RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 ATP9BO43861 1147 aa8.48□□□□□ -1.05
ATXN3-226ENST00000554350 RAD21O60216 631 aa8.48□□□□□ -1.05
ATXN3-226ENST00000554350 HIRAP54198 1017 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-226ENST00000554350 SFSWAPQ12872 951 aaKnown RBP8.48□□□□□ -1.05
ATXN3-226ENST00000554350 FLIIQ13045 1269 aa8.48□□□□□ -1.05
ATXN3-226ENST00000554350 SLC30A3Q99726 388 aa8.48□□□□□ -1.05
ATXN3-226ENST00000554350 PRR12Q9ULL5 1215 aa8.48□□□□□ -1.05
ATXN3-226ENST00000554350 GPC6Q9Y625 555 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-226ENST00000554350 K7ELQ4 463 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-226ENST00000554350 SYT9Q86SS6 491 aa8.47□□□□□ -1.05
ATXN3-226ENST00000554350 MARCH10Q8NA82 808 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-226ENST00000554350 ZNF232Q9UNY5 417 aa8.47□□□□□ -1.05
ATXN3-226ENST00000554350 LRRC37A3O60309 1634 aa8.47□□□□□ -1.05
ATXN3-226ENST00000554350 ANKARQ7Z5J8 1434 aa8.46□□□□□ -1.05
ATXN3-226ENST00000554350 ELOA3CA0A087WX78 387 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-226ENST00000554350 ELOA3DA6NLF2 546 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-226ENST00000554350 M0R2N6 131 aa8.46□□□□□ -1.06
ATXN3-226ENST00000554350 PIK3R2O00459 728 aa8.46□□□□□ -1.06
ATXN3-226ENST00000554350 C21orf2O43822 256 aa8.46□□□□□ -1.06
ATXN3-226ENST00000554350 FURINP09958 794 aa8.46□□□□□ -1.06
ATXN3-226ENST00000554350 PSMA6P60900 246 aaKnown RBP8.46□□□□□ -1.06
ATXN3-226ENST00000554350 COL9A3Q14050 684 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-226ENST00000554350 ELOA3BQ3SY89 546 aa8.46□□□□□ -1.06
ATXN3-226ENST00000554350 TOM1L2Q6ZVM7 507 aa8.46□□□□□ -1.06
ATXN3-226ENST00000554350 SIX5Q8N196 739 aa8.46□□□□□ -1.06
ATXN3-226ENST00000554350 OGFOD1Q8N543 542 aa8.46□□□□□ -1.06
ATXN3-226ENST00000554350 ELOA3Q8NG57 546 aa8.46□□□□□ -1.06
ATXN3-226ENST00000554350 ACSBG1Q96GR2 724 aa8.46□□□□□ -1.06
ATXN3-226ENST00000554350 TFCP2L1Q9NZI6 479 aa8.46□□□□□ -1.06
ATXN3-226ENST00000554350 NOP53Q9NZM5 478 aaKnown RBP8.46□□□□□ -1.06
ATXN3-226ENST00000554350 POGKQ9P215 609 aa8.46□□□□□ -1.06
ATXN3-226ENST00000554350 ADGRF5Q8IZF2 1346 aa8.46□□□□□ -1.06
ATXN3-226ENST00000554350 PHRF1Q9P1Y6 1649 aaKnown RBP8.46□□□□□ -1.06
ATXN3-226ENST00000554350 KNDC1Q76NI1 1749 aa8.46□□□□□ -1.06
ATXN3-226ENST00000554350 CRB1P82279 1406 aa8.46□□□□□ -1.06
ATXN3-226ENST00000554350 YTHDC2Q9H6S0 1430 aaKnown RBP8.46□□□□□ -1.06
ATXN3-226ENST00000554350 PPLO60437 1756 aa8.45□□□□□ -1.06
ATXN3-226ENST00000554350 SIN3BO75182 1162 aa8.45□□□□□ -1.06
ATXN3-226ENST00000554350 ATP1A2P50993 1020 aa8.45□□□□□ -1.06
ATXN3-226ENST00000554350 C1orf53Q5VUE5 145 aa8.45□□□□□ -1.06
ATXN3-226ENST00000554350 LARGE2Q8N3Y3 721 aa8.45□□□□□ -1.06
ATXN3-226ENST00000554350 TSEN2Q8NCE0 465 aaKnown RBP8.45□□□□□ -1.06
ATXN3-226ENST00000554350 HSH2DQ96JZ2 352 aa8.45□□□□□ -1.06
ATXN3-226ENST00000554350 PRAM1Q96QH2 718 aa8.45□□□□□ -1.06
ATXN3-226ENST00000554350 HIRIP3Q9BW71 556 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-226ENST00000554350 NMRK2Q9NPI5 230 aa8.45□□□□□ -1.06
ATXN3-226ENST00000554350 MKRN1Q9UHC7 482 aaKnown RBP8.45□□□□□ -1.06
ATXN3-226ENST00000554350 STARD13Q9Y3M8 1113 aa8.45□□□□□ -1.06
ATXN3-226ENST00000554350 AKAP12Q02952 1782 aa8.45□□□□□ -1.06
ATXN3-226ENST00000554350 SFI1A8K8P3 1242 aa8.44□□□□□ -1.06
ATXN3-226ENST00000554350 ADARB2-AS1A8MUL3 147 aa8.44□□□□□ -1.06
ATXN3-226ENST00000554350 ITGB7P26010 798 aa8.44□□□□□ -1.06
ATXN3-226ENST00000554350 XP32Q5T750 250 aa8.44□□□□□ -1.06
ATXN3-226ENST00000554350 MSL1Q68DK7 614 aa8.44□□□□□ -1.06
ATXN3-226ENST00000554350 ZNF280CQ8ND82 737 aa8.44□□□□□ -1.06
ATXN3-226ENST00000554350 RHPN1Q8TCX5 695 aa8.44□□□□□ -1.06
ATXN3-226ENST00000554350 PLVAPQ9BX97 442 aa8.44□□□□□ -1.06
ATXN3-226ENST00000554350 HCN4Q9Y3Q4 1203 aa8.44□□□□□ -1.06
ATXN3-226ENST00000554350 PNPLA7Q6ZV29 1317 aa8.44□□□□□ -1.06
ATXN3-226ENST00000554350 ANKRD30BQ9BXX2 1392 aa8.44□□□□□ -1.06
ATXN3-226ENST00000554350 TULP4Q9NRJ4 1543 aa8.44□□□□□ -1.06
ATXN3-226ENST00000554350 ARHGEF28Q8N1W1 1705 aaKnown RBP8.43□□□□□ -1.06
ATXN3-226ENST00000554350 PALM3A6NDB9 673 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-226ENST00000554350 ITGAEP38570 1179 aa8.43□□□□□ -1.06
ATXN3-226ENST00000554350 TNFRSF25Q93038 417 aa8.43□□□□□ -1.06
ATXN3-226ENST00000554350 PHACTR1Q9C0D0 580 aa8.43□□□□□ -1.06
ATXN3-226ENST00000554350 COL5A2P05997 1499 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-226ENST00000554350 PAPPAQ13219 1627 aa8.43□□□□□ -1.06
ATXN3-226ENST00000554350 KCNQ4P56696 695 aa8.42□□□□□ -1.06
ATXN3-226ENST00000554350 MLLT1Q03111 559 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-226ENST00000554350 TYRO3Q06418 890 aa8.42□□□□□ -1.06
ATXN3-226ENST00000554350 FSTL1Q12841 308 aa8.42□□□□□ -1.06
ATXN3-226ENST00000554350 RGL3Q3MIN7 710 aa8.42□□□□□ -1.06
ATXN3-226ENST00000554350 CLUAP1Q96AJ1 413 aa8.42□□□□□ -1.06
ATXN3-226ENST00000554350 ZNF594Q96JF6 807 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-226ENST00000554350 BRD4O60885 1362 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-226ENST00000554350 EIF3AQ14152 1382 aaKnown RBP8.41□□□□□ -1.06
ATXN3-226ENST00000554350 EXOC5O00471 708 aa8.41□□□□□ -1.06
ATXN3-226ENST00000554350 SPEM2Q0P670 501 aa8.41□□□□□ -1.06
ATXN3-226ENST00000554350 RAB44Q7Z6P3 723 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-226ENST00000554350 ABTB2Q8N961 1025 aa8.41□□□□□ -1.06
ATXN3-226ENST00000554350 SUSD3Q96L08 255 aa8.41□□□□□ -1.06
ATXN3-226ENST00000554350 CD2APQ9Y5K6 639 aa8.41□□□□□ -1.06
ATXN3-226ENST00000554350 KAT6BQ8WYB5 2073 aa8.41□□□□□ -1.06
ATXN3-226ENST00000554350 LMO7Q8WWI1 1683 aa8.4□□□□□ -1.06
ATXN3-226ENST00000554350 BCL9O00512 1426 aa8.4□□□□□ -1.06
ATXN3-226ENST00000554350 IGSF1Q8N6C5 1336 aa8.4□□□□□ -1.06
ATXN3-226ENST00000554350 PRR36Q9H6K5 1346 aa8.4□□□□□ -1.06
ATXN3-226ENST00000554350 ALBP02768 609 aa8.4□□□□□ -1.06
ATXN3-226ENST00000554350 GLMNQ92990 594 aa8.4□□□□□ -1.06
ATXN3-226ENST00000554350 BRD7Q9NPI1 651 aa8.4□□□□□ -1.06
ATXN3-226ENST00000554350 MAFBQ9Y5Q3 323 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-226ENST00000554350 CPDO75976 1380 aa8.39□□□□□ -1.07
ATXN3-226ENST00000554350 ROCK1Q13464 1354 aa8.39□□□□□ -1.07
ATXN3-226ENST00000554350 USP19O94966 1318 aa8.39□□□□□ -1.07
ATXN3-226ENST00000554350 SPATA31C1P0DKV0 1188 aa8.39□□□□□ -1.07
ATXN3-226ENST00000554350 C8orf86Q6ZUL3 223 aa8.39□□□□□ -1.07
ATXN3-226ENST00000554350 STAG2Q8N3U4 1231 aa8.39□□□□□ -1.07
ATXN3-226ENST00000554350 C2orf49Q9BVC5 232 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-226ENST00000554350 NEUROD4Q9HD90 331 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms