RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 GSTM4Q03013 218 aa6□□□□□ -1.45
VRK1-202ENST00000553683 PPP2R3AQ06190 1150 aa6□□□□□ -1.45
VRK1-202ENST00000553683 EAPPQ56P03 285 aaPredicted RBP6□□□□□ -1.45
VRK1-202ENST00000553683 NPAS4Q8IUM7 802 aa6□□□□□ -1.45
VRK1-202ENST00000553683 SMG8Q8ND04 991 aaKnown RBP6□□□□□ -1.45
VRK1-202ENST00000553683 FAM46AQ96IP4 442 aaKnown RBP6□□□□□ -1.45
VRK1-202ENST00000553683 RUSC1Q9BVN2 902 aa6□□□□□ -1.45
VRK1-202ENST00000553683 CYP4F12Q9HCS2 524 aa6□□□□□ -1.45
VRK1-202ENST00000553683 FAM8A1Q9UBU6 413 aa6□□□□□ -1.45
VRK1-202ENST00000553683 HIF3AQ9Y2N7 669 aa6□□□□□ -1.45
VRK1-202ENST00000553683 DDX3YO15523 660 aaKnown RBP5.99□□□□□ -1.45
VRK1-202ENST00000553683 GNA15P30679 374 aa5.99□□□□□ -1.45
VRK1-202ENST00000553683 NLRP12P59046 1061 aa5.99□□□□□ -1.45
VRK1-202ENST00000553683 HGSNATQ68CP4 663 aa5.99□□□□□ -1.45
VRK1-202ENST00000553683 SCARA3Q6AZY7 606 aa5.99□□□□□ -1.45
VRK1-202ENST00000553683 NXPE4Q6UWF7 544 aa5.99□□□□□ -1.45
VRK1-202ENST00000553683 C3orf58Q8NDZ4 430 aa5.99□□□□□ -1.45
VRK1-202ENST00000553683 UBASH3BQ8TF42 649 aa5.99□□□□□ -1.45
VRK1-202ENST00000553683 TP53INP1Q96A56 240 aa5.99□□□□□ -1.45
VRK1-202ENST00000553683 CEP44Q9C0F1 390 aa5.99□□□□□ -1.45
VRK1-202ENST00000553683 C12orf49Q9H741 205 aa5.99□□□□□ -1.45
VRK1-202ENST00000553683 TMEM39AQ9NV64 488 aa5.99□□□□□ -1.45
VRK1-202ENST00000553683 DYRK3O43781 588 aa5.98□□□□□ -1.45
VRK1-202ENST00000553683 ALX3O95076 343 aa5.98□□□□□ -1.45
VRK1-202ENST00000553683 FURINP09958 794 aa5.98□□□□□ -1.45
VRK1-202ENST00000553683 GLB1P16278 677 aa5.98□□□□□ -1.45
VRK1-202ENST00000553683 FCGRTP55899 365 aa5.98□□□□□ -1.45
VRK1-202ENST00000553683 POU4F3Q15319 338 aa5.98□□□□□ -1.45
VRK1-202ENST00000553683 NUTM2GQ5VZR2 741 aa5.98□□□□□ -1.45
VRK1-202ENST00000553683 PI16Q6UXB8 463 aa5.98□□□□□ -1.45
VRK1-202ENST00000553683 PRR23CQ6ZRP0 262 aa5.98□□□□□ -1.45
VRK1-202ENST00000553683 UBL7Q96S82 380 aaPredicted RBP5.98□□□□□ -1.45
VRK1-202ENST00000553683 KRT82Q9NSB4 513 aa5.98□□□□□ -1.45
VRK1-202ENST00000553683 GSC2O15499 205 aa5.97□□□□□ -1.45
VRK1-202ENST00000553683 DHX15O43143 795 aaKnown RBP5.97□□□□□ -1.45
VRK1-202ENST00000553683 TIAF1O95411 115 aa5.97□□□□□ -1.45
VRK1-202ENST00000553683 FDX2Q6P4F2 183 aa5.97□□□□□ -1.45
VRK1-202ENST00000553683 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.97□□□□□ -1.45
VRK1-202ENST00000553683 AGGF1Q8N302 714 aaeCLIP5.97□□□□□ -1.45
VRK1-202ENST00000553683 MYRFLQ96LU7 910 aa5.97□□□□□ -1.45
VRK1-202ENST00000553683 CORO1BQ9BR76 489 aa5.97□□□□□ -1.45
VRK1-202ENST00000553683 TRIM56Q9BRZ2 755 aaKnown RBP5.97□□□□□ -1.45
VRK1-202ENST00000553683 USP26Q9BXU7 913 aa5.97□□□□□ -1.45
VRK1-202ENST00000553683 OSBPL7Q9BZF2 842 aa5.97□□□□□ -1.45
VRK1-202ENST00000553683 WWC3Q9ULE0 1092 aa5.97□□□□□ -1.45
VRK1-202ENST00000553683 AK5Q9Y6K8 562 aa5.97□□□□□ -1.45
VRK1-202ENST00000553683 SART1O43290 800 aaKnown RBP5.96□□□□□ -1.46
VRK1-202ENST00000553683 MAOBP27338 520 aa5.96□□□□□ -1.46
VRK1-202ENST00000553683 FAAP100Q0VG06 881 aa5.96□□□□□ -1.46
VRK1-202ENST00000553683 FBXO33Q7Z6M2 555 aa5.96□□□□□ -1.46
VRK1-202ENST00000553683 EMILIN2Q9BXX0 1053 aa5.96□□□□□ -1.46
VRK1-202ENST00000553683 SAMM50Q9Y512 469 aa5.96□□□□□ -1.46
VRK1-202ENST00000553683 EIF4BP23588 611 aaKnown RBP5.95□□□□□ -1.46
VRK1-202ENST00000553683 CLEC10AQ8IUN9 316 aa5.95□□□□□ -1.46
VRK1-202ENST00000553683 ARMC10Q8N2F6 343 aa5.95□□□□□ -1.46
VRK1-202ENST00000553683 UTP4Q969X6 686 aaKnown RBP5.95□□□□□ -1.46
VRK1-202ENST00000553683 NECAB3Q96P71 396 aaPredicted RBP5.95□□□□□ -1.46
VRK1-202ENST00000553683 SEMA6BQ9H3T3 888 aa5.95□□□□□ -1.46
VRK1-202ENST00000553683 RAXQ9Y2V3 346 aa5.95□□□□□ -1.46
VRK1-202ENST00000553683 DLGAP3O95886 979 aa5.94□□□□□ -1.46
VRK1-202ENST00000553683 NME2P22392 152 aa5.94□□□□□ -1.46
VRK1-202ENST00000553683 DAB2P98082 770 aa5.94□□□□□ -1.46
VRK1-202ENST00000553683 SOX4Q06945 474 aaPredicted RBP5.94□□□□□ -1.46
VRK1-202ENST00000553683 SV2BQ7L1I2 683 aa5.94□□□□□ -1.46
VRK1-202ENST00000553683 TMC4Q7Z404 712 aa5.94□□□□□ -1.46
VRK1-202ENST00000553683 FAM20CQ8IXL6 584 aa5.94□□□□□ -1.46
VRK1-202ENST00000553683 SETDB2Q96T68 719 aa5.94□□□□□ -1.46
VRK1-202ENST00000553683 DUSP9Q99956 384 aaKnown RBP5.94□□□□□ -1.46
VRK1-202ENST00000553683 GSX1Q9H4S2 264 aaPredicted RBP5.94□□□□□ -1.46
VRK1-202ENST00000553683 AKAP2Q9Y2D5 859 aa5.94□□□□□ -1.46
VRK1-202ENST00000553683 GSTP1P09211 210 aaKnown RBP5.93□□□□□ -1.46
VRK1-202ENST00000553683 ARNTP27540 789 aa5.93□□□□□ -1.46
VRK1-202ENST00000553683 PREPP48147 710 aa5.93□□□□□ -1.46
VRK1-202ENST00000553683 TMCO4Q5TGY1 634 aa5.93□□□□□ -1.46
VRK1-202ENST00000553683 PDZD3Q86UT5 571 aa5.93□□□□□ -1.46
VRK1-202ENST00000553683 C12orf50Q8NA57 414 aaPredicted RBP5.93□□□□□ -1.46
VRK1-202ENST00000553683 FAM83CQ9BQN1 747 aa5.93□□□□□ -1.46
VRK1-202ENST00000553683 YIPF2Q9BWQ6 316 aa5.93□□□□□ -1.46
VRK1-202ENST00000553683 BCL11AQ9H165 835 aa5.93□□□□□ -1.46
VRK1-202ENST00000553683 CACNA2D2Q9NY47 1150 aa5.93□□□□□ -1.46
VRK1-202ENST00000553683 STOML1Q9UBI4 398 aa5.93□□□□□ -1.46
VRK1-202ENST00000553683 GPN3Q9UHW5 284 aaPredicted RBP5.93□□□□□ -1.46
VRK1-202ENST00000553683 GAS2O43903 313 aaKnown RBP5.92□□□□□ -1.46
VRK1-202ENST00000553683 USP17L7P0C7H9 530 aa5.92□□□□□ -1.46
VRK1-202ENST00000553683 SLFN14P0C7P3 912 aa5.92□□□□□ -1.46
VRK1-202ENST00000553683 LRRC14Q15048 493 aa5.92□□□□□ -1.46
VRK1-202ENST00000553683 KIF4BQ2VIQ3 1234 aa5.92□□□□□ -1.46
VRK1-202ENST00000553683 EZH1Q92800 747 aaPredicted RBP5.92□□□□□ -1.46
VRK1-202ENST00000553683 PARP2Q9UGN5 583 aa5.92□□□□□ -1.46
VRK1-202ENST00000553683 CYP8B1Q9UNU6 501 aa5.92□□□□□ -1.46
VRK1-202ENST00000553683 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.91□□□□□ -1.46
VRK1-202ENST00000553683 ENC1O14682 589 aa5.91□□□□□ -1.46
VRK1-202ENST00000553683 AOC2O75106 756 aa5.91□□□□□ -1.46
VRK1-202ENST00000553683 ADH5P11766 374 aa5.91□□□□□ -1.46
VRK1-202ENST00000553683 RLBP1P12271 317 aa5.91□□□□□ -1.46
VRK1-202ENST00000553683 ST13P50502 369 aaKnown RBP5.91□□□□□ -1.46
VRK1-202ENST00000553683 XPCQ01831 940 aaPredicted RBP5.91□□□□□ -1.46
VRK1-202ENST00000553683 ZNF252P-AS1Q0IIN9 211 aa5.91□□□□□ -1.46
VRK1-202ENST00000553683 PRSS36Q5K4E3 855 aa5.91□□□□□ -1.46
VRK1-202ENST00000553683 SULF2Q8IWU5 870 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms