RNA–Protein interactions for RNA: ENST00000554233.1

IFT43-207, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 635 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-207ENST00000554233 PLVAPQ9BX97 442 aa6.58□□□□□ -1.36
IFT43-207ENST00000554233 PLCH1Q4KWH8 1693 aa6.58□□□□□ -1.36
IFT43-207ENST00000554233 PHRF1Q9P1Y6 1649 aaKnown RBP6.58□□□□□ -1.36
IFT43-207ENST00000554233 POLR3AO14802 1390 aaPredicted RBP6.57□□□□□ -1.36
IFT43-207ENST00000554233 NRKQ7Z2Y5 1582 aa6.57□□□□□ -1.36
IFT43-207ENST00000554233 PRR36Q9H6K5 1346 aa6.57□□□□□ -1.36
IFT43-207ENST00000554233 NRAPQ86VF7 1730 aa6.57□□□□□ -1.36
IFT43-207ENST00000554233 ADARB2-AS1A8MUL3 147 aa6.57□□□□□ -1.36
IFT43-207ENST00000554233 C1QTNF9BB2RNN3 333 aa6.57□□□□□ -1.36
IFT43-207ENST00000554233 PDIA4P13667 645 aaKnown RBP6.57□□□□□ -1.36
IFT43-207ENST00000554233 TBC1D8BQ0IIM8 1120 aa6.57□□□□□ -1.36
IFT43-207ENST00000554233 HIF1AQ16665 826 aa6.57□□□□□ -1.36
IFT43-207ENST00000554233 RTN1Q16799 776 aa6.57□□□□□ -1.36
IFT43-207ENST00000554233 TNFRSF25Q93038 417 aa6.57□□□□□ -1.36
IFT43-207ENST00000554233 IGFLR1Q9H665 355 aa6.57□□□□□ -1.36
IFT43-207ENST00000554233 TRAK1Q9UPV9 953 aa6.57□□□□□ -1.36
IFT43-207ENST00000554233 CDK12Q9NYV4 1490 aaPredicted RBP6.57□□□□□ -1.36
IFT43-207ENST00000554233 BRD4O60885 1362 aaPredicted RBP6.57□□□□□ -1.36
IFT43-207ENST00000554233 SPATA31A3Q5VYP0 1347 aa6.56□□□□□ -1.36
IFT43-207ENST00000554233 LOC100996750A0A140TA64 210 aa6.56□□□□□ -1.36
IFT43-207ENST00000554233 M0R082 166 aa6.56□□□□□ -1.36
IFT43-207ENST00000554233 ALBP02768 609 aa6.56□□□□□ -1.36
IFT43-207ENST00000554233 ADH7P40394 386 aa6.56□□□□□ -1.36
IFT43-207ENST00000554233 CHRNA4P43681 627 aa6.56□□□□□ -1.36
IFT43-207ENST00000554233 BAG6P46379 1132 aa6.56□□□□□ -1.36
IFT43-207ENST00000554233 NBPF8Q3BBV2 869 aa6.56□□□□□ -1.36
IFT43-207ENST00000554233 C8orf86Q6ZUL3 223 aa6.56□□□□□ -1.36
IFT43-207ENST00000554233 ILDR2Q71H61 639 aa6.56□□□□□ -1.36
IFT43-207ENST00000554233 CD163Q86VB7 1156 aa6.56□□□□□ -1.36
IFT43-207ENST00000554233 ZNF417Q8TAU3 575 aa6.56□□□□□ -1.36
IFT43-207ENST00000554233 ZNF587Q96SQ5 575 aaPredicted RBP6.56□□□□□ -1.36
IFT43-207ENST00000554233 KRTAP4-6Q9BYQ5 205 aa6.56□□□□□ -1.36
IFT43-207ENST00000554233 BCS1LQ9Y276 419 aa6.56□□□□□ -1.36
IFT43-207ENST00000554233 STARD13Q9Y3M8 1113 aa6.56□□□□□ -1.36
IFT43-207ENST00000554233 TNS3Q68CZ2 1445 aa6.56□□□□□ -1.36
IFT43-207ENST00000554233 BRWD3Q6RI45 1802 aa6.55□□□□□ -1.36
IFT43-207ENST00000554233 COL14A1Q05707 1796 aaKnown RBP6.55□□□□□ -1.36
IFT43-207ENST00000554233 FAM200AQ8TCP9 573 aa6.55□□□□□ -1.36
IFT43-207ENST00000554233 PUS7Q96PZ0 661 aaKnown RBP6.55□□□□□ -1.36
IFT43-207ENST00000554233 C1orf115Q9H7X2 142 aa6.55□□□□□ -1.36
IFT43-207ENST00000554233 KLK14Q9P0G3 267 aa6.55□□□□□ -1.36
IFT43-207ENST00000554233 POGKQ9P215 609 aa6.55□□□□□ -1.36
IFT43-207ENST00000554233 PIK3C2AO00443 1686 aa6.55□□□□□ -1.36
IFT43-207ENST00000554233 COL18A1P39060 1754 aa6.54□□□□□ -1.36
IFT43-207ENST00000554233 CENPJQ9HC77 1338 aaPredicted RBP6.54□□□□□ -1.36
IFT43-207ENST00000554233 SSH2Q76I76 1423 aa6.54□□□□□ -1.36
IFT43-207ENST00000554233 TGFBR3LH3BV60 316 aa6.54□□□□□ -1.36
IFT43-207ENST00000554233 FOXO3O43524 673 aa6.54□□□□□ -1.36
IFT43-207ENST00000554233 ADAM23O75077 832 aa6.54□□□□□ -1.36
IFT43-207ENST00000554233 MICALL1Q8N3F8 863 aa6.54□□□□□ -1.36
IFT43-207ENST00000554233 DDX17Q92841 729 aaKnown RBP6.54□□□□□ -1.36
IFT43-207ENST00000554233 VTI1AQ96AJ9 217 aa6.54□□□□□ -1.36
IFT43-207ENST00000554233 UBE2OQ9C0C9 1292 aaKnown RBP6.54□□□□□ -1.36
IFT43-207ENST00000554233 LMO7Q8WWI1 1683 aa6.54□□□□□ -1.36
IFT43-207ENST00000554233 SLIT2O94813 1529 aa6.54□□□□□ -1.36
IFT43-207ENST00000554233 ARHGEF10O15013 1369 aa6.54□□□□□ -1.36
IFT43-207ENST00000554233 ROCK2O75116 1388 aaKnown RBP6.54□□□□□ -1.36
IFT43-207ENST00000554233 RGPD5Q99666 1765 aa6.54□□□□□ -1.36
IFT43-207ENST00000554233 FURINP09958 794 aa6.53□□□□□ -1.36
IFT43-207ENST00000554233 WEE1P30291 646 aa6.53□□□□□ -1.36
IFT43-207ENST00000554233 DGKZQ13574 1117 aa6.53□□□□□ -1.36
IFT43-207ENST00000554233 IER5Q5VY09 327 aa6.53□□□□□ -1.36
IFT43-207ENST00000554233 NUDT16Q96DE0 195 aaKnown RBP6.53□□□□□ -1.36
IFT43-207ENST00000554233 PNMA5Q96PV4 448 aa6.53□□□□□ -1.36
IFT43-207ENST00000554233 GSX2Q9BZM3 304 aa6.53□□□□□ -1.36
IFT43-207ENST00000554233 DMGDHQ9UI17 866 aaKnown RBP6.53□□□□□ -1.36
IFT43-207ENST00000554233 NOVA2Q9UNW9 492 aaKnown RBP6.53□□□□□ -1.36
IFT43-207ENST00000554233 TONSLQ96HA7 1378 aa6.53□□□□□ -1.36
IFT43-207ENST00000554233 BCL9LQ86UU0 1499 aa6.53□□□□□ -1.36
IFT43-207ENST00000554233 WNK3Q9BYP7 1800 aa6.53□□□□□ -1.36
IFT43-207ENST00000554233 MYOM1P52179 1685 aa6.52□□□□□ -1.37
IFT43-207ENST00000554233 CPSF1Q10570 1443 aaKnown RBP6.52□□□□□ -1.37
IFT43-207ENST00000554233 FAM229AH3BQW9 127 aa6.52□□□□□ -1.37
IFT43-207ENST00000554233 SPATA31C1P0DKV0 1188 aa6.52□□□□□ -1.37
IFT43-207ENST00000554233 IDH3AP50213 366 aa6.52□□□□□ -1.37
IFT43-207ENST00000554233 COL9A3Q14050 684 aaPredicted RBP6.52□□□□□ -1.37
IFT43-207ENST00000554233 KRT28Q7Z3Y7 464 aa6.52□□□□□ -1.37
IFT43-207ENST00000554233 CDK19Q9BWU1 502 aa6.52□□□□□ -1.37
IFT43-207ENST00000554233 QTRT2Q9H974 415 aaKnown RBP6.52□□□□□ -1.37
IFT43-207ENST00000554233 LTN1O94822 1766 aa6.52□□□□□ -1.37
IFT43-207ENST00000554233 ATRNO75882 1429 aa6.51□□□□□ -1.37
IFT43-207ENST00000554233 SLIT3O75094 1523 aa6.51□□□□□ -1.37
IFT43-207ENST00000554233 ABCC6O95255 1503 aa6.51□□□□□ -1.37
IFT43-207ENST00000554233 SPDYE3A6NKU9 549 aa6.51□□□□□ -1.37
IFT43-207ENST00000554233 K7ELQ4 463 aaPredicted RBP6.51□□□□□ -1.37
IFT43-207ENST00000554233 NFKB1P19838 968 aa6.51□□□□□ -1.37
IFT43-207ENST00000554233 CCINQ13939 588 aa6.51□□□□□ -1.37
IFT43-207ENST00000554233 SAFB2Q14151 953 aaKnown RBP eCLIP6.51□□□□□ -1.37
IFT43-207ENST00000554233 PRRT3Q5FWE3 981 aa6.51□□□□□ -1.37
IFT43-207ENST00000554233 ZNF772Q68DY9 489 aaPredicted RBP6.51□□□□□ -1.37
IFT43-207ENST00000554233 KRT25Q7Z3Z0 450 aa6.51□□□□□ -1.37
IFT43-207ENST00000554233 PRIMPOLQ96LW4 560 aa6.51□□□□□ -1.37
IFT43-207ENST00000554233 HIRIP3Q9BW71 556 aaPredicted RBP6.51□□□□□ -1.37
IFT43-207ENST00000554233 SLC6A14Q9UN76 642 aa6.51□□□□□ -1.37
IFT43-207ENST00000554233 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.51□□□□□ -1.37
IFT43-207ENST00000554233 CD163L1Q9NR16 1453 aa6.51□□□□□ -1.37
IFT43-207ENST00000554233 GLI3P10071 1580 aa6.51□□□□□ -1.37
IFT43-207ENST00000554233 USP19O94966 1318 aa6.5□□□□□ -1.37
IFT43-207ENST00000554233 EVC2Q86UK5 1308 aa6.5□□□□□ -1.37
IFT43-207ENST00000554233 USP6P35125 1406 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms