RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 TNFAIP1Q13829 316 aa18.03■□□□□ 0.48
NEDD1-205ENST00000553609 GRIK5Q16478 980 aa18.03■□□□□ 0.48
NEDD1-205ENST00000553609 DZIP1LQ8IYY4 767 aaKnown RBP18.03■□□□□ 0.48
NEDD1-205ENST00000553609 ZNF333Q96JL9 665 aa18.03■□□□□ 0.48
NEDD1-205ENST00000553609 FAM84BQ96KN1 310 aaPredicted RBP18.03■□□□□ 0.48
NEDD1-205ENST00000553609 TTF2Q9UNY4 1162 aaKnown RBP18.03■□□□□ 0.48
NEDD1-205ENST00000553609 CEP290O15078 2479 aa18.02■□□□□ 0.48
NEDD1-205ENST00000553609 VGLL4Q14135 290 aa18.02■□□□□ 0.48
NEDD1-205ENST00000553609 UBE4AQ14139 1066 aa18.02■□□□□ 0.48
NEDD1-205ENST00000553609 CCDC57Q2TAC2 916 aa18.02■□□□□ 0.48
NEDD1-205ENST00000553609 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.02■□□□□ 0.48
NEDD1-205ENST00000553609 KAZALD1Q96I82 304 aa18.02■□□□□ 0.48
NEDD1-205ENST00000553609 TMEM39BQ9GZU3 492 aa18.02■□□□□ 0.48
NEDD1-205ENST00000553609 CNNM1Q9NRU3 951 aa18.02■□□□□ 0.48
NEDD1-205ENST00000553609 CRKP46108 304 aa18.01■□□□□ 0.47
NEDD1-205ENST00000553609 FAM43AQ8N2R8 423 aa18.01■□□□□ 0.47
NEDD1-205ENST00000553609 PUS3Q9BZE2 481 aaKnown RBP18.01■□□□□ 0.47
NEDD1-205ENST00000553609 SPINK5Q9NQ38 1064 aaPredicted RBP18.01■□□□□ 0.47
NEDD1-205ENST00000553609 CCL15-CCL14A0A0B4J2E2 113 aa18■□□□□ 0.47
NEDD1-205ENST00000553609 TCP10L2B9ZVM9 353 aa18■□□□□ 0.47
NEDD1-205ENST00000553609 HIBADHP31937 336 aaKnown RBP18■□□□□ 0.47
NEDD1-205ENST00000553609 CCL15Q16663 113 aa18■□□□□ 0.47
NEDD1-205ENST00000553609 TAF7LQ5H9L4 462 aa18■□□□□ 0.47
NEDD1-205ENST00000553609 WDR63Q8IWG1 891 aa18■□□□□ 0.47
NEDD1-205ENST00000553609 PTCH2Q9Y6C5 1203 aa18■□□□□ 0.47
NEDD1-205ENST00000553609 GTF2A2P52657 109 aa17.99■□□□□ 0.47
NEDD1-205ENST00000553609 TAF1CQ15572 869 aaPredicted RBP17.99■□□□□ 0.47
NEDD1-205ENST00000553609 SUCLG2Q96I99 432 aa17.99■□□□□ 0.47
NEDD1-205ENST00000553609 RIPOR2Q9Y4F9 1068 aa17.99■□□□□ 0.47
NEDD1-205ENST00000553609 RANBP2P49792 3224 aaKnown RBP17.99■□□□□ 0.47
NEDD1-205ENST00000553609 SPDYE5A6NIY4 337 aa17.98■□□□□ 0.47
NEDD1-205ENST00000553609 MAP3K9P80192 1104 aa17.98■□□□□ 0.47
NEDD1-205ENST00000553609 FBXO33Q7Z6M2 555 aa17.98■□□□□ 0.47
NEDD1-205ENST00000553609 SNCAIPQ9Y6H5 919 aa17.98■□□□□ 0.47
NEDD1-205ENST00000553609 ZSWIM8A7E2V4 1837 aa17.98■□□□□ 0.47
NEDD1-205ENST00000553609 SZT2Q5T011 3432 aa17.97■□□□□ 0.47
NEDD1-205ENST00000553609 ALDH1L1O75891 902 aa17.97■□□□□ 0.47
NEDD1-205ENST00000553609 FXR1P51114 621 aaKnown RBP eCLIP17.97■□□□□ 0.47
NEDD1-205ENST00000553609 OTUD5Q96G74 571 aa17.97■□□□□ 0.47
NEDD1-205ENST00000553609 ZFYVE28Q9HCC9 887 aa17.97■□□□□ 0.47
NEDD1-205ENST00000553609 CACNB3P54284 484 aa17.96■□□□□ 0.47
NEDD1-205ENST00000553609 HDLBPQ00341 1268 aaKnown RBP17.96■□□□□ 0.47
NEDD1-205ENST00000553609 SLC9C1Q4G0N8 1177 aa17.96■□□□□ 0.47
NEDD1-205ENST00000553609 ARHGAP39Q9C0H5 1083 aa17.96■□□□□ 0.47
NEDD1-205ENST00000553609 C9orf78Q9NZ63 289 aaPredicted RBP17.96■□□□□ 0.47
NEDD1-205ENST00000553609 IQSEC3Q9UPP2 1182 aaPredicted RBP17.96■□□□□ 0.47
NEDD1-205ENST00000553609 UTYO14607 1347 aa17.96■□□□□ 0.46
NEDD1-205ENST00000553609 TRIOBPQ9H2D6 2365 aa17.95■□□□□ 0.46
NEDD1-205ENST00000553609 NBPF7P0C2Y1 421 aaPredicted RBP17.95■□□□□ 0.46
NEDD1-205ENST00000553609 TNNI2P48788 182 aa17.95■□□□□ 0.46
NEDD1-205ENST00000553609 RABL6Q3YEC7 729 aaPredicted RBP17.95■□□□□ 0.46
NEDD1-205ENST00000553609 VGLL2Q8N8G2 317 aa17.95■□□□□ 0.46
NEDD1-205ENST00000553609 TMEM106CQ9BVX2 250 aa17.95■□□□□ 0.46
NEDD1-205ENST00000553609 SALL2Q9Y467 1007 aaPredicted RBP17.95■□□□□ 0.46
NEDD1-205ENST00000553609 CSADQ9Y600 493 aa17.95■□□□□ 0.46
NEDD1-205ENST00000553609 MROH5Q6ZUA9 1318 aa17.95■□□□□ 0.46
NEDD1-205ENST00000553609 TLR2O60603 784 aa17.94■□□□□ 0.46
NEDD1-205ENST00000553609 SRCIN1Q9C0H9 1055 aa17.94■□□□□ 0.46
NEDD1-205ENST00000553609 ZCCHC17Q9NP64 241 aaKnown RBP17.94■□□□□ 0.46
NEDD1-205ENST00000553609 BTBD19C9JJ37 291 aa17.93■□□□□ 0.46
NEDD1-205ENST00000553609 IRF6O14896 467 aa17.93■□□□□ 0.46
NEDD1-205ENST00000553609 LACTBP83111 547 aaPredicted RBP17.93■□□□□ 0.46
NEDD1-205ENST00000553609 CHAF1AQ13111 956 aaPredicted RBP17.93■□□□□ 0.46
NEDD1-205ENST00000553609 ARHGEF6Q15052 776 aa17.93■□□□□ 0.46
NEDD1-205ENST00000553609 LRRC24Q50LG9 513 aa17.93■□□□□ 0.46
NEDD1-205ENST00000553609 APOBEC3HQ6NTF7 200 aaKnown RBP17.93■□□□□ 0.46
NEDD1-205ENST00000553609 FAM83AQ86UY5 434 aa17.93■□□□□ 0.46
NEDD1-205ENST00000553609 ERO1BQ86YB8 467 aa17.93■□□□□ 0.46
NEDD1-205ENST00000553609 ANKRD44Q8N8A2 993 aa17.93■□□□□ 0.46
NEDD1-205ENST00000553609 ZKSCAN4Q969J2 545 aaPredicted RBP17.93■□□□□ 0.46
NEDD1-205ENST00000553609 TEKT1Q969V4 418 aa17.93■□□□□ 0.46
NEDD1-205ENST00000553609 ZDHHC15Q96MV8 337 aa17.93■□□□□ 0.46
NEDD1-205ENST00000553609 RPAP1Q9BWH6 1393 aaPredicted RBP17.92■□□□□ 0.46
NEDD1-205ENST00000553609 CETPP11597 493 aa17.92■□□□□ 0.46
NEDD1-205ENST00000553609 FKBP1CQ5VVH2 108 aa17.92■□□□□ 0.46
NEDD1-205ENST00000553609 SLC4A10Q6U841 1118 aa17.92■□□□□ 0.46
NEDD1-205ENST00000553609 NBPF11Q86T75 865 aa17.92■□□□□ 0.46
NEDD1-205ENST00000553609 SH3TC2Q8TF17 1288 aa17.92■□□□□ 0.46
NEDD1-205ENST00000553609 TBC1D22AQ8WUA7 517 aa17.92■□□□□ 0.46
NEDD1-205ENST00000553609 WRNIP1Q96S55 665 aa17.92■□□□□ 0.46
NEDD1-205ENST00000553609 MRIQ9BWK5 157 aa17.92■□□□□ 0.46
NEDD1-205ENST00000553609 BICC1Q9H694 974 aaKnown RBP17.92■□□□□ 0.46
NEDD1-205ENST00000553609 COLQQ9Y215 455 aaPredicted RBP17.92■□□□□ 0.46
NEDD1-205ENST00000553609 CTGFP29279 349 aa17.91■□□□□ 0.46
NEDD1-205ENST00000553609 PPIL2Q13356 520 aa17.91■□□□□ 0.46
NEDD1-205ENST00000553609 MRS2Q9HD23 443 aa17.91■□□□□ 0.46
NEDD1-205ENST00000553609 PDE8BO95263 885 aa17.9■□□□□ 0.46
NEDD1-205ENST00000553609 MYCP01106 439 aaPredicted RBP17.9■□□□□ 0.46
NEDD1-205ENST00000553609 BCAMP50895 628 aa17.9■□□□□ 0.46
NEDD1-205ENST00000553609 SNAPC2Q13487 334 aa17.9■□□□□ 0.46
NEDD1-205ENST00000553609 SLC4A8Q2Y0W8 1093 aa17.9■□□□□ 0.46
NEDD1-205ENST00000553609 VPS37DQ86XT2 251 aa17.9■□□□□ 0.46
NEDD1-205ENST00000553609 SHISA4Q96DD7 197 aa17.9■□□□□ 0.46
NEDD1-205ENST00000553609 ADGRA2Q96PE1 1338 aa17.9■□□□□ 0.46
NEDD1-205ENST00000553609 FGFR2P21802 821 aa17.89■□□□□ 0.45
NEDD1-205ENST00000553609 METTL24Q5JXM2 366 aa17.89■□□□□ 0.45
NEDD1-205ENST00000553609 C17orf99Q6UX52 265 aa17.89■□□□□ 0.45
NEDD1-205ENST00000553609 KIF16BQ96L93 1317 aa17.89■□□□□ 0.45
NEDD1-205ENST00000553609 H0YGN5 161 aa17.88■□□□□ 0.45
NEDD1-205ENST00000553609 GNRH1P01148 92 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms