RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 HDLBPQ00341 1268 aaKnown RBP23.48■■□□□ 1.35
CPSF2-203ENST00000554290 PUM3Q15397 648 aaKnown RBP23.48■■□□□ 1.35
CPSF2-203ENST00000554290 PKN2Q16513 984 aaKnown RBP23.48■■□□□ 1.35
CPSF2-203ENST00000554290 CLMNQ96JQ2 1002 aa23.48■■□□□ 1.35
CPSF2-203ENST00000554290 CFHR5Q9BXR6 569 aa23.48■■□□□ 1.35
CPSF2-203ENST00000554290 USP2O75604 605 aaPredicted RBP23.47■■□□□ 1.35
CPSF2-203ENST00000554290 BCAMP50895 628 aa23.47■■□□□ 1.35
CPSF2-203ENST00000554290 ANKRD13AQ8IZ07 590 aa23.47■■□□□ 1.35
CPSF2-203ENST00000554290 WNK4Q96J92 1243 aa23.47■■□□□ 1.35
CPSF2-203ENST00000554290 HDAC5Q9UQL6 1122 aa23.47■■□□□ 1.35
CPSF2-203ENST00000554290 KIF16BQ96L93 1317 aa23.47■■□□□ 1.35
CPSF2-203ENST00000554290 EYA2O00167 538 aa23.46■■□□□ 1.35
CPSF2-203ENST00000554290 UBTFL1P0CB47 393 aaPredicted RBP23.46■■□□□ 1.35
CPSF2-203ENST00000554290 TEKT1Q969V4 418 aa23.46■■□□□ 1.35
CPSF2-203ENST00000554290 TCP10L2B9ZVM9 353 aa23.45■■□□□ 1.34
CPSF2-203ENST00000554290 CCER2I3L3R5 266 aa23.45■■□□□ 1.34
CPSF2-203ENST00000554290 FGFR2P21802 821 aa23.45■■□□□ 1.34
CPSF2-203ENST00000554290 IFNL1Q8IU54 200 aa23.45■■□□□ 1.34
CPSF2-203ENST00000554290 MRIQ9BWK5 157 aa23.45■■□□□ 1.34
CPSF2-203ENST00000554290 API5Q9BZZ5 524 aaKnown RBP23.45■■□□□ 1.34
CPSF2-203ENST00000554290 NOB1Q9ULX3 412 aaKnown RBP23.45■■□□□ 1.34
CPSF2-203ENST00000554290 FKTNO75072 461 aa23.44■■□□□ 1.34
CPSF2-203ENST00000554290 SLC5A1P13866 664 aa23.44■■□□□ 1.34
CPSF2-203ENST00000554290 RFX5P48382 616 aaPredicted RBP23.44■■□□□ 1.34
CPSF2-203ENST00000554290 GRIK5Q16478 980 aa23.44■■□□□ 1.34
CPSF2-203ENST00000554290 LPIN2Q92539 896 aa23.44■■□□□ 1.34
CPSF2-203ENST00000554290 FBXO3Q9UK99 471 aa23.44■■□□□ 1.34
CPSF2-203ENST00000554290 SUGT1Q9Y2Z0 365 aa23.44■■□□□ 1.34
CPSF2-203ENST00000554290 MAST3O60307 1309 aa23.43■■□□□ 1.34
CPSF2-203ENST00000554290 OTUD7BQ6GQQ9 843 aa23.43■■□□□ 1.34
CPSF2-203ENST00000554290 TEPSINQ96N21 525 aa23.42■■□□□ 1.34
CPSF2-203ENST00000554290 TMOD2Q9NZR1 351 aa23.42■■□□□ 1.34
CPSF2-203ENST00000554290 ATG9AQ7Z3C6 839 aa23.41■■□□□ 1.34
CPSF2-203ENST00000554290 WDR66Q8TBY9 1149 aa23.41■■□□□ 1.34
CPSF2-203ENST00000554290 ZDHHC15Q96MV8 337 aa23.41■■□□□ 1.34
CPSF2-203ENST00000554290 TMEM39BQ9GZU3 492 aa23.41■■□□□ 1.34
CPSF2-203ENST00000554290 CEP126Q9P2H0 1117 aa23.41■■□□□ 1.34
CPSF2-203ENST00000554290 HPS5Q9UPZ3 1129 aa23.41■■□□□ 1.34
CPSF2-203ENST00000554290 ARAP2Q8WZ64 1704 aa23.41■■□□□ 1.34
CPSF2-203ENST00000554290 CIAO1O76071 339 aa23.4■■□□□ 1.34
CPSF2-203ENST00000554290 R3HDMLQ9H3Y0 253 aa23.4■■□□□ 1.34
CPSF2-203ENST00000554290 ELP3Q9H9T3 547 aa23.4■■□□□ 1.34
CPSF2-203ENST00000554290 SOX10P56693 466 aa23.39■■□□□ 1.33
CPSF2-203ENST00000554290 SIL1Q9H173 461 aa23.39■■□□□ 1.33
CPSF2-203ENST00000554290 IGF2BP3O00425 579 aaKnown RBP eCLIP23.38■■□□□ 1.33
CPSF2-203ENST00000554290 GJA5P36382 358 aa23.38■■□□□ 1.33
CPSF2-203ENST00000554290 MAP3K9P80192 1104 aa23.38■■□□□ 1.33
CPSF2-203ENST00000554290 ATP2B3Q16720 1220 aa23.38■■□□□ 1.33
CPSF2-203ENST00000554290 FKBP1CQ5VVH2 108 aa23.38■■□□□ 1.33
CPSF2-203ENST00000554290 FBXO46Q6PJ61 603 aaPredicted RBP23.38■■□□□ 1.33
CPSF2-203ENST00000554290 HHIPL2Q6UWX4 724 aa23.38■■□□□ 1.33
CPSF2-203ENST00000554290 CDAN1Q8IWY9 1227 aa23.38■■□□□ 1.33
CPSF2-203ENST00000554290 OPTNQ96CV9 577 aa23.38■■□□□ 1.33
CPSF2-203ENST00000554290 HOOK2Q96ED9 719 aa23.38■■□□□ 1.33
CPSF2-203ENST00000554290 GNL3LQ9NVN8 582 aaKnown RBP23.38■■□□□ 1.33
CPSF2-203ENST00000554290 RARSP54136 660 aaKnown RBP23.37■■□□□ 1.33
CPSF2-203ENST00000554290 CACNB3P54284 484 aa23.37■■□□□ 1.33
CPSF2-203ENST00000554290 APOBEC3HQ6NTF7 200 aaKnown RBP23.37■■□□□ 1.33
CPSF2-203ENST00000554290 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.37■■□□□ 1.33
CPSF2-203ENST00000554290 FAM83AQ86UY5 434 aa23.37■■□□□ 1.33
CPSF2-203ENST00000554290 CSADQ9Y600 493 aa23.37■■□□□ 1.33
CPSF2-203ENST00000554290 LRRFIP2Q9Y608 721 aaKnown RBP23.37■■□□□ 1.33
CPSF2-203ENST00000554290 TESPA1A2RU30 521 aaPredicted RBP23.36■■□□□ 1.33
CPSF2-203ENST00000554290 IL15P40933 162 aaPredicted RBP23.36■■□□□ 1.33
CPSF2-203ENST00000554290 ARHGAP45Q92619 1136 aa23.36■■□□□ 1.33
CPSF2-203ENST00000554290 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.35■■□□□ 1.33
CPSF2-203ENST00000554290 VGLL4Q14135 290 aa23.34■■□□□ 1.33
CPSF2-203ENST00000554290 GNAI3P08754 354 aa23.33■■□□□ 1.33
CPSF2-203ENST00000554290 GTF2A2P52657 109 aa23.33■■□□□ 1.33
CPSF2-203ENST00000554290 INTS3Q68E01 1043 aaKnown RBP23.33■■□□□ 1.33
CPSF2-203ENST00000554290 MS4A4AQ96JQ5 239 aa23.33■■□□□ 1.33
CPSF2-203ENST00000554290 MEIS3Q99687 375 aa23.33■■□□□ 1.33
CPSF2-203ENST00000554290 PTPN18Q99952 460 aa23.33■■□□□ 1.33
CPSF2-203ENST00000554290 COPRSQ9NQ92 184 aa23.33■■□□□ 1.33
CPSF2-203ENST00000554290 SEMA3EO15041 775 aa23.32■■□□□ 1.32
CPSF2-203ENST00000554290 IPO8O15397 1037 aaKnown RBP23.32■■□□□ 1.32
CPSF2-203ENST00000554290 CRHR2Q13324 411 aa23.32■■□□□ 1.32
CPSF2-203ENST00000554290 DCAF15Q66K64 600 aa23.32■■□□□ 1.32
CPSF2-203ENST00000554290 ERO1AQ96HE7 468 aa23.32■■□□□ 1.32
CPSF2-203ENST00000554290 DENND2AQ9ULE3 1009 aa23.32■■□□□ 1.32
CPSF2-203ENST00000554290 PA2G4Q9UQ80 394 aaKnown RBP23.32■■□□□ 1.32
CPSF2-203ENST00000554290 LDHBP07195 334 aaKnown RBP23.31■■□□□ 1.32
CPSF2-203ENST00000554290 OTUD5Q96G74 571 aa23.31■■□□□ 1.32
CPSF2-203ENST00000554290 TRIM17Q9Y577 477 aa23.31■■□□□ 1.32
CPSF2-203ENST00000554290 LAMB1P07942 1786 aa23.3■■□□□ 1.32
CPSF2-203ENST00000554290 CCL15-CCL14A0A0B4J2E2 113 aa23.3■■□□□ 1.32
CPSF2-203ENST00000554290 CCL15Q16663 113 aa23.3■■□□□ 1.32
CPSF2-203ENST00000554290 CNKSR2Q8WXI2 1034 aa23.3■■□□□ 1.32
CPSF2-203ENST00000554290 WRNIP1Q96S55 665 aa23.3■■□□□ 1.32
CPSF2-203ENST00000554290 DAGLAQ9Y4D2 1042 aa23.3■■□□□ 1.32
CPSF2-203ENST00000554290 RPAP1Q9BWH6 1393 aaPredicted RBP23.29■■□□□ 1.32
CPSF2-203ENST00000554290 SPDYE5A6NIY4 337 aa23.29■■□□□ 1.32
CPSF2-203ENST00000554290 PRDX5P30044 214 aa23.29■■□□□ 1.32
CPSF2-203ENST00000554290 PHKA1P46020 1223 aa23.29■■□□□ 1.32
CPSF2-203ENST00000554290 OTOP1Q7RTM1 612 aa23.29■■□□□ 1.32
CPSF2-203ENST00000554290 ERO1BQ86YB8 467 aa23.29■■□□□ 1.32
CPSF2-203ENST00000554290 FAM151AQ8WW52 585 aa23.29■■□□□ 1.32
CPSF2-203ENST00000554290 BRI3BPQ8WY22 251 aa23.29■■□□□ 1.32
CPSF2-203ENST00000554290 SALL1Q9NSC2 1324 aa23.29■■□□□ 1.32
CPSF2-203ENST00000554290 SRGAP3O43295 1099 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms