RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.43□□□□□ -0.58
PRKCH-203ENST00000552875 SEC31BQ9NQW1 1179 aa11.43□□□□□ -0.58
PRKCH-203ENST00000552875 COL2A1P02458 1487 aaPredicted RBP11.43□□□□□ -0.58
PRKCH-203ENST00000552875 PRUNE2Q8WUY3 3088 aa11.42□□□□□ -0.58
PRKCH-203ENST00000552875 PDHXO00330 501 aa11.42□□□□□ -0.58
PRKCH-203ENST00000552875 TNNI2P48788 182 aa11.42□□□□□ -0.58
PRKCH-203ENST00000552875 FLT3LGP49771 235 aa11.42□□□□□ -0.58
PRKCH-203ENST00000552875 RBM5P52756 815 aaKnown RBP eCLIP11.42□□□□□ -0.58
PRKCH-203ENST00000552875 GTF2IP78347 998 aa11.42□□□□□ -0.58
PRKCH-203ENST00000552875 CFAP100Q494V2 611 aa11.42□□□□□ -0.58
PRKCH-203ENST00000552875 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.42□□□□□ -0.58
PRKCH-203ENST00000552875 ADAMTS19Q8TE59 1207 aa11.42□□□□□ -0.58
PRKCH-203ENST00000552875 TNPO2O14787 897 aaKnown RBP11.41□□□□□ -0.58
PRKCH-203ENST00000552875 IRF6O14896 467 aa11.41□□□□□ -0.58
PRKCH-203ENST00000552875 PPIL2Q13356 520 aa11.41□□□□□ -0.58
PRKCH-203ENST00000552875 ALYREFQ86V81 257 aaKnown RBP11.41□□□□□ -0.58
PRKCH-203ENST00000552875 ZNF428Q96B54 188 aa11.41□□□□□ -0.58
PRKCH-203ENST00000552875 HOOK2Q96ED9 719 aa11.41□□□□□ -0.58
PRKCH-203ENST00000552875 CDC5LQ99459 802 aaKnown RBP11.41□□□□□ -0.58
PRKCH-203ENST00000552875 PRKAG2Q9UGJ0 569 aa11.41□□□□□ -0.58
PRKCH-203ENST00000552875 TAOK2Q9UL54 1235 aa11.41□□□□□ -0.58
PRKCH-203ENST00000552875 GABRQQ9UN88 632 aa11.41□□□□□ -0.58
PRKCH-203ENST00000552875 ANXA1P04083 346 aa11.4□□□□□ -0.58
PRKCH-203ENST00000552875 U2AF1L5P0DN76 240 aaPredicted RBP11.4□□□□□ -0.58
PRKCH-203ENST00000552875 CCT4P50991 539 aaKnown RBP11.4□□□□□ -0.58
PRKCH-203ENST00000552875 SMAD3P84022 425 aaKnown RBP11.4□□□□□ -0.58
PRKCH-203ENST00000552875 U2AF1Q01081 240 aaKnown RBP eCLIP11.4□□□□□ -0.58
PRKCH-203ENST00000552875 PROSER3Q2NL68 480 aa11.4□□□□□ -0.58
PRKCH-203ENST00000552875 PLBD2Q8NHP8 589 aa11.4□□□□□ -0.58
PRKCH-203ENST00000552875 COA7Q96BR5 231 aa11.4□□□□□ -0.58
PRKCH-203ENST00000552875 ASB2Q96Q27 587 aa11.4□□□□□ -0.58
PRKCH-203ENST00000552875 P2RX7Q99572 595 aaKnown RBP11.4□□□□□ -0.58
PRKCH-203ENST00000552875 HMX1Q9NP08 348 aaPredicted RBP11.4□□□□□ -0.58
PRKCH-203ENST00000552875 LEMD3Q9Y2U8 911 aa11.4□□□□□ -0.58
PRKCH-203ENST00000552875 ZSWIM8A7E2V4 1837 aa11.39□□□□□ -0.59
PRKCH-203ENST00000552875 COL3A1P02461 1466 aaPredicted RBP11.39□□□□□ -0.59
PRKCH-203ENST00000552875 MRPS5P82675 430 aaKnown RBP11.39□□□□□ -0.59
PRKCH-203ENST00000552875 PPATQ06203 517 aa11.39□□□□□ -0.59
PRKCH-203ENST00000552875 CC2D1BQ5T0F9 858 aaKnown RBP11.39□□□□□ -0.59
PRKCH-203ENST00000552875 ZBTB38Q8NAP3 1195 aaPredicted RBP11.39□□□□□ -0.59
PRKCH-203ENST00000552875 PRMT6Q96LA8 375 aaPredicted RBP11.39□□□□□ -0.59
PRKCH-203ENST00000552875 ISCA1Q9BUE6 129 aa11.39□□□□□ -0.59
PRKCH-203ENST00000552875 THEGQ9P2T0 379 aa11.39□□□□□ -0.59
PRKCH-203ENST00000552875 F8W031 263 aaPredicted RBP11.38□□□□□ -0.59
PRKCH-203ENST00000552875 ATP5J2-PTCD1G3V325 749 aa11.38□□□□□ -0.59
PRKCH-203ENST00000552875 WRNIP1Q96S55 665 aa11.38□□□□□ -0.59
PRKCH-203ENST00000552875 BSDC1Q9NW68 430 aaPredicted RBP11.38□□□□□ -0.59
PRKCH-203ENST00000552875 KCNH4Q9UQ05 1017 aa11.38□□□□□ -0.59
PRKCH-203ENST00000552875 PDE8AO60658 829 aa11.37□□□□□ -0.59
PRKCH-203ENST00000552875 HMGCRP04035 888 aa11.37□□□□□ -0.59
PRKCH-203ENST00000552875 BCRP11274 1271 aa11.37□□□□□ -0.59
PRKCH-203ENST00000552875 TRIM28Q13263 835 aaKnown RBP11.37□□□□□ -0.59
PRKCH-203ENST00000552875 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.37□□□□□ -0.59
PRKCH-203ENST00000552875 TTYH1Q9H313 450 aaPredicted RBP11.37□□□□□ -0.59
PRKCH-203ENST00000552875 TSPYL4Q9UJ04 414 aa11.37□□□□□ -0.59
PRKCH-203ENST00000552875 OGDHLQ9ULD0 1010 aa11.37□□□□□ -0.59
PRKCH-203ENST00000552875 MINPP1Q9UNW1 487 aa11.37□□□□□ -0.59
PRKCH-203ENST00000552875 SNCAIPQ9Y6H5 919 aa11.37□□□□□ -0.59
PRKCH-203ENST00000552875 KCNJ4P48050 445 aa11.36□□□□□ -0.59
PRKCH-203ENST00000552875 FKBP1AP62942 108 aaKnown RBP11.36□□□□□ -0.59
PRKCH-203ENST00000552875 SPDYE2Q495Y8 402 aa11.36□□□□□ -0.59
PRKCH-203ENST00000552875 TEPSINQ96N21 525 aa11.36□□□□□ -0.59
PRKCH-203ENST00000552875 RNF216Q9NWF9 866 aaPredicted RBP11.36□□□□□ -0.59
PRKCH-203ENST00000552875 COL4A1P02462 1669 aa11.36□□□□□ -0.59
PRKCH-203ENST00000552875 PIEZO1Q92508 2521 aa11.35□□□□□ -0.59
PRKCH-203ENST00000552875 LAMA2P24043 3122 aaKnown RBP11.35□□□□□ -0.59
PRKCH-203ENST00000552875 TMEM31Q5JXX7 168 aa11.35□□□□□ -0.59
PRKCH-203ENST00000552875 DCAF15Q66K64 600 aa11.35□□□□□ -0.59
PRKCH-203ENST00000552875 CCER1Q8TC90 406 aaPredicted RBP11.35□□□□□ -0.59
PRKCH-203ENST00000552875 ZKSCAN4Q969J2 545 aaPredicted RBP11.35□□□□□ -0.59
PRKCH-203ENST00000552875 CCDC85AQ96PX6 553 aaPredicted RBP11.35□□□□□ -0.59
PRKCH-203ENST00000552875 LRFN3Q9BTN0 628 aa11.35□□□□□ -0.59
PRKCH-203ENST00000552875 ANKRD2Q9GZV1 360 aa11.35□□□□□ -0.59
PRKCH-203ENST00000552875 ZNF70Q9UC06 446 aaPredicted RBP11.35□□□□□ -0.59
PRKCH-203ENST00000552875 PCDHAC2Q9Y5I4 1007 aa11.35□□□□□ -0.59
PRKCH-203ENST00000552875 PFASO15067 1338 aa11.35□□□□□ -0.59
PRKCH-203ENST00000552875 TCP10L2B9ZVM9 353 aa11.34□□□□□ -0.59
PRKCH-203ENST00000552875 TXNRD3Q86VQ6 643 aa11.34□□□□□ -0.59
PRKCH-203ENST00000552875 USP38Q8NB14 1042 aa11.34□□□□□ -0.59
PRKCH-203ENST00000552875 SMCR8Q8TEV9 937 aaPredicted RBP11.34□□□□□ -0.59
PRKCH-203ENST00000552875 GAS2L1Q99501 681 aaPredicted RBP11.34□□□□□ -0.59
PRKCH-203ENST00000552875 TMEM39BQ9GZU3 492 aa11.34□□□□□ -0.59
PRKCH-203ENST00000552875 TSPYL2Q9H2G4 693 aaPredicted RBP11.34□□□□□ -0.59
PRKCH-203ENST00000552875 CD209Q9NNX6 404 aa11.34□□□□□ -0.59
PRKCH-203ENST00000552875 ALPK3Q96L96 1907 aa11.34□□□□□ -0.59
PRKCH-203ENST00000552875 CYP2C8P10632 490 aa11.33□□□□□ -0.6
PRKCH-203ENST00000552875 SHHQ15465 462 aa11.33□□□□□ -0.6
PRKCH-203ENST00000552875 LRRC26Q2I0M4 334 aa11.33□□□□□ -0.6
PRKCH-203ENST00000552875 CERS5Q8N5B7 392 aa11.33□□□□□ -0.6
PRKCH-203ENST00000552875 SERPINA10Q9UK55 444 aa11.33□□□□□ -0.6
PRKCH-203ENST00000552875 OTOFQ9HC10 1997 aa11.33□□□□□ -0.6
PRKCH-203ENST00000552875 COL6A1P12109 1028 aa11.32□□□□□ -0.6
PRKCH-203ENST00000552875 IGHMBP2P38935 993 aaKnown RBP11.32□□□□□ -0.6
PRKCH-203ENST00000552875 MRE11P49959 708 aa11.32□□□□□ -0.6
PRKCH-203ENST00000552875 FASTKD5Q7L8L6 764 aaKnown RBP11.32□□□□□ -0.6
PRKCH-203ENST00000552875 RIC3Q7Z5B4 369 aa11.32□□□□□ -0.6
PRKCH-203ENST00000552875 PPM1EQ8WY54 764 aa11.32□□□□□ -0.6
PRKCH-203ENST00000552875 TDRD3Q9H7E2 651 aaKnown RBP11.32□□□□□ -0.6
PRKCH-203ENST00000552875 BABAM1Q9NWV8 329 aa11.32□□□□□ -0.6
PRKCH-203ENST00000552875 CDH23Q9H251 3354 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms