RNA–Protein interactions for RNA: ENST00000553438.1

IFT43-205, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 472 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-205ENST00000553438 OTOFQ9HC10 1997 aa12.96□□□□□ -0.34
IFT43-205ENST00000553438 CEP290O15078 2479 aa12.95□□□□□ -0.34
IFT43-205ENST00000553438 TCP10L2B9ZVM9 353 aa12.95□□□□□ -0.34
IFT43-205ENST00000553438 F6X3S4 739 aa12.95□□□□□ -0.34
IFT43-205ENST00000553438 GTF2A2P52657 109 aa12.95□□□□□ -0.34
IFT43-205ENST00000553438 VGLL4Q14135 290 aa12.95□□□□□ -0.34
IFT43-205ENST00000553438 SLC9C1Q4G0N8 1177 aa12.95□□□□□ -0.34
IFT43-205ENST00000553438 NBPF11Q86T75 865 aa12.95□□□□□ -0.34
IFT43-205ENST00000553438 FAM43AQ8N2R8 423 aa12.95□□□□□ -0.34
IFT43-205ENST00000553438 TDRD7Q8NHU6 1098 aaKnown RBP12.95□□□□□ -0.34
IFT43-205ENST00000553438 TMEM39BQ9GZU3 492 aa12.95□□□□□ -0.34
IFT43-205ENST00000553438 FANCIQ9NVI1 1328 aa12.94□□□□□ -0.34
IFT43-205ENST00000553438 GRM8O00222 908 aa12.94□□□□□ -0.34
IFT43-205ENST00000553438 VAMP4O75379 141 aa12.94□□□□□ -0.34
IFT43-205ENST00000553438 HIBADHP31937 336 aaKnown RBP12.94□□□□□ -0.34
IFT43-205ENST00000553438 CRKP46108 304 aa12.94□□□□□ -0.34
IFT43-205ENST00000553438 GYG1P46976 350 aa12.94□□□□□ -0.34
IFT43-205ENST00000553438 UBE4AQ14139 1066 aa12.94□□□□□ -0.34
IFT43-205ENST00000553438 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.94□□□□□ -0.34
IFT43-205ENST00000553438 OTUD5Q96G74 571 aa12.94□□□□□ -0.34
IFT43-205ENST00000553438 CSADQ9Y600 493 aa12.94□□□□□ -0.34
IFT43-205ENST00000553438 TRIOBPQ9H2D6 2365 aa12.93□□□□□ -0.34
IFT43-205ENST00000553438 CACNA1FO60840 1977 aa12.93□□□□□ -0.34
IFT43-205ENST00000553438 TNNI2P48788 182 aa12.93□□□□□ -0.34
IFT43-205ENST00000553438 SLC4A8Q2Y0W8 1093 aa12.93□□□□□ -0.34
IFT43-205ENST00000553438 CCDC184Q52MB2 194 aa12.93□□□□□ -0.34
IFT43-205ENST00000553438 FAM84BQ96KN1 310 aaPredicted RBP12.93□□□□□ -0.34
IFT43-205ENST00000553438 COLQQ9Y215 455 aaPredicted RBP12.93□□□□□ -0.34
IFT43-205ENST00000553438 SPDYE5A6NIY4 337 aa12.92□□□□□ -0.34
IFT43-205ENST00000553438 WDHD1O75717 1129 aaPredicted RBP12.92□□□□□ -0.34
IFT43-205ENST00000553438 MYCP01106 439 aaPredicted RBP12.92□□□□□ -0.34
IFT43-205ENST00000553438 TLR2O60603 784 aa12.91□□□□□ -0.34
IFT43-205ENST00000553438 EXOSC9Q06265 439 aaKnown RBP12.91□□□□□ -0.34
IFT43-205ENST00000553438 GRIK5Q16478 980 aa12.91□□□□□ -0.34
IFT43-205ENST00000553438 NCBP3Q53F19 620 aaKnown RBP12.91□□□□□ -0.34
IFT43-205ENST00000553438 SH3TC2Q8TF17 1288 aa12.91□□□□□ -0.34
IFT43-205ENST00000553438 PUS3Q9BZE2 481 aaKnown RBP12.91□□□□□ -0.34
IFT43-205ENST00000553438 ARHGAP39Q9C0H5 1083 aa12.91□□□□□ -0.34
IFT43-205ENST00000553438 C9orf78Q9NZ63 289 aaPredicted RBP12.91□□□□□ -0.34
IFT43-205ENST00000553438 SNCAIPQ9Y6H5 919 aa12.91□□□□□ -0.34
IFT43-205ENST00000553438 CETPP11597 493 aa12.9□□□□□ -0.34
IFT43-205ENST00000553438 CACNB3P54284 484 aa12.9□□□□□ -0.34
IFT43-205ENST00000553438 HDLBPQ00341 1268 aaKnown RBP12.9□□□□□ -0.34
IFT43-205ENST00000553438 CHAF1AQ13111 956 aaPredicted RBP12.9□□□□□ -0.34
IFT43-205ENST00000553438 KIF22Q14807 665 aa12.9□□□□□ -0.34
IFT43-205ENST00000553438 ERO1BQ86YB8 467 aa12.9□□□□□ -0.34
IFT43-205ENST00000553438 ZCCHC17Q9NP64 241 aaKnown RBP12.9□□□□□ -0.34
IFT43-205ENST00000553438 IQSEC3Q9UPP2 1182 aaPredicted RBP12.9□□□□□ -0.34
IFT43-205ENST00000553438 ARAP2Q8WZ64 1704 aa12.9□□□□□ -0.34
IFT43-205ENST00000553438 BTBD19C9JJ37 291 aa12.89□□□□□ -0.35
IFT43-205ENST00000553438 H0YGN5 161 aa12.89□□□□□ -0.35
IFT43-205ENST00000553438 IRF6O14896 467 aa12.89□□□□□ -0.35
IFT43-205ENST00000553438 ALDH1L1O75891 902 aa12.89□□□□□ -0.35
IFT43-205ENST00000553438 LACTBP83111 547 aaPredicted RBP12.89□□□□□ -0.35
IFT43-205ENST00000553438 SNAPC2Q13487 334 aa12.89□□□□□ -0.35
IFT43-205ENST00000553438 FBXO33Q7Z6M2 555 aa12.89□□□□□ -0.35
IFT43-205ENST00000553438 VPS37DQ86XT2 251 aa12.89□□□□□ -0.35
IFT43-205ENST00000553438 WDR63Q8IWG1 891 aa12.89□□□□□ -0.35
IFT43-205ENST00000553438 TBC1D22AQ8WUA7 517 aa12.89□□□□□ -0.35
IFT43-205ENST00000553438 SUCLG2Q96I99 432 aa12.89□□□□□ -0.35
IFT43-205ENST00000553438 WRNIP1Q96S55 665 aa12.89□□□□□ -0.35
IFT43-205ENST00000553438 TMOD2Q9NZR1 351 aa12.89□□□□□ -0.35
IFT43-205ENST00000553438 RIPOR2Q9Y4F9 1068 aa12.89□□□□□ -0.35
IFT43-205ENST00000553438 MROH5Q6ZUA9 1318 aa12.88□□□□□ -0.35
IFT43-205ENST00000553438 GNRH1P01148 92 aa12.88□□□□□ -0.35
IFT43-205ENST00000553438 PRMT2P55345 433 aa12.88□□□□□ -0.35
IFT43-205ENST00000553438 PPIL2Q13356 520 aa12.88□□□□□ -0.35
IFT43-205ENST00000553438 SLC4A10Q6U841 1118 aa12.88□□□□□ -0.35
IFT43-205ENST00000553438 ZKSCAN4Q969J2 545 aaPredicted RBP12.88□□□□□ -0.35
IFT43-205ENST00000553438 TEKT1Q969V4 418 aa12.88□□□□□ -0.35
IFT43-205ENST00000553438 KAZALD1Q96I82 304 aa12.88□□□□□ -0.35
IFT43-205ENST00000553438 SALL2Q9Y467 1007 aaPredicted RBP12.88□□□□□ -0.35
IFT43-205ENST00000553438 ZSWIM8A7E2V4 1837 aa12.88□□□□□ -0.35
IFT43-205ENST00000553438 FRAT2O75474 233 aaPredicted RBP12.87□□□□□ -0.35
IFT43-205ENST00000553438 ECM2O94769 699 aaPredicted RBP12.87□□□□□ -0.35
IFT43-205ENST00000553438 CAVIN4Q5BKX8 364 aa12.87□□□□□ -0.35
IFT43-205ENST00000553438 FKBP1CQ5VVH2 108 aa12.87□□□□□ -0.35
IFT43-205ENST00000553438 FAM83AQ86UY5 434 aa12.87□□□□□ -0.35
IFT43-205ENST00000553438 HOOK2Q96ED9 719 aa12.87□□□□□ -0.35
IFT43-205ENST00000553438 ZDHHC15Q96MV8 337 aa12.87□□□□□ -0.35
IFT43-205ENST00000553438 SRCIN1Q9C0H9 1055 aa12.87□□□□□ -0.35
IFT43-205ENST00000553438 MTFR1Q15390 333 aa12.86□□□□□ -0.35
IFT43-205ENST00000553438 METTL24Q5JXM2 366 aa12.86□□□□□ -0.35
IFT43-205ENST00000553438 DCAF15Q66K64 600 aa12.86□□□□□ -0.35
IFT43-205ENST00000553438 APOBEC3HQ6NTF7 200 aaKnown RBP12.86□□□□□ -0.35
IFT43-205ENST00000553438 C17orf99Q6UX52 265 aa12.86□□□□□ -0.35
IFT43-205ENST00000553438 SHISA4Q96DD7 197 aa12.86□□□□□ -0.35
IFT43-205ENST00000553438 MRIQ9BWK5 157 aa12.86□□□□□ -0.35
IFT43-205ENST00000553438 RPAP1Q9BWH6 1393 aaPredicted RBP12.85□□□□□ -0.35
IFT43-205ENST00000553438 NBPF7P0C2Y1 421 aaPredicted RBP12.85□□□□□ -0.35
IFT43-205ENST00000553438 CTGFP29279 349 aa12.85□□□□□ -0.35
IFT43-205ENST00000553438 PSMC4P43686 418 aa12.85□□□□□ -0.35
IFT43-205ENST00000553438 BCAMP50895 628 aa12.85□□□□□ -0.35
IFT43-205ENST00000553438 PPATQ06203 517 aa12.85□□□□□ -0.35
IFT43-205ENST00000553438 LRRC24Q50LG9 513 aa12.85□□□□□ -0.35
IFT43-205ENST00000553438 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
IFT43-205ENST00000553438 MIGA2Q7L4E1 593 aa12.85□□□□□ -0.35
IFT43-205ENST00000553438 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.85□□□□□ -0.35
IFT43-205ENST00000553438 ZNF341Q9BYN7 854 aa12.85□□□□□ -0.35
IFT43-205ENST00000553438 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms