RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 TNNI2P48788 182 aa11.8□□□□□ -0.52
CHD8-203ENST00000553283 HDLBPQ00341 1268 aaKnown RBP11.8□□□□□ -0.52
CHD8-203ENST00000553283 GRIK5Q16478 980 aa11.8□□□□□ -0.52
CHD8-203ENST00000553283 CAVIN4Q5BKX8 364 aa11.8□□□□□ -0.52
CHD8-203ENST00000553283 METTL24Q5JXM2 366 aa11.8□□□□□ -0.52
CHD8-203ENST00000553283 OTOP1Q7RTM1 612 aa11.8□□□□□ -0.52
CHD8-203ENST00000553283 TBC1D22AQ8WUA7 517 aa11.8□□□□□ -0.52
CHD8-203ENST00000553283 MRIQ9BWK5 157 aa11.8□□□□□ -0.52
CHD8-203ENST00000553283 ELP3Q9H9T3 547 aa11.8□□□□□ -0.52
CHD8-203ENST00000553283 IQSEC3Q9UPP2 1182 aaPredicted RBP11.8□□□□□ -0.52
CHD8-203ENST00000553283 TRIM17Q9Y577 477 aa11.8□□□□□ -0.52
CHD8-203ENST00000553283 FRAT2O75474 233 aaPredicted RBP11.79□□□□□ -0.52
CHD8-203ENST00000553283 MAP3K9P80192 1104 aa11.79□□□□□ -0.52
CHD8-203ENST00000553283 CHAF1AQ13111 956 aaPredicted RBP11.79□□□□□ -0.52
CHD8-203ENST00000553283 CRHR2Q13324 411 aa11.79□□□□□ -0.52
CHD8-203ENST00000553283 PRPF38BQ5VTL8 546 aaKnown RBP11.79□□□□□ -0.52
CHD8-203ENST00000553283 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.79□□□□□ -0.52
CHD8-203ENST00000553283 CDAN1Q8IWY9 1227 aa11.79□□□□□ -0.52
CHD8-203ENST00000553283 VGLL2Q8N8G2 317 aa11.79□□□□□ -0.52
CHD8-203ENST00000553283 OPTNQ96CV9 577 aa11.79□□□□□ -0.52
CHD8-203ENST00000553283 ERO1AQ96HE7 468 aa11.79□□□□□ -0.52
CHD8-203ENST00000553283 MS4A4AQ96JQ5 239 aa11.79□□□□□ -0.52
CHD8-203ENST00000553283 TMEM39BQ9GZU3 492 aa11.79□□□□□ -0.52
CHD8-203ENST00000553283 USP44Q9H0E7 712 aa11.79□□□□□ -0.52
CHD8-203ENST00000553283 PTPRCP08575 1304 aa11.79□□□□□ -0.52
CHD8-203ENST00000553283 A0A1B0GUL6 1792 aa11.78□□□□□ -0.52
CHD8-203ENST00000553283 BCAMP50895 628 aa11.78□□□□□ -0.52
CHD8-203ENST00000553283 INTS3Q68E01 1043 aaKnown RBP11.78□□□□□ -0.52
CHD8-203ENST00000553283 SSH1Q8WYL5 1049 aa11.78□□□□□ -0.52
CHD8-203ENST00000553283 TEKT1Q969V4 418 aa11.78□□□□□ -0.52
CHD8-203ENST00000553283 E9PSI1 815 aa11.77□□□□□ -0.53
CHD8-203ENST00000553283 GTF2A2P52657 109 aa11.77□□□□□ -0.53
CHD8-203ENST00000553283 SP3Q02447 781 aa11.77□□□□□ -0.53
CHD8-203ENST00000553283 VGLL4Q14135 290 aa11.77□□□□□ -0.53
CHD8-203ENST00000553283 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.77□□□□□ -0.53
CHD8-203ENST00000553283 KLHDC4Q8TBB5 520 aa11.77□□□□□ -0.53
CHD8-203ENST00000553283 CD99L2Q8TCZ2 262 aa11.77□□□□□ -0.53
CHD8-203ENST00000553283 CNKSR2Q8WXI2 1034 aa11.77□□□□□ -0.53
CHD8-203ENST00000553283 BRI3BPQ8WY22 251 aa11.77□□□□□ -0.53
CHD8-203ENST00000553283 ZDHHC15Q96MV8 337 aa11.77□□□□□ -0.53
CHD8-203ENST00000553283 EFCC1Q9HA90 598 aa11.77□□□□□ -0.53
CHD8-203ENST00000553283 PTPN22Q9Y2R2 807 aa11.77□□□□□ -0.53
CHD8-203ENST00000553283 SUGT1Q9Y2Z0 365 aa11.77□□□□□ -0.53
CHD8-203ENST00000553283 CSADQ9Y600 493 aa11.77□□□□□ -0.53
CHD8-203ENST00000553283 IFIT1P09914 478 aaKnown RBP11.76□□□□□ -0.53
CHD8-203ENST00000553283 FGFR2P21802 821 aa11.76□□□□□ -0.53
CHD8-203ENST00000553283 CACNB3P54284 484 aa11.76□□□□□ -0.53
CHD8-203ENST00000553283 PUM3Q15397 648 aaKnown RBP11.76□□□□□ -0.53
CHD8-203ENST00000553283 FKBP1CQ5VVH2 108 aa11.76□□□□□ -0.53
CHD8-203ENST00000553283 APOBEC3HQ6NTF7 200 aaKnown RBP11.76□□□□□ -0.53
CHD8-203ENST00000553283 FAM83AQ86UY5 434 aa11.76□□□□□ -0.53
CHD8-203ENST00000553283 KIF16BQ96L93 1317 aa11.76□□□□□ -0.53
CHD8-203ENST00000553283 ECM29Q5VYK3 1845 aa11.76□□□□□ -0.53
CHD8-203ENST00000553283 CCL15-CCL14A0A0B4J2E2 113 aa11.75□□□□□ -0.53
CHD8-203ENST00000553283 SPDYE5A6NIY4 337 aa11.75□□□□□ -0.53
CHD8-203ENST00000553283 EYA2O00167 538 aa11.75□□□□□ -0.53
CHD8-203ENST00000553283 RFX5P48382 616 aaPredicted RBP11.75□□□□□ -0.53
CHD8-203ENST00000553283 SLFN5Q08AF3 891 aa11.75□□□□□ -0.53
CHD8-203ENST00000553283 CCL15Q16663 113 aa11.75□□□□□ -0.53
CHD8-203ENST00000553283 HHIPL2Q6UWX4 724 aa11.75□□□□□ -0.53
CHD8-203ENST00000553283 ARMC5Q96C12 935 aa11.75□□□□□ -0.53
CHD8-203ENST00000553283 HOOK2Q96ED9 719 aa11.75□□□□□ -0.53
CHD8-203ENST00000553283 OTUD5Q96G74 571 aa11.75□□□□□ -0.53
CHD8-203ENST00000553283 ZFYVE28Q9HCC9 887 aa11.75□□□□□ -0.53
CHD8-203ENST00000553283 TMOD2Q9NZR1 351 aa11.75□□□□□ -0.53
CHD8-203ENST00000553283 MAST3O60307 1309 aa11.75□□□□□ -0.53
CHD8-203ENST00000553283 CAP1Q01518 475 aa11.74□□□□□ -0.53
CHD8-203ENST00000553283 ARHGEF6Q15052 776 aa11.74□□□□□ -0.53
CHD8-203ENST00000553283 TAF1CQ15572 869 aaPredicted RBP11.74□□□□□ -0.53
CHD8-203ENST00000553283 ALDH1L2Q3SY69 923 aa11.74□□□□□ -0.53
CHD8-203ENST00000553283 ERO1BQ86YB8 467 aa11.74□□□□□ -0.53
CHD8-203ENST00000553283 FAM43AQ8N2R8 423 aa11.74□□□□□ -0.53
CHD8-203ENST00000553283 WDR66Q8TBY9 1149 aa11.74□□□□□ -0.53
CHD8-203ENST00000553283 LPIN2Q92539 896 aa11.74□□□□□ -0.53
CHD8-203ENST00000553283 PCDH10Q9P2E7 1040 aa11.74□□□□□ -0.53
CHD8-203ENST00000553283 SNCAIPQ9Y6H5 919 aa11.74□□□□□ -0.53
CHD8-203ENST00000553283 POTEFA5A3E0 1075 aa11.73□□□□□ -0.53
CHD8-203ENST00000553283 CETPP11597 493 aa11.73□□□□□ -0.53
CHD8-203ENST00000553283 SLC5A1P13866 664 aa11.73□□□□□ -0.53
CHD8-203ENST00000553283 ATG9AQ7Z3C6 839 aa11.73□□□□□ -0.53
CHD8-203ENST00000553283 ZKSCAN4Q969J2 545 aaPredicted RBP11.73□□□□□ -0.53
CHD8-203ENST00000553283 WRNIP1Q96S55 665 aa11.73□□□□□ -0.53
CHD8-203ENST00000553283 KIAA0100Q14667 2235 aaKnown RBP11.72□□□□□ -0.53
CHD8-203ENST00000553283 IRF6O14896 467 aa11.72□□□□□ -0.53
CHD8-203ENST00000553283 WDHD1O75717 1129 aaPredicted RBP11.72□□□□□ -0.53
CHD8-203ENST00000553283 SNAPC2Q13487 334 aa11.72□□□□□ -0.53
CHD8-203ENST00000553283 DCAF15Q66K64 600 aa11.72□□□□□ -0.53
CHD8-203ENST00000553283 FAM151AQ8WW52 585 aa11.72□□□□□ -0.53
CHD8-203ENST00000553283 CDCA7LQ96GN5 454 aa11.72□□□□□ -0.53
CHD8-203ENST00000553283 ZCCHC17Q9NP64 241 aaKnown RBP11.72□□□□□ -0.53
CHD8-203ENST00000553283 FBXO3Q9UK99 471 aa11.72□□□□□ -0.53
CHD8-203ENST00000553283 BTBD19C9JJ37 291 aa11.71□□□□□ -0.53
CHD8-203ENST00000553283 TLR2O60603 784 aa11.71□□□□□ -0.53
CHD8-203ENST00000553283 CIAO1O76071 339 aa11.71□□□□□ -0.53
CHD8-203ENST00000553283 PPATQ06203 517 aa11.71□□□□□ -0.53
CHD8-203ENST00000553283 PPIL2Q13356 520 aa11.71□□□□□ -0.53
CHD8-203ENST00000553283 MIGA2Q7L4E1 593 aa11.71□□□□□ -0.53
CHD8-203ENST00000553283 TRMT2AQ8IZ69 625 aaKnown RBP11.71□□□□□ -0.53
CHD8-203ENST00000553283 ZNF341Q9BYN7 854 aa11.71□□□□□ -0.53
CHD8-203ENST00000553283 SMC4Q9NTJ3 1288 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms