RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 PGBD1Q96JS3 809 aa15.12■□□□□ 0.01
SHMT2-205ENST00000553474 MRVI1Q9Y6F6 885 aa15.12■□□□□ 0.01
SHMT2-205ENST00000553474 FOXP2O15409 715 aa15.11■□□□□ 0.01
SHMT2-205ENST00000553474 GPAA1O43292 621 aa15.11■□□□□ 0.01
SHMT2-205ENST00000553474 TRDNQ13061 729 aa15.11■□□□□ 0.01
SHMT2-205ENST00000553474 HLFQ16534 295 aa15.11■□□□□ 0.01
SHMT2-205ENST00000553474 SLC27A3Q5K4L6 730 aa15.11■□□□□ 0.01
SHMT2-205ENST00000553474 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-205ENST00000553474 GREM2Q9H772 168 aa15.11■□□□□ 0.01
SHMT2-205ENST00000553474 TRMT112Q9UI30 125 aaKnown RBP15.11■□□□□ 0.01
SHMT2-205ENST00000553474 DOCK2Q92608 1830 aa15.11■□□□□ 0.01
SHMT2-205ENST00000553474 UBR3Q6ZT12 1888 aa15.11■□□□□ 0.01
SHMT2-205ENST00000553474 MCAMP43121 646 aa15.11■□□□□ 0.01
SHMT2-205ENST00000553474 PUM3Q15397 648 aaKnown RBP15.11■□□□□ 0.01
SHMT2-205ENST00000553474 BRAPQ7Z569 592 aa15.11■□□□□ 0.01
SHMT2-205ENST00000553474 ZNF34Q8IZ26 560 aa15.11■□□□□ 0.01
SHMT2-205ENST00000553474 PROM2Q8N271 834 aa15.11■□□□□ 0.01
SHMT2-205ENST00000553474 LPIN2Q92539 896 aa15.11■□□□□ 0.01
SHMT2-205ENST00000553474 CAMKK2Q96RR4 588 aa15.11■□□□□ 0.01
SHMT2-205ENST00000553474 TBC1D2BQ9UPU7 963 aa15.11■□□□□ 0.01
SHMT2-205ENST00000553474 PRC1O43663 620 aa15.1■□□□□ 0.01
SHMT2-205ENST00000553474 NR1I2O75469 434 aa15.1■□□□□ 0.01
SHMT2-205ENST00000553474 CRKLP46109 303 aaKnown RBP15.1■□□□□ 0.01
SHMT2-205ENST00000553474 SCARF1Q14162 830 aa15.1■□□□□ 0.01
SHMT2-205ENST00000553474 SLFNL1Q499Z3 407 aa15.1■□□□□ 0.01
SHMT2-205ENST00000553474 PUS7LQ9H0K6 701 aaKnown RBP15.1■□□□□ 0.01
SHMT2-205ENST00000553474 LAMB2P55268 1798 aa15.1■□□□□ 0.01
SHMT2-205ENST00000553474 CCT2P78371 535 aaKnown RBP15.09■□□□□ 0.01
SHMT2-205ENST00000553474 ALX1Q15699 326 aa15.09■□□□□ 0.01
SHMT2-205ENST00000553474 CCDC73Q6ZRK6 1079 aa15.09■□□□□ 0.01
SHMT2-205ENST00000553474 DZIP3Q86Y13 1208 aaKnown RBP15.09■□□□□ 0.01
SHMT2-205ENST00000553474 TDRD7Q8NHU6 1098 aaKnown RBP15.09■□□□□ 0.01
SHMT2-205ENST00000553474 ZBTB1Q9Y2K1 713 aa15.09■□□□□ 0.01
SHMT2-205ENST00000553474 RTL9Q8NET4 1388 aa15.09■□□□□ 0.01
SHMT2-205ENST00000553474 DTNBO60941 627 aa15.08■□□□□ 0.01
SHMT2-205ENST00000553474 CDKL5O76039 1030 aa15.08■□□□□ 0.01
SHMT2-205ENST00000553474 GPTP24298 496 aa15.08■□□□□ 0.01
SHMT2-205ENST00000553474 FAM160A1Q05DH4 1040 aa15.08■□□□□ 0.01
SHMT2-205ENST00000553474 CAMK4Q16566 473 aa15.08■□□□□ 0.01
SHMT2-205ENST00000553474 PARP10Q53GL7 1025 aa15.08■□□□□ 0.01
SHMT2-205ENST00000553474 SLC9C2Q5TAH2 1124 aa15.08■□□□□ 0.01
SHMT2-205ENST00000553474 TTLL5Q6EMB2 1281 aa15.08■□□□□ 0.01
SHMT2-205ENST00000553474 CCDC87Q9NVE4 849 aa15.08■□□□□ 0.01
SHMT2-205ENST00000553474 RTEL1Q9NZ71 1219 aa15.08■□□□□ 0.01
SHMT2-205ENST00000553474 C4AP0C0L4 1744 aa15.08■□□□□ 0
SHMT2-205ENST00000553474 A0A1W2PQ27 194 aa15.08■□□□□ 0
SHMT2-205ENST00000553474 A0A1W2PQ64 194 aa15.08■□□□□ 0
SHMT2-205ENST00000553474 A0A1W2PQD8 194 aa15.08■□□□□ 0
SHMT2-205ENST00000553474 GNPATO15228 680 aa15.08■□□□□ 0
SHMT2-205ENST00000553474 RRP9O43818 475 aaKnown RBP15.08■□□□□ 0
SHMT2-205ENST00000553474 YEATS4O95619 227 aa15.08■□□□□ 0
SHMT2-205ENST00000553474 FGFR2P21802 821 aa15.08■□□□□ 0
SHMT2-205ENST00000553474 TPRNQ4KMQ1 711 aa15.08■□□□□ 0
SHMT2-205ENST00000553474 ANO6Q4KMQ2 910 aa15.08■□□□□ 0
SHMT2-205ENST00000553474 FBXO18Q8NFZ0 1043 aa15.08■□□□□ 0
SHMT2-205ENST00000553474 KCNG4Q8TDN1 519 aa15.08■□□□□ 0
SHMT2-205ENST00000553474 TMEM87BQ96K49 555 aa15.08■□□□□ 0
SHMT2-205ENST00000553474 SPTLC3Q9NUV7 552 aa15.08■□□□□ 0
SHMT2-205ENST00000553474 POLR3EQ9NVU0 708 aa15.08■□□□□ 0
SHMT2-205ENST00000553474 CHD4Q14839 1912 aa15.07■□□□□ 0
SHMT2-205ENST00000553474 KLF18A0A0U1RQI7 1052 aa15.07■□□□□ 0
SHMT2-205ENST00000553474 CPLX1O14810 134 aa15.07■□□□□ 0
SHMT2-205ENST00000553474 FDPSP14324 419 aaKnown RBP15.07■□□□□ 0
SHMT2-205ENST00000553474 ZNF165P49910 485 aa15.07■□□□□ 0
SHMT2-205ENST00000553474 EIF5P55010 431 aaKnown RBP15.07■□□□□ 0
SHMT2-205ENST00000553474 CCDC102BQ68D86 513 aa15.07■□□□□ 0
SHMT2-205ENST00000553474 ADALQ6DHV7 355 aa15.07■□□□□ 0
SHMT2-205ENST00000553474 CBX8Q9HC52 389 aa15.07■□□□□ 0
SHMT2-205ENST00000553474 NCOA5Q9HCD5 579 aaKnown RBP15.07■□□□□ 0
SHMT2-205ENST00000553474 ANGEL1Q9UNK9 670 aaKnown RBP15.07■□□□□ 0
SHMT2-205ENST00000553474 KINO60870 393 aaKnown RBP15.06■□□□□ 0
SHMT2-205ENST00000553474 SLC5A1P13866 664 aa15.06■□□□□ 0
SHMT2-205ENST00000553474 STX1AQ16623 288 aa15.06■□□□□ 0
SHMT2-205ENST00000553474 CPLX2Q6PUV4 134 aaKnown RBP15.06■□□□□ 0
SHMT2-205ENST00000553474 CCAR1Q8IX12 1150 aaKnown RBP15.06■□□□□ 0
SHMT2-205ENST00000553474 CKAP2LQ8IYA6 745 aa15.06■□□□□ 0
SHMT2-205ENST00000553474 C8orf76Q96K31 380 aa15.06■□□□□ 0
SHMT2-205ENST00000553474 PRIMPOLQ96LW4 560 aa15.06■□□□□ 0
SHMT2-205ENST00000553474 CCDC85AQ96PX6 553 aaPredicted RBP15.06■□□□□ 0
SHMT2-205ENST00000553474 USP28Q96RU2 1077 aa15.06■□□□□ 0
SHMT2-205ENST00000553474 NAP1L2Q9ULW6 460 aaPredicted RBP15.06■□□□□ 0
SHMT2-205ENST00000553474 CNTNAP4Q9C0A0 1308 aa15.06■□□□□ 0
SHMT2-205ENST00000553474 MYO5AQ9Y4I1 1855 aaKnown RBP15.06■□□□□ 0
SHMT2-205ENST00000553474 A0A0G2JLW4 131 aa15.06■□□□□ 0
SHMT2-205ENST00000553474 GOLGA8BA8MQT2 603 aa15.06■□□□□ 0
SHMT2-205ENST00000553474 CDC25BP30305 580 aa15.06■□□□□ 0
SHMT2-205ENST00000553474 NOLC1Q14978 699 aaKnown RBP eCLIP15.06■□□□□ 01e-8■■■□□ 15.5
SHMT2-205ENST00000553474 INTS5Q6P9B9 1019 aaKnown RBP15.06■□□□□ 0
SHMT2-205ENST00000553474 SARM1Q6SZW1 724 aa15.06■□□□□ 0
SHMT2-205ENST00000553474 SMIM5Q71RC9 77 aa15.06■□□□□ 0
SHMT2-205ENST00000553474 ENGASEQ8NFI3 743 aa15.06■□□□□ 0
SHMT2-205ENST00000553474 MTA3Q9BTC8 594 aa15.06■□□□□ 0
SHMT2-205ENST00000553474 HPS5Q9UPZ3 1129 aa15.06■□□□□ 0
SHMT2-205ENST00000553474 R3HCC1Q9Y3T6 440 aaKnown RBP15.06■□□□□ 0
SHMT2-205ENST00000553474 UBN2Q6ZU65 1347 aa15.05■□□□□ 0
SHMT2-205ENST00000553474 GNAT2P19087 354 aa15.05■□□□□ -0
SHMT2-205ENST00000553474 ANTXR2P58335 489 aa15.05■□□□□ -0
SHMT2-205ENST00000553474 HAND2P61296 217 aa15.05■□□□□ -0
SHMT2-205ENST00000553474 PLCB2Q00722 1185 aa15.05■□□□□ -0
SHMT2-205ENST00000553474 MAP3K12Q12852 859 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms