RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 SERPINA10Q9UK55 444 aa28■■■□□ 2.07
TDP1-206ENST00000553569 SUGT1Q9Y2Z0 365 aa28■■■□□ 2.07
TDP1-206ENST00000553569 PDS5AQ29RF7 1337 aaKnown RBP27.99■■■□□ 2.07
TDP1-206ENST00000553569 SALL1Q9NSC2 1324 aa27.99■■■□□ 2.07
TDP1-206ENST00000553569 SPDYE2BA6NHP3 402 aa27.99■■■□□ 2.07
TDP1-206ENST00000553569 ZBTB22O15209 634 aa27.99■■■□□ 2.07
TDP1-206ENST00000553569 SPDYE6P0CI01 402 aa27.99■■■□□ 2.07
TDP1-206ENST00000553569 PRDX5P30044 214 aa27.99■■■□□ 2.07
TDP1-206ENST00000553569 MCAMP43121 646 aa27.99■■■□□ 2.07
TDP1-206ENST00000553569 IRX6P78412 446 aaPredicted RBP27.99■■■□□ 2.07
TDP1-206ENST00000553569 SPATA5Q8NB90 893 aa27.99■■■□□ 2.07
TDP1-206ENST00000553569 PITPNM2Q9BZ72 1349 aa27.98■■■□□ 2.07
TDP1-206ENST00000553569 LDHBP07195 334 aaKnown RBP27.98■■■□□ 2.07
TDP1-206ENST00000553569 ZNF408Q9H9D4 720 aa27.98■■■□□ 2.07
TDP1-206ENST00000553569 ABCF2Q9UG63 623 aa27.98■■■□□ 2.07
TDP1-206ENST00000553569 AOX1Q06278 1338 aa27.97■■■□□ 2.07
TDP1-206ENST00000553569 CLRN2A0PK11 232 aa27.97■■■□□ 2.07
TDP1-206ENST00000553569 ZGPATQ8N5A5 531 aaKnown RBP27.97■■■□□ 2.07
TDP1-206ENST00000553569 TEKT1Q969V4 418 aa27.97■■■□□ 2.07
TDP1-206ENST00000553569 PRMT6Q96LA8 375 aaPredicted RBP27.97■■■□□ 2.07
TDP1-206ENST00000553569 LRRCC1Q9C099 1032 aa27.97■■■□□ 2.07
TDP1-206ENST00000553569 SNRKQ9NRH2 765 aa27.97■■■□□ 2.07
TDP1-206ENST00000553569 AKAP11Q9UKA4 1901 aa27.96■■■□□ 2.07
TDP1-206ENST00000553569 MYO1BO43795 1136 aa27.96■■■□□ 2.07
TDP1-206ENST00000553569 SMARCA5O60264 1052 aaPredicted RBP27.96■■■□□ 2.07
TDP1-206ENST00000553569 IFIT2P09913 472 aaKnown RBP27.96■■■□□ 2.07
TDP1-206ENST00000553569 DCTPP1Q9H773 170 aa27.96■■■□□ 2.07
TDP1-206ENST00000553569 TMEM88BA6NKF7 163 aa27.95■■■□□ 2.06
TDP1-206ENST00000553569 CELF2O95319 508 aaKnown RBP27.95■■■□□ 2.06
TDP1-206ENST00000553569 HDLBPQ00341 1268 aaKnown RBP27.95■■■□□ 2.06
TDP1-206ENST00000553569 CREBZFQ9NS37 354 aa27.95■■■□□ 2.06
TDP1-206ENST00000553569 DIXDC1Q155Q3 683 aa27.94■■■□□ 2.06
TDP1-206ENST00000553569 APOBEC3FQ8IUX4 373 aaKnown RBP27.94■■■□□ 2.06
TDP1-206ENST00000553569 VEZTQ9HBM0 779 aa27.94■■■□□ 2.06
TDP1-206ENST00000553569 AAMPQ13685 434 aa27.93■■■□□ 2.06
TDP1-206ENST00000553569 TBC1D9Q6ZT07 1266 aa27.93■■■□□ 2.06
TDP1-206ENST00000553569 DZIP1Q86YF9 867 aaKnown RBP27.93■■■□□ 2.06
TDP1-206ENST00000553569 MYH2Q9UKX2 1941 aa27.92■■■□□ 2.06
TDP1-206ENST00000553569 CST9Q5W186 159 aa27.92■■■□□ 2.06
TDP1-206ENST00000553569 SPTY2D1Q68D10 685 aaPredicted RBP27.92■■■□□ 2.06
TDP1-206ENST00000553569 CDCA5Q96FF9 252 aa27.92■■■□□ 2.06
TDP1-206ENST00000553569 ZNF512BQ96KM6 892 aaPredicted RBP27.92■■■□□ 2.06
TDP1-206ENST00000553569 TDRD3Q9H7E2 651 aaKnown RBP27.92■■■□□ 2.06
TDP1-206ENST00000553569 ERICH6Q7L0X2 663 aa27.91■■■□□ 2.06
TDP1-206ENST00000553569 ZDHHC15Q96MV8 337 aa27.91■■■□□ 2.06
TDP1-206ENST00000553569 ZAP70P43403 619 aa27.9■■■□□ 2.06
TDP1-206ENST00000553569 SPDYE2Q495Y8 402 aa27.9■■■□□ 2.06
TDP1-206ENST00000553569 PRAMEF18Q5VWM3 479 aa27.9■■■□□ 2.06
TDP1-206ENST00000553569 HHIPL2Q6UWX4 724 aa27.9■■■□□ 2.06
TDP1-206ENST00000553569 ZNF70Q9UC06 446 aaPredicted RBP27.9■■■□□ 2.06
TDP1-206ENST00000553569 ABT1Q9ULW3 272 aaKnown RBP27.9■■■□□ 2.06
TDP1-206ENST00000553569 MRIQ9BWK5 157 aa27.89■■■□□ 2.06
TDP1-206ENST00000553569 RAI14Q9P0K7 980 aa27.89■■■□□ 2.06
TDP1-206ENST00000553569 DAGLAQ9Y4D2 1042 aa27.89■■■□□ 2.06
TDP1-206ENST00000553569 MYO5AQ9Y4I1 1855 aaKnown RBP27.89■■■□□ 2.05
TDP1-206ENST00000553569 MAST2Q6P0Q8 1798 aa27.88■■■□□ 2.05
TDP1-206ENST00000553569 LRP2BPQ9P2M1 347 aa27.88■■■□□ 2.05
TDP1-206ENST00000553569 NDUFB9Q9Y6M9 179 aa27.88■■■□□ 2.05
TDP1-206ENST00000553569 CYP2E1P05181 493 aaPredicted RBP27.87■■■□□ 2.05
TDP1-206ENST00000553569 MECOMQ03112 1051 aa27.87■■■□□ 2.05
TDP1-206ENST00000553569 HDAC1Q13547 482 aaPredicted RBP27.87■■■□□ 2.05
TDP1-206ENST00000553569 APOBEC3HQ6NTF7 200 aaKnown RBP27.87■■■□□ 2.05
TDP1-206ENST00000553569 DEFB129Q9H1M3 183 aa27.86■■■□□ 2.05
TDP1-206ENST00000553569 TMOD2Q9NZR1 351 aa27.86■■■□□ 2.05
TDP1-206ENST00000553569 MKRN1Q9UHC7 482 aaKnown RBP27.86■■■□□ 2.05
TDP1-206ENST00000553569 TCP10L2B9ZVM9 353 aa27.85■■■□□ 2.05
TDP1-206ENST00000553569 CACNB3P54284 484 aa27.85■■■□□ 2.05
TDP1-206ENST00000553569 PIH1D3Q9NQM4 214 aaKnown RBP27.85■■■□□ 2.05
TDP1-206ENST00000553569 SLF2Q8IX21 1173 aa27.84■■■□□ 2.05
TDP1-206ENST00000553569 GBA2Q9HCG7 927 aaPredicted RBP27.84■■■□□ 2.05
TDP1-206ENST00000553569 TNFAIP1Q13829 316 aa27.83■■■□□ 2.05
TDP1-206ENST00000553569 ZNF384Q8TF68 577 aa27.83■■■□□ 2.05
TDP1-206ENST00000553569 NSUN4Q96CB9 384 aaKnown RBP27.83■■■□□ 2.05
TDP1-206ENST00000553569 DNAJC2Q99543 621 aaKnown RBP27.83■■■□□ 2.05
TDP1-206ENST00000553569 TLL2Q9Y6L7 1015 aa27.83■■■□□ 2.05
TDP1-206ENST00000553569 MROH7-TTC4A0A0A0MT08 1334 aa27.83■■■□□ 2.05
TDP1-206ENST00000553569 GAKO14976 1311 aa27.83■■■□□ 2.05
TDP1-206ENST00000553569 GSTO1P78417 241 aa27.82■■■□□ 2.04
TDP1-206ENST00000553569 RASA3Q14644 834 aa27.82■■■□□ 2.04
TDP1-206ENST00000553569 RWDD1Q9H446 243 aaPredicted RBP27.82■■■□□ 2.04
TDP1-206ENST00000553569 PPP2R3BQ9Y5P8 575 aa27.82■■■□□ 2.04
TDP1-206ENST00000553569 DOCK2Q92608 1830 aa27.82■■■□□ 2.04
TDP1-206ENST00000553569 CNTNAP1P78357 1384 aa27.82■■■□□ 2.04
TDP1-206ENST00000553569 PAPPA2Q9BXP8 1791 aa27.81■■■□□ 2.04
TDP1-206ENST00000553569 NF2P35240 595 aa27.81■■■□□ 2.04
TDP1-206ENST00000553569 CDC42EP5Q6NZY7 148 aa27.81■■■□□ 2.04
TDP1-206ENST00000553569 PAXIP1Q6ZW49 1069 aaPredicted RBP27.81■■■□□ 2.04
TDP1-206ENST00000553569 DNAJC5GQ8N7S2 189 aa27.81■■■□□ 2.04
TDP1-206ENST00000553569 C2orf69Q8N8R5 385 aa27.81■■■□□ 2.04
TDP1-206ENST00000553569 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.81■■■□□ 2.04
TDP1-206ENST00000553569 GCC1Q96CN9 775 aa27.81■■■□□ 2.04
TDP1-206ENST00000553569 KLRG1Q96E93 195 aa27.81■■■□□ 2.04
TDP1-206ENST00000553569 ANTXR1Q9H6X2 564 aa27.81■■■□□ 2.04
TDP1-206ENST00000553569 ZBTB47Q9UFB7 747 aaPredicted RBP27.81■■■□□ 2.04
TDP1-206ENST00000553569 IDH1O75874 414 aaKnown RBP27.8■■■□□ 2.04
TDP1-206ENST00000553569 BTDP43251 543 aa27.8■■■□□ 2.04
TDP1-206ENST00000553569 TNNI2P48788 182 aa27.8■■■□□ 2.04
TDP1-206ENST00000553569 BOLA2Q9H3K6 86 aa27.8■■■□□ 2.04
TDP1-206ENST00000553569 USP40Q9NVE5 1235 aa27.8■■■□□ 2.04
TDP1-206ENST00000553569 RASSF10A6NK89 507 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms