RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 FAM227BQ96M60 508 aa17.28■□□□□ 0.36
SHOX2-206ENST00000554685 FER1L6Q2WGJ9 1857 aa17.28■□□□□ 0.36
SHOX2-206ENST00000554685 ZNF532Q9HCE3 1301 aa17.27■□□□□ 0.36
SHOX2-206ENST00000554685 LDHCP07864 332 aa17.27■□□□□ 0.36
SHOX2-206ENST00000554685 ANO2Q9NQ90 1003 aa17.27■□□□□ 0.36
SHOX2-206ENST00000554685 ZNRF3Q9ULT6 936 aa17.27■□□□□ 0.36
SHOX2-206ENST00000554685 CCDC171Q6TFL3 1326 aa17.26■□□□□ 0.35
SHOX2-206ENST00000554685 MYO3BQ8WXR4 1341 aa17.26■□□□□ 0.35
SHOX2-206ENST00000554685 TCRBV5S4A2TA0A5A2 114 aa17.26■□□□□ 0.35
SHOX2-206ENST00000554685 CYP7A1P22680 504 aa17.26■□□□□ 0.35
SHOX2-206ENST00000554685 PRDX5P30044 214 aa17.26■□□□□ 0.35
SHOX2-206ENST00000554685 ARHGAP27Q6ZUM4 889 aa17.26■□□□□ 0.35
SHOX2-206ENST00000554685 CERS3Q8IU89 383 aa17.26■□□□□ 0.35
SHOX2-206ENST00000554685 NSUN4Q96CB9 384 aaKnown RBP17.26■□□□□ 0.35
SHOX2-206ENST00000554685 JAG2Q9Y219 1238 aa17.26■□□□□ 0.35
SHOX2-206ENST00000554685 MAST2Q6P0Q8 1798 aa17.25■□□□□ 0.35
SHOX2-206ENST00000554685 SEC24BO95487 1268 aa17.25■□□□□ 0.35
SHOX2-206ENST00000554685 MCCP23508 829 aa17.25■□□□□ 0.35
SHOX2-206ENST00000554685 MECOMQ03112 1051 aa17.25■□□□□ 0.35
SHOX2-206ENST00000554685 MYH7P12883 1935 aa17.24■□□□□ 0.35
SHOX2-206ENST00000554685 DACT2Q5SW24 774 aa17.24■□□□□ 0.35
SHOX2-206ENST00000554685 OSBP2Q969R2 916 aa17.24■□□□□ 0.35
SHOX2-206ENST00000554685 AIDAQ96BJ3 306 aa17.24■□□□□ 0.35
SHOX2-206ENST00000554685 NOL10Q9BSC4 688 aaKnown RBP17.24■□□□□ 0.35
SHOX2-206ENST00000554685 YDJCA8MPS7 323 aa17.23■□□□□ 0.35
SHOX2-206ENST00000554685 GNAT2P19087 354 aa17.23■□□□□ 0.35
SHOX2-206ENST00000554685 LMNB1P20700 586 aa17.23■□□□□ 0.35
SHOX2-206ENST00000554685 RASSF7Q02833 373 aa17.23■□□□□ 0.35
SHOX2-206ENST00000554685 TNIP1Q15025 636 aa17.23■□□□□ 0.35
SHOX2-206ENST00000554685 MAGEB6P1A0A0J9YX57 407 aa17.22■□□□□ 0.35
SHOX2-206ENST00000554685 M0R2C6 588 aa17.22■□□□□ 0.35
SHOX2-206ENST00000554685 GPAA1O43292 621 aa17.22■□□□□ 0.35
SHOX2-206ENST00000554685 BAG3O95817 575 aa17.22■□□□□ 0.35
SHOX2-206ENST00000554685 ZNF589Q86UQ0 364 aaPredicted RBP17.22■□□□□ 0.35
SHOX2-206ENST00000554685 SEC62Q99442 399 aaKnown RBP17.22■□□□□ 0.35
SHOX2-206ENST00000554685 DSCC1Q9BVC3 393 aa17.22■□□□□ 0.35
SHOX2-206ENST00000554685 USP26Q9BXU7 913 aa17.22■□□□□ 0.35
SHOX2-206ENST00000554685 C22orf23Q9BZE7 217 aa17.22■□□□□ 0.35
SHOX2-206ENST00000554685 PUS7LQ9H0K6 701 aaKnown RBP17.22■□□□□ 0.35
SHOX2-206ENST00000554685 RPAP1Q9BWH6 1393 aaPredicted RBP17.21■□□□□ 0.35
SHOX2-206ENST00000554685 GRIN3BO60391 1043 aa17.21■□□□□ 0.35
SHOX2-206ENST00000554685 CHGBP05060 677 aa17.21■□□□□ 0.35
SHOX2-206ENST00000554685 VIL1P09327 827 aaKnown RBP17.21■□□□□ 0.35
SHOX2-206ENST00000554685 MMP14P50281 582 aa17.21■□□□□ 0.35
SHOX2-206ENST00000554685 EIF6P56537 245 aaKnown RBP17.21■□□□□ 0.35
SHOX2-206ENST00000554685 HDLBPQ00341 1268 aaKnown RBP17.21■□□□□ 0.35
SHOX2-206ENST00000554685 CIAPIN1Q6FI81 312 aa17.21■□□□□ 0.35
SHOX2-206ENST00000554685 RSBN1LQ6PCB5 846 aaPredicted RBP17.21■□□□□ 0.35
SHOX2-206ENST00000554685 FAM163AQ96GL9 167 aaPredicted RBP17.21■□□□□ 0.35
SHOX2-206ENST00000554685 MRIQ9BWK5 157 aa17.21■□□□□ 0.35
SHOX2-206ENST00000554685 LSG1Q9H089 658 aaKnown RBP17.21■□□□□ 0.35
SHOX2-206ENST00000554685 IL25Q9H293 177 aa17.21■□□□□ 0.35
SHOX2-206ENST00000554685 MROH7-TTC4A0A0A0MT08 1334 aa17.21■□□□□ 0.34
SHOX2-206ENST00000554685 MBD4O95243 580 aa17.2■□□□□ 0.34
SHOX2-206ENST00000554685 PLCG2P16885 1265 aa17.2■□□□□ 0.34
SHOX2-206ENST00000554685 GPR162Q16538 588 aa17.2■□□□□ 0.34
SHOX2-206ENST00000554685 SLFNL1Q499Z3 407 aa17.2■□□□□ 0.34
SHOX2-206ENST00000554685 CCDC129Q6ZRS4 1044 aa17.2■□□□□ 0.34
SHOX2-206ENST00000554685 CERS5Q8N5B7 392 aa17.2■□□□□ 0.34
SHOX2-206ENST00000554685 TBC1D32Q96NH3 1257 aa17.2■□□□□ 0.34
SHOX2-206ENST00000554685 TTF2Q9UNY4 1162 aaKnown RBP17.2■□□□□ 0.34
SHOX2-206ENST00000554685 CCDC88AQ3V6T2 1871 aa17.2■□□□□ 0.34
SHOX2-206ENST00000554685 COL4A5P29400 1685 aa17.2■□□□□ 0.34
SHOX2-206ENST00000554685 PSMD14O00487 310 aa17.19■□□□□ 0.34
SHOX2-206ENST00000554685 RAD17O75943 681 aa17.19■□□□□ 0.34
SHOX2-206ENST00000554685 YBX3P16989 372 aaKnown RBP eCLIP17.19■□□□□ 0.34
SHOX2-206ENST00000554685 RBM25P49756 843 aaKnown RBP17.19■□□□□ 0.34
SHOX2-206ENST00000554685 AGBL3Q8NEM8 1001 aa17.19■□□□□ 0.34
SHOX2-206ENST00000554685 ZNF384Q8TF68 577 aa17.19■□□□□ 0.34
SHOX2-206ENST00000554685 MAP4K1Q92918 833 aa17.19■□□□□ 0.34
SHOX2-206ENST00000554685 TEKT1Q969V4 418 aa17.19■□□□□ 0.34
SHOX2-206ENST00000554685 STRBPQ96SI9 672 aaKnown RBP17.19■□□□□ 0.34
SHOX2-206ENST00000554685 KCNQ5Q9NR82 932 aa17.19■□□□□ 0.34
SHOX2-206ENST00000554685 TSHZ2Q9NRE2 1034 aa17.19■□□□□ 0.34
SHOX2-206ENST00000554685 CTNNA3Q9UI47 895 aa17.19■□□□□ 0.34
SHOX2-206ENST00000554685 HDAC9Q9UKV0 1011 aa17.19■□□□□ 0.34
SHOX2-206ENST00000554685 CHD4Q14839 1912 aa17.19■□□□□ 0.34
SHOX2-206ENST00000554685 GAKO14976 1311 aa17.19■□□□□ 0.34
SHOX2-206ENST00000554685 FZD9O00144 591 aa17.18■□□□□ 0.34
SHOX2-206ENST00000554685 HSPD1P10809 573 aaKnown RBP17.18■□□□□ 0.34
SHOX2-206ENST00000554685 RPS12P25398 132 aaKnown RBP17.18■□□□□ 0.34
SHOX2-206ENST00000554685 PPP4CP60510 307 aa17.18■□□□□ 0.34
SHOX2-206ENST00000554685 CXCL9Q07325 125 aa17.18■□□□□ 0.34
SHOX2-206ENST00000554685 RNF20Q5VTR2 975 aa17.18■□□□□ 0.34
SHOX2-206ENST00000554685 HHIPL2Q6UWX4 724 aa17.18■□□□□ 0.34
SHOX2-206ENST00000554685 MIGA1Q8NAN2 632 aa17.18■□□□□ 0.34
SHOX2-206ENST00000554685 CRNKL1Q9BZJ0 848 aaKnown RBP17.18■□□□□ 0.34
SHOX2-206ENST00000554685 NACAP1Q9BZK3 213 aa17.18■□□□□ 0.34
SHOX2-206ENST00000554685 PSME4Q14997 1843 aa17.18■□□□□ 0.34
SHOX2-206ENST00000554685 MYO5AQ9Y4I1 1855 aaKnown RBP17.18■□□□□ 0.34
SHOX2-206ENST00000554685 GPR75-ASB3A0A0A6YYF3 556 aa17.17■□□□□ 0.34
SHOX2-206ENST00000554685 F8W031 263 aaPredicted RBP17.17■□□□□ 0.34
SHOX2-206ENST00000554685 PTH1RQ03431 593 aa17.17■□□□□ 0.34
SHOX2-206ENST00000554685 DIXDC1Q155Q3 683 aa17.17■□□□□ 0.34
SHOX2-206ENST00000554685 GRIK5Q16478 980 aa17.17■□□□□ 0.34
SHOX2-206ENST00000554685 ADGRA1Q86SQ6 560 aa17.17■□□□□ 0.34
SHOX2-206ENST00000554685 KIAA0825Q8IV33 1275 aa17.17■□□□□ 0.34
SHOX2-206ENST00000554685 OGFOD1Q8N543 542 aa17.17■□□□□ 0.34
SHOX2-206ENST00000554685 DDRGK1Q96HY6 314 aa17.17■□□□□ 0.34
SHOX2-206ENST00000554685 RIOK1Q9BRS2 568 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms