RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 ADAM19Q9H013 955 aa5.73□□□□□ -1.49
TDP1-207ENST00000553617 PCDHB5Q9Y5E4 795 aa5.73□□□□□ -1.49
TDP1-207ENST00000553617 C2CD2LO14523 706 aa5.72□□□□□ -1.49
TDP1-207ENST00000553617 SIN3BO75182 1162 aa5.72□□□□□ -1.49
TDP1-207ENST00000553617 CILPO75339 1184 aa5.72□□□□□ -1.49
TDP1-207ENST00000553617 GHRHP01286 108 aa5.72□□□□□ -1.49
TDP1-207ENST00000553617 CDK11BP21127 795 aaKnown RBP5.72□□□□□ -1.49
TDP1-207ENST00000553617 NME2P22392 152 aa5.72□□□□□ -1.49
TDP1-207ENST00000553617 PCDH1Q08174 1060 aa5.72□□□□□ -1.49
TDP1-207ENST00000553617 TCEAL1Q15170 157 aa5.72□□□□□ -1.49
TDP1-207ENST00000553617 ZNF423Q2M1K9 1284 aa5.72□□□□□ -1.49
TDP1-207ENST00000553617 SEZ6Q53EL9 994 aa5.72□□□□□ -1.49
TDP1-207ENST00000553617 VN1R5Q7Z5H4 357 aa5.72□□□□□ -1.49
TDP1-207ENST00000553617 SYT9Q86SS6 491 aa5.72□□□□□ -1.49
TDP1-207ENST00000553617 FAM169BQ8N8A8 192 aa5.72□□□□□ -1.49
TDP1-207ENST00000553617 GAL3ST3Q96A11 431 aa5.72□□□□□ -1.49
TDP1-207ENST00000553617 MDFIQ99750 246 aa5.72□□□□□ -1.49
TDP1-207ENST00000553617 CYP8B1Q9UNU6 501 aa5.72□□□□□ -1.49
TDP1-207ENST00000553617 MSRB2Q9Y3D2 182 aa5.72□□□□□ -1.49
TDP1-207ENST00000553617 MRPL42Q9Y6G3 142 aaKnown RBP5.72□□□□□ -1.49
TDP1-207ENST00000553617 ENPP3O14638 875 aa5.71□□□□□ -1.5
TDP1-207ENST00000553617 PPM1GO15355 546 aaPredicted RBP5.71□□□□□ -1.5
TDP1-207ENST00000553617 SMNDC1O75940 238 aaKnown RBP eCLIP5.71□□□□□ -1.5
TDP1-207ENST00000553617 GIPRP48546 466 aa5.71□□□□□ -1.5
TDP1-207ENST00000553617 PPP2R3AQ06190 1150 aa5.71□□□□□ -1.5
TDP1-207ENST00000553617 CEP135Q66GS9 1140 aa5.71□□□□□ -1.5
TDP1-207ENST00000553617 CCDC81Q6ZN84 652 aa5.71□□□□□ -1.5
TDP1-207ENST00000553617 LRP10Q7Z4F1 713 aa5.71□□□□□ -1.5
TDP1-207ENST00000553617 STK35Q8TDR2 534 aa5.71□□□□□ -1.5
TDP1-207ENST00000553617 PLD4Q96BZ4 506 aa5.71□□□□□ -1.5
TDP1-207ENST00000553617 ANAPC16Q96DE5 110 aa5.71□□□□□ -1.5
TDP1-207ENST00000553617 UBE2OQ9C0C9 1292 aaKnown RBP5.71□□□□□ -1.5
TDP1-207ENST00000553617 MIR1-1HGQ9H1L0 117 aa5.71□□□□□ -1.5
TDP1-207ENST00000553617 AVENQ9NQS1 362 aaPredicted RBP5.71□□□□□ -1.5
TDP1-207ENST00000553617 SNTG2Q9NY99 539 aa5.71□□□□□ -1.5
TDP1-207ENST00000553617 PPT2Q9UMR5 302 aa5.71□□□□□ -1.5
TDP1-207ENST00000553617 SMAD7O15105 426 aaKnown RBP5.7□□□□□ -1.5
TDP1-207ENST00000553617 TLR3O15455 904 aaKnown RBP5.7□□□□□ -1.5
TDP1-207ENST00000553617 ESRRAP11474 423 aaPredicted RBP5.7□□□□□ -1.5
TDP1-207ENST00000553617 EIF2AK2P19525 551 aaKnown RBP5.7□□□□□ -1.5
TDP1-207ENST00000553617 HSD3B2P26439 372 aa5.7□□□□□ -1.5
TDP1-207ENST00000553617 ZNF157P51786 506 aaPredicted RBP5.7□□□□□ -1.5
TDP1-207ENST00000553617 ZNF252P-AS1Q0IIN9 211 aa5.7□□□□□ -1.5
TDP1-207ENST00000553617 SEPT6Q14141 434 aa5.7□□□□□ -1.5
TDP1-207ENST00000553617 TNNI3KQ59H18 835 aa5.7□□□□□ -1.5
TDP1-207ENST00000553617 SCARA3Q6AZY7 606 aa5.7□□□□□ -1.5
TDP1-207ENST00000553617 KANK3Q6NY19 840 aa5.7□□□□□ -1.5
TDP1-207ENST00000553617 REC114Q7Z4M0 266 aa5.7□□□□□ -1.5
TDP1-207ENST00000553617 REXO1Q8N1G1 1221 aaKnown RBP5.7□□□□□ -1.5
TDP1-207ENST00000553617 CPLX3Q8WVH0 158 aa5.7□□□□□ -1.5
TDP1-207ENST00000553617 TRIM55Q9BYV6 548 aa5.7□□□□□ -1.5
TDP1-207ENST00000553617 RBSNQ9H1K0 784 aa5.7□□□□□ -1.5
TDP1-207ENST00000553617 CACNA2D2Q9NY47 1150 aa5.7□□□□□ -1.5
TDP1-207ENST00000553617 NAGPAQ9UK23 515 aa5.7□□□□□ -1.5
TDP1-207ENST00000553617 PRR12Q9ULL5 1215 aa5.7□□□□□ -1.5
TDP1-207ENST00000553617 ZNRF3Q9ULT6 936 aa5.7□□□□□ -1.5
TDP1-207ENST00000553617 SLC6A14Q9UN76 642 aa5.7□□□□□ -1.5
TDP1-207ENST00000553617 SAMM50Q9Y512 469 aa5.7□□□□□ -1.5
TDP1-207ENST00000553617 CDC14CA4D256 554 aa5.69□□□□□ -1.5
TDP1-207ENST00000553617 FAM221BA6H8Z2 402 aa5.69□□□□□ -1.5
TDP1-207ENST00000553617 ADARB2-AS1A8MUL3 147 aa5.69□□□□□ -1.5
TDP1-207ENST00000553617 VSIG8P0DPA2 414 aa5.69□□□□□ -1.5
TDP1-207ENST00000553617 PTPRAP18433 802 aa5.69□□□□□ -1.5
TDP1-207ENST00000553617 CWF19L2Q2TBE0 894 aaKnown RBP5.69□□□□□ -1.5
TDP1-207ENST00000553617 PERM1Q5SV97 790 aa5.69□□□□□ -1.5
TDP1-207ENST00000553617 LLGL2Q6P1M3 1020 aa5.69□□□□□ -1.5
TDP1-207ENST00000553617 PDZD3Q86UT5 571 aa5.69□□□□□ -1.5
TDP1-207ENST00000553617 FAM35AQ86V20 835 aa5.69□□□□□ -1.5
TDP1-207ENST00000553617 SULF2Q8IWU5 870 aa5.69□□□□□ -1.5
TDP1-207ENST00000553617 ANKRD13AQ8IZ07 590 aa5.69□□□□□ -1.5
TDP1-207ENST00000553617 RBBP8NLQ8NC74 664 aaPredicted RBP5.69□□□□□ -1.5
TDP1-207ENST00000553617 NANOS1Q8WY41 292 aaKnown RBP5.69□□□□□ -1.5
TDP1-207ENST00000553617 RNPC3Q96LT9 517 aaKnown RBP5.69□□□□□ -1.5
TDP1-207ENST00000553617 TRERF1Q96PN7 1200 aa5.69□□□□□ -1.5
TDP1-207ENST00000553617 DEPDC7Q96QD5 511 aa5.69□□□□□ -1.5
TDP1-207ENST00000553617 SRPK1Q96SB4 655 aaKnown RBP5.69□□□□□ -1.5
TDP1-207ENST00000553617 LPIN3Q9BQK8 851 aa5.69□□□□□ -1.5
TDP1-207ENST00000553617 FRRS1LQ9P0K9 344 aa5.69□□□□□ -1.5
TDP1-207ENST00000553617 KLF15Q9UIH9 416 aa5.69□□□□□ -1.5
TDP1-207ENST00000553617 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.69□□□□□ -1.5
TDP1-207ENST00000553617 U2SURPO15042 1029 aaKnown RBP5.68□□□□□ -1.5
TDP1-207ENST00000553617 PPFIA3O75145 1194 aa5.68□□□□□ -1.5
TDP1-207ENST00000553617 CPB1P15086 417 aa5.68□□□□□ -1.5
TDP1-207ENST00000553617 ARNTP27540 789 aa5.68□□□□□ -1.5
TDP1-207ENST00000553617 ZNF165P49910 485 aa5.68□□□□□ -1.5
TDP1-207ENST00000553617 EIF6P56537 245 aaKnown RBP5.68□□□□□ -1.5
TDP1-207ENST00000553617 PCBP4P57723 403 aaKnown RBP5.68□□□□□ -1.5
TDP1-207ENST00000553617 CLCQ05315 142 aa5.68□□□□□ -1.5
TDP1-207ENST00000553617 LRRC14Q15048 493 aa5.68□□□□□ -1.5
TDP1-207ENST00000553617 CELF2-AS1Q8N7Q2 184 aa5.68□□□□□ -1.5
TDP1-207ENST00000553617 OR6P1Q8NGX9 317 aa5.68□□□□□ -1.5
TDP1-207ENST00000553617 GRIN3AQ8TCU5 1115 aa5.68□□□□□ -1.5
TDP1-207ENST00000553617 TTC9Q92623 222 aa5.68□□□□□ -1.5
TDP1-207ENST00000553617 JARID2Q92833 1246 aaPredicted RBP5.68□□□□□ -1.5
TDP1-207ENST00000553617 CCDC113Q9H0I3 377 aa5.68□□□□□ -1.5
TDP1-207ENST00000553617 IGFLR1Q9H665 355 aa5.68□□□□□ -1.5
TDP1-207ENST00000553617 EHMT1Q9H9B1 1298 aa5.68□□□□□ -1.5
TDP1-207ENST00000553617 BRMS1Q9HCU9 246 aa5.68□□□□□ -1.5
TDP1-207ENST00000553617 TRIM33Q9UPN9 1127 aa5.68□□□□□ -1.5
TDP1-207ENST00000553617 ATE1O95260 518 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms