2BA6NHP3 402 aa15.21■□□□□ 0.03
SYNE2-214ENST00000554928 SMARCA5O60264 1052 aaPredicted RBP15.21■□□□□ 0.03
SYNE2-214ENST00000554928 SPDYE6P0CI01 402 aa15.21■□□□□ 0.03
SYNE2-214ENST00000554928 ATXN8OSP0DMR3 200 aa15.21■□□□□ 0.03
SYNE2-214ENST00000554928 ARID4AP29374 1257 aaPredicted RBP15.21■□□□□ 0.03
SYNE2-214ENST00000554928 CRKP46108 304 aa15.21■□□□□ 0.03
SYNE2-214ENST00000554928 DLGAP5Q15398 846 aa15.21■□□□□ 0.03
SYNE2-214ENST00000554928 DIXDC1Q155Q3 683 aa15.21■□□□□ 0.03
SYNE2-214ENST00000554928 GORABQ5T7V8 394 aa15.21■□□□□ 0.03
SYNE2-214ENST00000554928 POTEHQ6S545 545 aa15.21■□□□□ 0.03
SYNE2-214ENST00000554928 TBC1D9Q6ZT07 1266 aa15.21■□□□□ 0.03
SYNE2-214ENST00000554928 CDC37L1Q7L3B6 337 aa15.21■□□□□ 0.03
SYNE2-214ENST00000554928 AACSQ86V21 672 aa15.21■□□□□ 0.03
SYNE2-214ENST00000554928 MTMR14Q8NCE2 650 aa15.21■□□□□ 0.03
SYNE2-214ENST00000554928 TBC1D22AQ8WUA7 517 aa15.21■□□□□ 0.03
SYNE2-214ENST00000554928 DCPSQ96C86 337 aaKnown RBP15.21■□□□□ 0.03
SYNE2-214ENST00000554928 SNRKQ9NRH2 765 aa15.21■□□□□ 0.03
SYNE2-214ENST00000554928 GNL3LQ9NVN8 582 aaKnown RBP15.21■□□□□ 0.03
SYNE2-214ENST00000554928 DENND2AQ9ULE3 1009 aa15.21■□□□□ 0.03
SYNE2-214ENST00000554928 SEMA3EO15041 775 aa15.2■□□□□ 0.02
SYNE2-214ENST00000554928 RBM5P52756 815 aaKnown RBP eCLIP15.2■□□□□ 0.02
SYNE2-214ENST00000554928 DNAJC5GQ8N7S2 189 aa15.2■□□□□ 0.02
SYNE2-214ENST00000554928 WDR66Q8TBY9 1149 aa15.2■□□□□ 0.02
SYNE2-214ENST00000554928 ZNF408Q9H9D4 720 aa15.2■□□□□ 0.02
SYNE2-214ENST00000554928 NDUFB9Q9Y6M9 179 aa15.2■□□□□ 0.02
SYNE2-214ENST00000554928 TMEM88BA6NKF7 163 aa15.19■□□□□ 0.02
SYNE2-214ENST00000554928 CELF2O95319 508 aaKnown RBP15.19■□□□□ 0.02
SYNE2-214ENST00000554928 ERC1Q8IUD2 1116 aa15.19■□□□□ 0.02
SYNE2-214ENST00000554928 ZNF384Q8TF68 577 aa15.19■□□□□ 0.02
SYNE2-214ENST00000554928 KIF1BPQ96EK5 621 aa15.19■□□□□ 0.02
SYNE2-214ENST00000554928 CDCA5Q96FF9 252 aa15.19■□□□□ 0.02
SYNE2-214ENST00000554928 TDRD3Q9H7E2 651 aaKnown RBP15.19■□□□□ 0.02
SYNE2-214ENST00000554928 SERPINA10Q9UK55 444 aa15.19■□□□□ 0.02
SYNE2-214ENST00000554928 SALL1Q9NSC2 1324 aa15.18■□□□□ 0.02
SYNE2-214ENST00000554928 HSP90AB4PQ58FF6 505 aa15.18■□□□□ 0.02
SYNE2-214ENST00000554928 TTC39AQ5SRH9 613 aa15.18■□□□□ 0.02
SYNE2-214ENST00000554928 APOBEC3HQ6NTF7 200 aaKnown RBP15.18■□□□□ 0.02
SYNE2-214ENST00000554928 SULF1Q8IWU6 871 aa15.18■□□□□ 0.02
SYNE2-214ENST00000554928 SPATA5Q8NB90 893 aa15.18■□□□□ 0.02
SYNE2-214ENST00000554928 DCTPP1Q9H773 170 aa15.18■□□□□ 0.02
SYNE2-214ENST00000554928 CREBZFQ9NS37 354 aa15.18■□□□□ 0.02
SYNE2-214ENST00000554928 ABCF2Q9UG63 623 aa15.18■□□□□ 0.02
SYNE2-214ENST00000554928 POLR2AP24928 1970 aaKnown RBP15.18■□□□□ 0.02
SYNE2-214ENST00000554928 PITPNM2Q9BZ72 1349 aa15.17■□□□□ 0.02
SYNE2-214ENST00000554928 RAB11FIP3O75154 756 aa15.17■□□□□ 0.02
SYNE2-214ENST00000554928 LDHBP07195 334 aaKnown RBP15.17■□□□□ 0.02
SYNE2-214ENST00000554928 ZAP70P43403 619 aa15.17■□□□□ 0.02
SYNE2-214ENST00000554928 MMP14P50281 582 aa15.17■□□□□ 0.02
SYNE2-214ENST00000554928 CACNB3P54284 484 aa15.17■□□□□ 0.02
SYNE2-214ENST00000554928 CDAN1Q8IWY9 1227 aa15.17■□□□□ 0.02
SYNE2-214ENST00000554928 ZNF70Q9UC06 446 aaPredicted RBP15.17■□□□□ 0.02
SYNE2-214ENST00000554928 MKRN1Q9UHC7 482 aaKnown RBP15.17■□□□□ 0.02
SYNE2-214ENST00000554928 DAGLAQ9Y4D2 1042 aa15.17■□□□□ 0.02
SYNE2-214ENST00000554928 MYH13Q9UKX3 1938 aa15.17■□□□□ 0.02
SYNE2-214ENST00000554928 PDS5AQ29RF7 1337 aaKnown RBP15.17■□□□□ 0.02
SYNE2-214ENST00000554928 CYP2E1P05181 493 aaPredicted RBP15.16■□□□□ 0.02
SYNE2-214ENST00000554928 UQCRFS1P1P0C7P4 283 aa15.16■□□□□ 0.02
SYNE2-214ENST00000554928 SPDYE2Q495Y8 402 aa15.16■□□□□ 0.02
SYNE2-214ENST00000554928 CCDC158Q5M9N0 1113 aa15.16■□□□□ 0.02
SYNE2-214ENST00000554928 MOB2Q70IA6 237 aa15.16■□□□□ 0.02
SYNE2-214ENST00000554928 TEKT1Q969V4 418 aa15.16■□□□□ 0.02
SYNE2-214ENST00000554928 VEZTQ9HBM0 779 aa15.16■□□□□ 0.02
SYNE2-214ENST00000554928 PIH1D3Q9NQM4 214 aaKnown RBP15.16■□□□□ 0.02
SYNE2-214ENST00000554928 FZD1Q9UP38 647 aa15.16■□□□□ 0.02
SYNE2-214ENST00000554928 SUGT1Q9Y2Z0 365 aa15.16■□□□□ 0.02
SYNE2-214ENST00000554928 HDLBPQ00341 1268 aaKnown RBP15.15■□□□□ 0.02
SYNE2-214ENST00000554928 HHIPL2Q6UWX4 724 aa15.15■□□□□ 0.02
SYNE2-214ENST00000554928 CLASRPQ8N2M8 674 aaKnown RBP15.15■□□□□ 0.02
SYNE2-214ENST00000554928 ZNF512BQ96KM6 892 aaPredicted RBP15.15■□□□□ 0.02
SYNE2-214ENST00000554928 ZDHHC15Q96MV8 337 aa15.15■□□□□ 0.02
SYNE2-214ENST00000554928 ANTXR1Q9H6X2 564 aa15.15■□□□□ 0.02
SYNE2-214ENST00000554928 TCP10L2B9ZVM9 353 aa15.14■□□□□ 0.01
SYNE2-214ENST00000554928 MECOMQ03112 1051 aa15.14■□□□□ 0.01
SYNE2-214ENST00000554928 APOBEC3FQ8IUX4 373 aaKnown RBP15.14■□□□□ 0.01
SYNE2-214ENST00000554928 LRRCC1Q9C099 1032 aa15.14■□□□□ 0.01
SYNE2-214ENST00000554928 DEFB129Q9H1M3 183 aa15.14■□□□□ 0.01
SYNE2-214ENST00000554928 ABT1Q9ULW3 272 aaKnown RBP15.14■□□□□ 0.01
SYNE2-214ENST00000554928 SSC5DA1L4H1 1573 aa15.14■□□□□ 0.01
SYNE2-214ENST00000554928 AKAP11Q9UKA4 1901 aa15.13■□□□□ 0.01
SYNE2-214ENST00000554928 CNTNAP1P78357 1384 aa15.13■□□□□ 0.01
SYNE2-214ENST00000554928 IFIT2P09913 472 aaKnown RBP15.13■□□□□ 0.01
SYNE2-214ENST00000554928 RASA3Q14644 834 aa15.13■□□□□ 0.01
SYNE2-214ENST00000554928 TSHZ3Q63HK5 1081 aa15.13■□□□□ 0.01
SYNE2-214ENST00000554928 CDC42EP5Q6NZY7 148 aa15.13■□□□□ 0.01
SYNE2-214ENST00000554928 ERICH6Q7L0X2 663 aa15.13■□□□□ 0.01
SYNE2-214ENST00000554928 OTUD7AQ8TE49 926 aaPredicted RBP15.13■□□□□ 0.01
SYNE2-214ENST00000554928 NSUN4Q96CB9 384 aaKnown RBP15.13■□□□□ 0.01
SYNE2-214ENST00000554928 KLRG1Q96E93 195 aa15.13■□□□□ 0.01
SYNE2-214ENST00000554928 EDC3Q96F86 508 aaKnown RBP15.13■□□□□ 0.01
SYNE2-214ENST00000554928 MRIQ9BWK5 157 aa15.13■□□□□ 0.01
SYNE2-214ENST00000554928 TLL2Q9Y6L7 1015 aa15.13■□□□□ 0.01
SYNE2-214ENST00000554928 GAKO14976 1311 aa15.13■□□□□ 0.01
SYNE2-214ENST00000554928 MAST3O60307 1309 aa15.13■□□□□ 0.01
SYNE2-214ENST00000554928 TRPM7Q96QT4 1865 aa15.12■□□□□ 0.01
SYNE2-214ENST00000554928 RASSF10A6NK89 507 aa15.12■□□□□ 0.01
SYNE2-214ENST00000554928 IGHDP01880 384 aa15.12■□□□□ 0.01
SYNE2-214ENST00000554928 VEGFBP49765 207 aa15.12■□□□□ 0.01
SYNE2-214ENST00000554928 NFIAQ12857 509 aa15.12■□□□□ 0.01
SYNE2-214ENST00000554928 ADGRA1Q86SQ6 560 aa15.12■□□□□ 0.01
SYNE2-214ENST00000554928 SAPCD2Q86UD0 394 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms