RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 RRAGCQ9HB90 399 aa6.46□□□□□ -1.38
VTI1B-202ENST00000553619 SERTAD1Q9UHV2 236 aa6.46□□□□□ -1.38
VTI1B-202ENST00000553619 GGA1Q9UJY5 639 aa6.46□□□□□ -1.38
VTI1B-202ENST00000553619 MKL2Q9ULH7 1088 aa6.46□□□□□ -1.38
VTI1B-202ENST00000553619 USP3Q9Y6I4 520 aa6.46□□□□□ -1.38
VTI1B-202ENST00000553619 ABCA3Q99758 1704 aa6.45□□□□□ -1.38
VTI1B-202ENST00000553619 CRB1P82279 1406 aa6.45□□□□□ -1.38
VTI1B-202ENST00000553619 KRBA1A5PL33 1030 aa6.45□□□□□ -1.38
VTI1B-202ENST00000553619 TMEM229AB2RXF0 380 aa6.45□□□□□ -1.38
VTI1B-202ENST00000553619 PIK3CDO00329 1044 aa6.45□□□□□ -1.38
VTI1B-202ENST00000553619 EXOC5O00471 708 aa6.45□□□□□ -1.38
VTI1B-202ENST00000553619 NEFLP07196 543 aa6.45□□□□□ -1.38
VTI1B-202ENST00000553619 HOXB4P17483 251 aaPredicted RBP6.45□□□□□ -1.38
VTI1B-202ENST00000553619 COL8A1P27658 744 aa6.45□□□□□ -1.38
VTI1B-202ENST00000553619 SMTNP53814 917 aa6.45□□□□□ -1.38
VTI1B-202ENST00000553619 TEFQ10587 303 aa6.45□□□□□ -1.38
VTI1B-202ENST00000553619 TAF7Q15545 349 aaPredicted RBP6.45□□□□□ -1.38
VTI1B-202ENST00000553619 ZNF530Q6P9A1 599 aaPredicted RBP6.45□□□□□ -1.38
VTI1B-202ENST00000553619 ERICH6Q7L0X2 663 aa6.45□□□□□ -1.38
VTI1B-202ENST00000553619 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.45□□□□□ -1.38
VTI1B-202ENST00000553619 ZCRB1Q8TBF4 217 aaKnown RBP6.45□□□□□ -1.38
VTI1B-202ENST00000553619 NIFKQ9BYG3 293 aaKnown RBP6.45□□□□□ -1.38
VTI1B-202ENST00000553619 ZCCHC2Q9C0B9 1178 aaKnown RBP6.45□□□□□ -1.38
VTI1B-202ENST00000553619 IFT57Q9NWB7 429 aa6.45□□□□□ -1.38
VTI1B-202ENST00000553619 HCN2Q9UL51 889 aa6.45□□□□□ -1.38
VTI1B-202ENST00000553619 COG6Q9Y2V7 657 aa6.45□□□□□ -1.38
VTI1B-202ENST00000553619 CCDC9Q9Y3X0 531 aaKnown RBP6.45□□□□□ -1.38
VTI1B-202ENST00000553619 LAS1LQ9Y4W2 734 aaKnown RBP6.45□□□□□ -1.38
VTI1B-202ENST00000553619 CAMTA1Q9Y6Y1 1673 aa6.45□□□□□ -1.38
VTI1B-202ENST00000553619 DLG5Q8TDM6 1919 aa6.44□□□□□ -1.38
VTI1B-202ENST00000553619 RGPD2P0DJD1 1756 aa6.44□□□□□ -1.38
VTI1B-202ENST00000553619 NCAPD2Q15021 1401 aa6.44□□□□□ -1.38
VTI1B-202ENST00000553619 DUSP27Q5VZP5 1158 aa6.44□□□□□ -1.38
VTI1B-202ENST00000553619 FIGNL1Q6PIW4 674 aa6.44□□□□□ -1.38
VTI1B-202ENST00000553619 LARP1Q6PKG0 1096 aaKnown RBP6.44□□□□□ -1.38
VTI1B-202ENST00000553619 FNBP4Q8N3X1 1017 aaPredicted RBP6.44□□□□□ -1.38
VTI1B-202ENST00000553619 C1orf216Q8TAB5 229 aa6.44□□□□□ -1.38
VTI1B-202ENST00000553619 ZNF428Q96B54 188 aa6.44□□□□□ -1.38
VTI1B-202ENST00000553619 AIDAQ96BJ3 306 aa6.44□□□□□ -1.38
VTI1B-202ENST00000553619 C8orf37Q96NL8 207 aa6.44□□□□□ -1.38
VTI1B-202ENST00000553619 USP21Q9UK80 565 aa6.44□□□□□ -1.38
VTI1B-202ENST00000553619 IQSEC3Q9UPP2 1182 aaPredicted RBP6.44□□□□□ -1.38
VTI1B-202ENST00000553619 PCDHGC4Q9Y5F7 938 aa6.44□□□□□ -1.38
VTI1B-202ENST00000553619 COL5A2P05997 1499 aaPredicted RBP6.44□□□□□ -1.38
VTI1B-202ENST00000553619 MAP3K5Q99683 1374 aa6.44□□□□□ -1.38
VTI1B-202ENST00000553619 LMO7Q8WWI1 1683 aa6.43□□□□□ -1.38
VTI1B-202ENST00000553619 NWD2Q9ULI1 1742 aa6.43□□□□□ -1.38
VTI1B-202ENST00000553619 DCDC2BA2VCK2 349 aa6.43□□□□□ -1.38
VTI1B-202ENST00000553619 RNMTO43148 476 aaKnown RBP6.43□□□□□ -1.38
VTI1B-202ENST00000553619 ADAM23O75077 832 aa6.43□□□□□ -1.38
VTI1B-202ENST00000553619 SKIP12755 728 aa6.43□□□□□ -1.38
VTI1B-202ENST00000553619 AMPD1P23109 780 aa6.43□□□□□ -1.38
VTI1B-202ENST00000553619 VPS72Q15906 364 aa6.43□□□□□ -1.38
VTI1B-202ENST00000553619 LINC00114Q6XXX2 140 aa6.43□□□□□ -1.38
VTI1B-202ENST00000553619 NLRP8Q86W28 1048 aa6.43□□□□□ -1.38
VTI1B-202ENST00000553619 SUV39H2Q9H5I1 410 aa6.43□□□□□ -1.38
VTI1B-202ENST00000553619 USP35Q9P2H5 1018 aa6.43□□□□□ -1.38
VTI1B-202ENST00000553619 RCAN3Q9UKA8 241 aa6.43□□□□□ -1.38
VTI1B-202ENST00000553619 PCDH11XQ9BZA7 1347 aa6.43□□□□□ -1.38
VTI1B-202ENST00000553619 PCDH11YQ9BZA8 1340 aa6.43□□□□□ -1.38
VTI1B-202ENST00000553619 A0A1W2PNR3 127 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 A6NJY4 79 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 NEURL1BA8MQ27 555 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 ERVV-2B6SEH9 535 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 CHL1O00533 1208 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 ATXN7O15265 892 aaPredicted RBP6.42□□□□□ -1.38
VTI1B-202ENST00000553619 LZTS3O60299 673 aaPredicted RBP6.42□□□□□ -1.38
VTI1B-202ENST00000553619 ZNF853P0CG23 659 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 ARAFP10398 606 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 EPXP11678 715 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 PHKG2P15735 406 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 CD33P20138 364 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 GRIN2CQ14957 1233 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 MTFR1Q15390 333 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 MCM10Q7L590 875 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 IL17REQ8NFR9 667 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 SLC4A9Q96Q91 983 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 TSPYL4Q9UJ04 414 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 TRPC5Q9UL62 973 aaPredicted RBP6.42□□□□□ -1.38
VTI1B-202ENST00000553619 NOD1Q9Y239 953 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 SUPT16HQ9Y5B9 1047 aaKnown RBP6.42□□□□□ -1.38
VTI1B-202ENST00000553619 PCDHGA11Q9Y5H2 935 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 SOS1Q07889 1333 aaPredicted RBP6.42□□□□□ -1.38
VTI1B-202ENST00000553619 SPATA31A1Q5TZJ5 1347 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 SPATA31A5Q5VU36 1347 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 SPATA31A7Q8IWB4 1347 aa6.42□□□□□ -1.38
VTI1B-202ENST00000553619 SLIT2O94813 1529 aa6.41□□□□□ -1.38
VTI1B-202ENST00000553619 BTBD11A6QL63 1104 aa6.41□□□□□ -1.38
VTI1B-202ENST00000553619 BACH1O14867 736 aa6.41□□□□□ -1.38
VTI1B-202ENST00000553619 MAPTP10636 758 aaKnown RBP6.41□□□□□ -1.38
VTI1B-202ENST00000553619 CABP4P57796 275 aa6.41□□□□□ -1.38
VTI1B-202ENST00000553619 DCTN1Q14203 1278 aa6.41□□□□□ -1.38
VTI1B-202ENST00000553619 DDB1Q16531 1140 aa6.41□□□□□ -1.38
VTI1B-202ENST00000553619 ARSJQ5FYB0 599 aaPredicted RBP6.41□□□□□ -1.38
VTI1B-202ENST00000553619 ZNF772Q68DY9 489 aaPredicted RBP6.41□□□□□ -1.38
VTI1B-202ENST00000553619 MPRIPQ6WCQ1 1025 aa6.41□□□□□ -1.38
VTI1B-202ENST00000553619 DDX54Q8TDD1 881 aaKnown RBP6.41□□□□□ -1.38
VTI1B-202ENST00000553619 BTBD6Q96KE9 485 aa6.41□□□□□ -1.38
VTI1B-202ENST00000553619 KAT6BQ8WYB5 2073 aa6.41□□□□□ -1.38
VTI1B-202ENST00000553619 PARP4Q9UKK3 1724 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms