RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 PDE8BO95263 885 aa27.95■■■□□ 2.06
GABRB3-206ENST00000554556 HDLBPQ00341 1268 aaKnown RBP27.95■■■□□ 2.06
GABRB3-206ENST00000554556 LRRC24Q50LG9 513 aa27.95■■■□□ 2.06
GABRB3-206ENST00000554556 IGF2BP3O00425 579 aaKnown RBP eCLIP27.94■■■□□ 2.06
GABRB3-206ENST00000554556 CHAF1AQ13111 956 aaPredicted RBP27.94■■■□□ 2.06
GABRB3-206ENST00000554556 ANKRD44Q8N8A2 993 aa27.94■■■□□ 2.06
GABRB3-206ENST00000554556 IQSEC3Q9UPP2 1182 aaPredicted RBP27.94■■■□□ 2.06
GABRB3-206ENST00000554556 TCP10L2B9ZVM9 353 aa27.93■■■□□ 2.06
GABRB3-206ENST00000554556 ERO1AQ96HE7 468 aa27.92■■■□□ 2.06
GABRB3-206ENST00000554556 TRIM17Q9Y577 477 aa27.92■■■□□ 2.06
GABRB3-206ENST00000554556 PDE4DIPQ5VU43 2346 aa27.92■■■□□ 2.06
GABRB3-206ENST00000554556 TESPA1A2RU30 521 aaPredicted RBP27.91■■■□□ 2.06
GABRB3-206ENST00000554556 GJA5P36382 358 aa27.91■■■□□ 2.06
GABRB3-206ENST00000554556 VGLL2Q8N8G2 317 aa27.91■■■□□ 2.06
GABRB3-206ENST00000554556 SSH1Q8WYL5 1049 aa27.91■■■□□ 2.06
GABRB3-206ENST00000554556 TEKT1Q969V4 418 aa27.91■■■□□ 2.06
GABRB3-206ENST00000554556 OPTNQ96CV9 577 aa27.91■■■□□ 2.06
GABRB3-206ENST00000554556 TEPSINQ96N21 525 aa27.91■■■□□ 2.06
GABRB3-206ENST00000554556 USP44Q9H0E7 712 aa27.91■■■□□ 2.06
GABRB3-206ENST00000554556 ELP3Q9H9T3 547 aa27.91■■■□□ 2.06
GABRB3-206ENST00000554556 IFIT1P09914 478 aaKnown RBP27.9■■■□□ 2.06
GABRB3-206ENST00000554556 MRIQ9BWK5 157 aa27.9■■■□□ 2.06
GABRB3-206ENST00000554556 MAP3K9P80192 1104 aa27.89■■■□□ 2.06
GABRB3-206ENST00000554556 TMEM39BQ9GZU3 492 aa27.89■■■□□ 2.06
GABRB3-206ENST00000554556 TMOD2Q9NZR1 351 aa27.89■■■□□ 2.06
GABRB3-206ENST00000554556 SUGT1Q9Y2Z0 365 aa27.89■■■□□ 2.06
GABRB3-206ENST00000554556 MAST3O60307 1309 aa27.89■■■□□ 2.05
GABRB3-206ENST00000554556 BCAMP50895 628 aa27.88■■■□□ 2.05
GABRB3-206ENST00000554556 CRHR2Q13324 411 aa27.88■■■□□ 2.05
GABRB3-206ENST00000554556 PUM3Q15397 648 aaKnown RBP27.88■■■□□ 2.05
GABRB3-206ENST00000554556 GRIK5Q16478 980 aa27.88■■■□□ 2.05
GABRB3-206ENST00000554556 OTOP1Q7RTM1 612 aa27.88■■■□□ 2.05
GABRB3-206ENST00000554556 KLHDC4Q8TBB5 520 aa27.88■■■□□ 2.05
GABRB3-206ENST00000554556 CSADQ9Y600 493 aa27.88■■■□□ 2.05
GABRB3-206ENST00000554556 KIF16BQ96L93 1317 aa27.88■■■□□ 2.05
GABRB3-206ENST00000554556 OTOFQ9HC10 1997 aa27.88■■■□□ 2.05
GABRB3-206ENST00000554556 SLFN5Q08AF3 891 aa27.87■■■□□ 2.05
GABRB3-206ENST00000554556 ALDH1L2Q3SY69 923 aa27.87■■■□□ 2.05
GABRB3-206ENST00000554556 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.87■■■□□ 2.05
GABRB3-206ENST00000554556 INTS3Q68E01 1043 aaKnown RBP27.86■■■□□ 2.05
GABRB3-206ENST00000554556 HOOK2Q96ED9 719 aa27.86■■■□□ 2.05
GABRB3-206ENST00000554556 ZDHHC15Q96MV8 337 aa27.86■■■□□ 2.05
GABRB3-206ENST00000554556 PTPN18Q99952 460 aa27.86■■■□□ 2.05
GABRB3-206ENST00000554556 FGFR2P21802 821 aa27.85■■■□□ 2.05
GABRB3-206ENST00000554556 GTF2A2P52657 109 aa27.85■■■□□ 2.05
GABRB3-206ENST00000554556 SP3Q02447 781 aa27.85■■■□□ 2.05
GABRB3-206ENST00000554556 CDAN1Q8IWY9 1227 aa27.85■■■□□ 2.05
GABRB3-206ENST00000554556 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.85■■■□□ 2.05
GABRB3-206ENST00000554556 MS4A4AQ96JQ5 239 aa27.85■■■□□ 2.05
GABRB3-206ENST00000554556 EYA2O00167 538 aa27.84■■■□□ 2.05
GABRB3-206ENST00000554556 TNRC18O15417 2968 aaPredicted RBP27.84■■■□□ 2.05
GABRB3-206ENST00000554556 SLC5A1P13866 664 aa27.84■■■□□ 2.05
GABRB3-206ENST00000554556 VGLL4Q14135 290 aa27.84■■■□□ 2.05
GABRB3-206ENST00000554556 PRPF38BQ5VTL8 546 aaKnown RBP27.84■■■□□ 2.05
GABRB3-206ENST00000554556 FKBP1CQ5VVH2 108 aa27.84■■■□□ 2.05
GABRB3-206ENST00000554556 FAM83AQ86UY5 434 aa27.84■■■□□ 2.05
GABRB3-206ENST00000554556 CD99L2Q8TCZ2 262 aa27.84■■■□□ 2.05
GABRB3-206ENST00000554556 WDR66Q8TBY9 1149 aa27.83■■■□□ 2.05
GABRB3-206ENST00000554556 EFCC1Q9HA90 598 aa27.83■■■□□ 2.05
GABRB3-206ENST00000554556 ARHGEF6Q15052 776 aa27.82■■■□□ 2.04
GABRB3-206ENST00000554556 HHIPL2Q6UWX4 724 aa27.82■■■□□ 2.04
GABRB3-206ENST00000554556 LPIN2Q92539 896 aa27.82■■■□□ 2.04
GABRB3-206ENST00000554556 ZFYVE28Q9HCC9 887 aa27.82■■■□□ 2.04
GABRB3-206ENST00000554556 SMC4Q9NTJ3 1288 aa27.82■■■□□ 2.04
GABRB3-206ENST00000554556 PTPN22Q9Y2R2 807 aa27.82■■■□□ 2.04
GABRB3-206ENST00000554556 MYH13Q9UKX3 1938 aa27.82■■■□□ 2.04
GABRB3-206ENST00000554556 CCL15-CCL14A0A0B4J2E2 113 aa27.81■■■□□ 2.04
GABRB3-206ENST00000554556 WDHD1O75717 1129 aaPredicted RBP27.81■■■□□ 2.04
GABRB3-206ENST00000554556 CACNB3P54284 484 aa27.81■■■□□ 2.04
GABRB3-206ENST00000554556 CCL15Q16663 113 aa27.81■■■□□ 2.04
GABRB3-206ENST00000554556 OTUD5Q96G74 571 aa27.81■■■□□ 2.04
GABRB3-206ENST00000554556 RFX5P48382 616 aaPredicted RBP27.8■■■□□ 2.04
GABRB3-206ENST00000554556 TAF1CQ15572 869 aaPredicted RBP27.8■■■□□ 2.04
GABRB3-206ENST00000554556 APOBEC3HQ6NTF7 200 aaKnown RBP27.8■■■□□ 2.04
GABRB3-206ENST00000554556 CNKSR2Q8WXI2 1034 aa27.8■■■□□ 2.04
GABRB3-206ENST00000554556 BRI3BPQ8WY22 251 aa27.8■■■□□ 2.04
GABRB3-206ENST00000554556 FBXO3Q9UK99 471 aa27.8■■■□□ 2.04
GABRB3-206ENST00000554556 HDAC5Q9UQL6 1122 aa27.8■■■□□ 2.04
GABRB3-206ENST00000554556 DCAF15Q66K64 600 aa27.79■■■□□ 2.04
GABRB3-206ENST00000554556 SPDYE5A6NIY4 337 aa27.78■■■□□ 2.04
GABRB3-206ENST00000554556 UBTFL1P0CB47 393 aaPredicted RBP27.78■■■□□ 2.04
GABRB3-206ENST00000554556 ERO1BQ86YB8 467 aa27.78■■■□□ 2.04
GABRB3-206ENST00000554556 WRNIP1Q96S55 665 aa27.78■■■□□ 2.04
GABRB3-206ENST00000554556 GNL3LQ9NVN8 582 aaKnown RBP27.77■■■□□ 2.04
GABRB3-206ENST00000554556 CEP126Q9P2H0 1117 aa27.77■■■□□ 2.04
GABRB3-206ENST00000554556 CT47B1P0C2W7 299 aaPredicted RBP27.76■■■□□ 2.03
GABRB3-206ENST00000554556 CETPP11597 493 aa27.76■■■□□ 2.03
GABRB3-206ENST00000554556 ATG9AQ7Z3C6 839 aa27.76■■■□□ 2.03
GABRB3-206ENST00000554556 CDCA7LQ96GN5 454 aa27.76■■■□□ 2.03
GABRB3-206ENST00000554556 RPAP1Q9BWH6 1393 aaPredicted RBP27.75■■■□□ 2.03
GABRB3-206ENST00000554556 CIAO1O76071 339 aa27.75■■■□□ 2.03
GABRB3-206ENST00000554556 ZNF341Q9BYN7 854 aa27.75■■■□□ 2.03
GABRB3-206ENST00000554556 ZCCHC17Q9NP64 241 aaKnown RBP27.75■■■□□ 2.03
GABRB3-206ENST00000554556 SNCAIPQ9Y6H5 919 aa27.75■■■□□ 2.03
GABRB3-206ENST00000554556 AK9Q5TCS8 1911 aa27.75■■■□□ 2.03
GABRB3-206ENST00000554556 ATP2B3Q16720 1220 aa27.74■■■□□ 2.03
GABRB3-206ENST00000554556 FAM43AQ8N2R8 423 aa27.74■■■□□ 2.03
GABRB3-206ENST00000554556 FAM151AQ8WW52 585 aa27.74■■■□□ 2.03
GABRB3-206ENST00000554556 SNAPC2Q13487 334 aa27.73■■■□□ 2.03
GABRB3-206ENST00000554556 TRMT2AQ8IZ69 625 aaKnown RBP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms