RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 TLR2O60603 784 aa17.66■□□□□ 0.42
NEDD1-206ENST00000554226 MYCP01106 439 aaPredicted RBP17.66■□□□□ 0.42
NEDD1-206ENST00000554226 MAP3K9P80192 1104 aa17.66■□□□□ 0.42
NEDD1-206ENST00000554226 DDX10Q13206 875 aaKnown RBP17.66■□□□□ 0.42
NEDD1-206ENST00000554226 HELBQ8NG08 1087 aaPredicted RBP17.66■□□□□ 0.42
NEDD1-206ENST00000554226 TDRD7Q8NHU6 1098 aaKnown RBP17.66■□□□□ 0.42
NEDD1-206ENST00000554226 CNKSR2Q8WXI2 1034 aa17.66■□□□□ 0.42
NEDD1-206ENST00000554226 TSR2Q969E8 191 aaKnown RBP17.66■□□□□ 0.42
NEDD1-206ENST00000554226 SHISA4Q96DD7 197 aa17.66■□□□□ 0.42
NEDD1-206ENST00000554226 PRKRIP1Q9H875 184 aaPredicted RBP17.66■□□□□ 0.42
NEDD1-206ENST00000554226 RBM5P52756 815 aaKnown RBP eCLIP17.65■□□□□ 0.42
NEDD1-206ENST00000554226 LACTBP83111 547 aaPredicted RBP17.65■□□□□ 0.42
NEDD1-206ENST00000554226 MFSD14BQ5SR56 506 aa17.65■□□□□ 0.42
NEDD1-206ENST00000554226 CDAN1Q8IWY9 1227 aa17.65■□□□□ 0.42
NEDD1-206ENST00000554226 DZIP1LQ8IYY4 767 aaKnown RBP17.65■□□□□ 0.42
NEDD1-206ENST00000554226 TTF2Q9UNY4 1162 aaKnown RBP17.65■□□□□ 0.42
NEDD1-206ENST00000554226 DLL1O00548 723 aa17.64■□□□□ 0.41
NEDD1-206ENST00000554226 WDHD1O75717 1129 aaPredicted RBP17.64■□□□□ 0.41
NEDD1-206ENST00000554226 TNNI2P48788 182 aa17.64■□□□□ 0.41
NEDD1-206ENST00000554226 FKBP5Q13451 457 aaPredicted RBP17.64■□□□□ 0.41
NEDD1-206ENST00000554226 ARHGAP39Q9C0H5 1083 aa17.64■□□□□ 0.41
NEDD1-206ENST00000554226 PRO3102Q9H379 93 aa17.64■□□□□ 0.41
NEDD1-206ENST00000554226 TDRD3Q9H7E2 651 aaKnown RBP17.64■□□□□ 0.41
NEDD1-206ENST00000554226 CSADQ9Y600 493 aa17.64■□□□□ 0.41
NEDD1-206ENST00000554226 IL16Q14005 1332 aa17.64■□□□□ 0.41
NEDD1-206ENST00000554226 CETPP11597 493 aa17.63■□□□□ 0.41
NEDD1-206ENST00000554226 HDLBPQ00341 1268 aaKnown RBP17.63■□□□□ 0.41
NEDD1-206ENST00000554226 UBE4AQ14139 1066 aa17.63■□□□□ 0.41
NEDD1-206ENST00000554226 NCBP3Q53F19 620 aaKnown RBP17.63■□□□□ 0.41
NEDD1-206ENST00000554226 TMEM39BQ9GZU3 492 aa17.63■□□□□ 0.41
NEDD1-206ENST00000554226 JAG2Q9Y219 1238 aa17.63■□□□□ 0.41
NEDD1-206ENST00000554226 KIF22Q14807 665 aa17.62■□□□□ 0.41
NEDD1-206ENST00000554226 LDHAL6AQ6ZMR3 332 aa17.62■□□□□ 0.41
NEDD1-206ENST00000554226 UBE2Q1Q7Z7E8 422 aa17.62■□□□□ 0.41
NEDD1-206ENST00000554226 ERO1BQ86YB8 467 aa17.62■□□□□ 0.41
NEDD1-206ENST00000554226 SLC17A8Q8NDX2 589 aa17.62■□□□□ 0.41
NEDD1-206ENST00000554226 SNCAIPQ9Y6H5 919 aa17.62■□□□□ 0.41
NEDD1-206ENST00000554226 CRKP46108 304 aa17.61■□□□□ 0.41
NEDD1-206ENST00000554226 MTFR1Q15390 333 aa17.61■□□□□ 0.41
NEDD1-206ENST00000554226 FKBP1CQ5VVH2 108 aa17.61■□□□□ 0.41
NEDD1-206ENST00000554226 WWC1Q8IX03 1113 aa17.61■□□□□ 0.41
NEDD1-206ENST00000554226 DPF3Q92784 378 aa17.61■□□□□ 0.41
NEDD1-206ENST00000554226 FAM84BQ96KN1 310 aaPredicted RBP17.61■□□□□ 0.41
NEDD1-206ENST00000554226 RPAP1Q9BWH6 1393 aaPredicted RBP17.61■□□□□ 0.41
NEDD1-206ENST00000554226 BTBD19C9JJ37 291 aa17.6■□□□□ 0.41
NEDD1-206ENST00000554226 HIBADHP31937 336 aaKnown RBP17.6■□□□□ 0.41
NEDD1-206ENST00000554226 PPIL2Q13356 520 aa17.6■□□□□ 0.41
NEDD1-206ENST00000554226 SNAPC2Q13487 334 aa17.6■□□□□ 0.41
NEDD1-206ENST00000554226 CCDC57Q2TAC2 916 aa17.6■□□□□ 0.41
NEDD1-206ENST00000554226 BEND3Q5T5X7 828 aa17.6■□□□□ 0.41
NEDD1-206ENST00000554226 LMBR1LQ6UX01 489 aa17.6■□□□□ 0.41
NEDD1-206ENST00000554226 C17orf99Q6UX52 265 aa17.6■□□□□ 0.41
NEDD1-206ENST00000554226 FAM83AQ86UY5 434 aa17.6■□□□□ 0.41
NEDD1-206ENST00000554226 HOOK2Q96ED9 719 aa17.6■□□□□ 0.41
NEDD1-206ENST00000554226 MRIQ9BWK5 157 aa17.6■□□□□ 0.41
NEDD1-206ENST00000554226 TCP10L2B9ZVM9 353 aa17.59■□□□□ 0.41
NEDD1-206ENST00000554226 IRF6O14896 467 aa17.59■□□□□ 0.41
NEDD1-206ENST00000554226 EPHA10Q5JZY3 1008 aa17.59■□□□□ 0.41
NEDD1-206ENST00000554226 NKX2-3Q8TAU0 364 aa17.59■□□□□ 0.41
NEDD1-206ENST00000554226 CNNM1Q9NRU3 951 aa17.59■□□□□ 0.41
NEDD1-206ENST00000554226 CUL9Q8IWT3 2517 aa17.58■□□□□ 0.41
NEDD1-206ENST00000554226 ADGRA2Q96PE1 1338 aa17.58■□□□□ 0.4
NEDD1-206ENST00000554226 GYG1P46976 350 aa17.58■□□□□ 0.4
NEDD1-206ENST00000554226 ZNF594Q96JF6 807 aaPredicted RBP17.58■□□□□ 0.4
NEDD1-206ENST00000554226 HTATIP2Q9BUP3 242 aa17.58■□□□□ 0.4
NEDD1-206ENST00000554226 SRRDQ9UH36 339 aa17.58■□□□□ 0.4
NEDD1-206ENST00000554226 MGAMO43451 1857 aa17.57■□□□□ 0.4
NEDD1-206ENST00000554226 GRM8O00222 908 aa17.57■□□□□ 0.4
NEDD1-206ENST00000554226 CTGFP29279 349 aa17.57■□□□□ 0.4
NEDD1-206ENST00000554226 GJA8P48165 433 aa17.57■□□□□ 0.4
NEDD1-206ENST00000554226 PPATQ06203 517 aa17.57■□□□□ 0.4
NEDD1-206ENST00000554226 TBC1D22AQ8WUA7 517 aa17.57■□□□□ 0.4
NEDD1-206ENST00000554226 ZDHHC15Q96MV8 337 aa17.57■□□□□ 0.4
NEDD1-206ENST00000554226 WRNIP1Q96S55 665 aa17.57■□□□□ 0.4
NEDD1-206ENST00000554226 CHMP3Q9Y3E7 222 aa17.57■□□□□ 0.4
NEDD1-206ENST00000554226 COL6A3P12111 3177 aa17.56■□□□□ 0.4
NEDD1-206ENST00000554226 LAMA3Q16787 3333 aa17.56■□□□□ 0.4
NEDD1-206ENST00000554226 A0A1W2PPC1 479 aa17.56■□□□□ 0.4
NEDD1-206ENST00000554226 VAMP4O75379 141 aa17.56■□□□□ 0.4
NEDD1-206ENST00000554226 GJB1P08034 283 aa17.56■□□□□ 0.4
NEDD1-206ENST00000554226 TAF7LQ5H9L4 462 aa17.56■□□□□ 0.4
NEDD1-206ENST00000554226 FBXO33Q7Z6M2 555 aa17.56■□□□□ 0.4
NEDD1-206ENST00000554226 ANKRD23Q86SG2 305 aa17.56■□□□□ 0.4
NEDD1-206ENST00000554226 TEKT1Q969V4 418 aa17.56■□□□□ 0.4
NEDD1-206ENST00000554226 TRIM47Q96LD4 638 aa17.56■□□□□ 0.4
NEDD1-206ENST00000554226 FANCIQ9NVI1 1328 aa17.55■□□□□ 0.4
NEDD1-206ENST00000554226 PLIN1O60240 522 aa17.55■□□□□ 0.4
NEDD1-206ENST00000554226 GRK4P32298 578 aa17.55■□□□□ 0.4
NEDD1-206ENST00000554226 GRIK5Q16478 980 aa17.55■□□□□ 0.4
NEDD1-206ENST00000554226 ZKSCAN4Q969J2 545 aaPredicted RBP17.55■□□□□ 0.4
NEDD1-206ENST00000554226 KCNH4Q9UQ05 1017 aa17.55■□□□□ 0.4
NEDD1-206ENST00000554226 SUGT1Q9Y2Z0 365 aa17.55■□□□□ 0.4
NEDD1-206ENST00000554226 RIPOR2Q9Y4F9 1068 aa17.55■□□□□ 0.4
NEDD1-206ENST00000554226 MROH5Q6ZUA9 1318 aa17.54■□□□□ 0.4
NEDD1-206ENST00000554226 ZBTB7BO15156 539 aaPredicted RBP17.54■□□□□ 0.4
NEDD1-206ENST00000554226 CAPN2P17655 700 aa17.54■□□□□ 0.4
NEDD1-206ENST00000554226 OSBPP22059 807 aa17.54■□□□□ 0.4
NEDD1-206ENST00000554226 HOXD10P28358 340 aa17.54■□□□□ 0.4
NEDD1-206ENST00000554226 DCAF15Q66K64 600 aa17.54■□□□□ 0.4
NEDD1-206ENST00000554226 NR2E3Q9Y5X4 410 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms