RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 SH3D19Q5HYK7 790 aa6.79□□□□□ -1.32
CKAP4-203ENST00000553039 ZNF697Q5TEC3 545 aa6.79□□□□□ -1.32
CKAP4-203ENST00000553039 STRIP1Q5VSL9 837 aa6.79□□□□□ -1.32
CKAP4-203ENST00000553039 MAFAQ8NHW3 353 aaPredicted RBP6.79□□□□□ -1.32
CKAP4-203ENST00000553039 FXR2P51116 673 aaKnown RBP eCLIP6.78□□□□□ -1.32
CKAP4-203ENST00000553039 MAP3K9P80192 1104 aa6.78□□□□□ -1.32
CKAP4-203ENST00000553039 TJAP1Q5JTD0 557 aa6.78□□□□□ -1.32
CKAP4-203ENST00000553039 TTLL5Q6EMB2 1281 aa6.78□□□□□ -1.32
CKAP4-203ENST00000553039 MCM10Q7L590 875 aa6.78□□□□□ -1.32
CKAP4-203ENST00000553039 SLAIN1Q8ND83 568 aa6.78□□□□□ -1.32
CKAP4-203ENST00000553039 OPTNQ96CV9 577 aa6.78□□□□□ -1.32
CKAP4-203ENST00000553039 PAWRQ96IZ0 340 aaKnown RBP6.78□□□□□ -1.32
CKAP4-203ENST00000553039 PHACTR3Q96KR7 559 aa6.78□□□□□ -1.32
CKAP4-203ENST00000553039 MIS18AQ9NYP9 233 aa6.78□□□□□ -1.32
CKAP4-203ENST00000553039 SERPINA10Q9UK55 444 aa6.78□□□□□ -1.32
CKAP4-203ENST00000553039 NUDCQ9Y266 331 aa6.78□□□□□ -1.32
CKAP4-203ENST00000553039 TTC28Q96AY4 2481 aa6.78□□□□□ -1.32
CKAP4-203ENST00000553039 FAM205AQ6ZU69 1335 aa6.77□□□□□ -1.32
CKAP4-203ENST00000553039 RBBP6Q7Z6E9 1792 aaKnown RBP6.77□□□□□ -1.33
CKAP4-203ENST00000553039 MS4A1P11836 297 aa6.77□□□□□ -1.33
CKAP4-203ENST00000553039 MAGEA10P43363 369 aaPredicted RBP6.77□□□□□ -1.33
CKAP4-203ENST00000553039 C7orf61Q8IZ16 206 aa6.77□□□□□ -1.33
CKAP4-203ENST00000553039 ANKLE1Q8NAG6 615 aa6.77□□□□□ -1.33
CKAP4-203ENST00000553039 MTMR14Q8NCE2 650 aa6.77□□□□□ -1.33
CKAP4-203ENST00000553039 BRI3BPQ8WY22 251 aa6.77□□□□□ -1.33
CKAP4-203ENST00000553039 FBXW7Q969H0 707 aa6.77□□□□□ -1.33
CKAP4-203ENST00000553039 GUCD1Q96NT3 240 aa6.77□□□□□ -1.33
CKAP4-203ENST00000553039 DEFB118Q96PH6 123 aa6.77□□□□□ -1.33
CKAP4-203ENST00000553039 CDX2Q99626 313 aaPredicted RBP6.77□□□□□ -1.33
CKAP4-203ENST00000553039 C1QTNF1Q9BXJ1 281 aa6.77□□□□□ -1.33
CKAP4-203ENST00000553039 ARHGAP39Q9C0H5 1083 aa6.77□□□□□ -1.33
CKAP4-203ENST00000553039 COA1Q9GZY4 146 aa6.77□□□□□ -1.33
CKAP4-203ENST00000553039 NBPF3Q9H094 633 aa6.77□□□□□ -1.33
CKAP4-203ENST00000553039 ELP3Q9H9T3 547 aa6.77□□□□□ -1.33
CKAP4-203ENST00000553039 ZMYND8Q9ULU4 1186 aaPredicted RBP6.77□□□□□ -1.33
CKAP4-203ENST00000553039 CSADQ9Y600 493 aa6.77□□□□□ -1.33
CKAP4-203ENST00000553039 COL6A3P12111 3177 aa6.77□□□□□ -1.33
CKAP4-203ENST00000553039 MYPNQ86TC9 1320 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 SASH1O94885 1247 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 NEFMP07197 916 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 PRKAR2BP31323 418 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 GJA5P36382 358 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 FCGRTP55899 365 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 EIF4A1P60842 406 aaKnown RBP6.76□□□□□ -1.33
CKAP4-203ENST00000553039 SNAPC2Q13487 334 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 TNFAIP1Q13829 316 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 DACT2Q5SW24 774 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 NBPF12Q5TAG4 269 aaPredicted RBP6.76□□□□□ -1.33
CKAP4-203ENST00000553039 C17orf99Q6UX52 265 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 COPS6Q7L5N1 327 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 FAM43AQ8N2R8 423 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 OXER1Q8TDS5 423 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 PXYLP1Q8TE99 480 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 FAM161BQ96MY7 647 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 TMUB1Q9BVT8 246 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 UNC93B1Q9H1C4 597 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 SEMA6BQ9H3T3 888 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 RAPGEFL1Q9UHV5 662 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 FZD1Q9UP38 647 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 XDHP47989 1333 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 SYNGAP1Q96PV0 1343 aa6.76□□□□□ -1.33
CKAP4-203ENST00000553039 RANBP2P49792 3224 aaKnown RBP6.75□□□□□ -1.33
CKAP4-203ENST00000553039 UBR2Q8IWV8 1755 aa6.75□□□□□ -1.33
CKAP4-203ENST00000553039 GRXCR2A6NFK2 248 aa6.75□□□□□ -1.33
CKAP4-203ENST00000553039 ADCY3O60266 1144 aa6.75□□□□□ -1.33
CKAP4-203ENST00000553039 EIF2S2P20042 333 aaKnown RBP6.75□□□□□ -1.33
CKAP4-203ENST00000553039 FECHP22830 423 aa6.75□□□□□ -1.33
CKAP4-203ENST00000553039 AIMP1Q12904 312 aaKnown RBP6.75□□□□□ -1.33
CKAP4-203ENST00000553039 KIAA0825Q8IV33 1275 aa6.75□□□□□ -1.33
CKAP4-203ENST00000553039 FAM89AQ96GI7 184 aa6.75□□□□□ -1.33
CKAP4-203ENST00000553039 ZBED3Q96IU2 234 aaPredicted RBP6.75□□□□□ -1.33
CKAP4-203ENST00000553039 CFAP53Q96M91 514 aa6.75□□□□□ -1.33
CKAP4-203ENST00000553039 LBHD1Q9BQE6 289 aaPredicted RBP6.75□□□□□ -1.33
CKAP4-203ENST00000553039 IRS4O14654 1257 aaPredicted RBP6.74□□□□□ -1.33
CKAP4-203ENST00000553039 SYN1P17600 705 aa6.74□□□□□ -1.33
CKAP4-203ENST00000553039 DCTN1Q14203 1278 aa6.74□□□□□ -1.33
CKAP4-203ENST00000553039 RASA3Q14644 834 aa6.74□□□□□ -1.33
CKAP4-203ENST00000553039 SKIV2LQ15477 1246 aaKnown RBP6.74□□□□□ -1.33
CKAP4-203ENST00000553039 CCDC152Q4G0S7 254 aa6.74□□□□□ -1.33
CKAP4-203ENST00000553039 ERO1BQ86YB8 467 aa6.74□□□□□ -1.33
CKAP4-203ENST00000553039 ANKRD18AQ8IVF6 992 aa6.74□□□□□ -1.33
CKAP4-203ENST00000553039 TMC2Q8TDI7 906 aa6.74□□□□□ -1.33
CKAP4-203ENST00000553039 SNX27Q96L92 541 aa6.74□□□□□ -1.33
CKAP4-203ENST00000553039 THUMPD2Q9BTF0 503 aaKnown RBP6.74□□□□□ -1.33
CKAP4-203ENST00000553039 VEZTQ9HBM0 779 aa6.74□□□□□ -1.33
CKAP4-203ENST00000553039 CPA4Q9UI42 421 aa6.74□□□□□ -1.33
CKAP4-203ENST00000553039 HCN4Q9Y3Q4 1203 aa6.74□□□□□ -1.33
CKAP4-203ENST00000553039 ZNF804BA4D1E1 1349 aa6.74□□□□□ -1.33
CKAP4-203ENST00000553039 BTBD19C9JJ37 291 aa6.73□□□□□ -1.33
CKAP4-203ENST00000553039 FOSL2P15408 326 aa6.73□□□□□ -1.33
CKAP4-203ENST00000553039 TNNI2P48788 182 aa6.73□□□□□ -1.33
CKAP4-203ENST00000553039 RBM5P52756 815 aaKnown RBP eCLIP6.73□□□□□ -1.33
CKAP4-203ENST00000553039 PTGDRQ13258 359 aa6.73□□□□□ -1.33
CKAP4-203ENST00000553039 TRIM28Q13263 835 aaKnown RBP6.73□□□□□ -1.33
CKAP4-203ENST00000553039 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.73□□□□□ -1.33
CKAP4-203ENST00000553039 PLPP6Q8IY26 295 aa6.73□□□□□ -1.33
CKAP4-203ENST00000553039 XAGE3Q8WTP9 111 aa6.73□□□□□ -1.33
CKAP4-203ENST00000553039 ATXN2LQ8WWM7 1075 aaKnown RBP6.73□□□□□ -1.33
CKAP4-203ENST00000553039 HOOK2Q96ED9 719 aa6.73□□□□□ -1.33
CKAP4-203ENST00000553039 MXD3Q9BW11 206 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms