RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 NOM1Q5C9Z4 860 aaKnown RBP7.66□□□□□ -1.18
USP44-207ENST00000552237 HP1BP3Q5SSJ5 553 aaPredicted RBP7.66□□□□□ -1.18
USP44-207ENST00000552237 ZNF765Q7L2R6 523 aa7.66□□□□□ -1.18
USP44-207ENST00000552237 GGNBP2Q9H3C7 697 aa7.66□□□□□ -1.18
USP44-207ENST00000552237 SEPT3Q9UH03 358 aa7.66□□□□□ -1.18
USP44-207ENST00000552237 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.65□□□□□ -1.18
USP44-207ENST00000552237 EREGO14944 169 aa7.65□□□□□ -1.18
USP44-207ENST00000552237 PAPLNO95428 1278 aa7.65□□□□□ -1.18
USP44-207ENST00000552237 ACTL7BQ9Y614 415 aa7.65□□□□□ -1.18
USP44-207ENST00000552237 ATP2B4P23634 1241 aa7.64□□□□□ -1.19
USP44-207ENST00000552237 MZF1P28698 734 aaPredicted RBP7.64□□□□□ -1.19
USP44-207ENST00000552237 ZNF124Q15973 351 aa7.64□□□□□ -1.19
USP44-207ENST00000552237 DYMQ7RTS9 669 aa7.64□□□□□ -1.19
USP44-207ENST00000552237 STK11IPQ8N1F8 1099 aa7.64□□□□□ -1.19
USP44-207ENST00000552237 HELQQ8TDG4 1101 aa7.64□□□□□ -1.19
USP44-207ENST00000552237 BHLHE41Q9C0J9 482 aaPredicted RBP7.64□□□□□ -1.19
USP44-207ENST00000552237 RAD18Q9NS91 495 aa7.64□□□□□ -1.19
USP44-207ENST00000552237 AP4E1Q9UPM8 1137 aa7.64□□□□□ -1.19
USP44-207ENST00000552237 ATG7O95352 703 aa7.63□□□□□ -1.19
USP44-207ENST00000552237 AAMPQ13685 434 aa7.63□□□□□ -1.19
USP44-207ENST00000552237 ZNF792Q3KQV3 632 aa7.63□□□□□ -1.19
USP44-207ENST00000552237 AKAP4Q5JQC9 854 aa7.63□□□□□ -1.19
USP44-207ENST00000552237 SNX29Q8TEQ0 813 aa7.63□□□□□ -1.19
USP44-207ENST00000552237 BCL7CQ8WUZ0 217 aaPredicted RBP7.63□□□□□ -1.19
USP44-207ENST00000552237 GATA6Q92908 595 aa7.63□□□□□ -1.19
USP44-207ENST00000552237 SEMA6CQ9H3T2 930 aa7.63□□□□□ -1.19
USP44-207ENST00000552237 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.62□□□□□ -1.19
USP44-207ENST00000552237 DBX1A6NMT0 343 aa7.62□□□□□ -1.19
USP44-207ENST00000552237 FARP2O94887 1054 aaPredicted RBP7.62□□□□□ -1.19
USP44-207ENST00000552237 ZNF574Q6ZN55 896 aaPredicted RBP7.62□□□□□ -1.19
USP44-207ENST00000552237 ZFYVE1Q9HBF4 777 aa7.62□□□□□ -1.19
USP44-207ENST00000552237 TNFRSF21O75509 655 aa7.61□□□□□ -1.19
USP44-207ENST00000552237 CYP11A1P05108 521 aa7.61□□□□□ -1.19
USP44-207ENST00000552237 MAOBP27338 520 aa7.61□□□□□ -1.19
USP44-207ENST00000552237 EIF1AXP47813 144 aaKnown RBP7.61□□□□□ -1.19
USP44-207ENST00000552237 KSR1Q8IVT5 923 aa7.61□□□□□ -1.19
USP44-207ENST00000552237 DAGLAQ9Y4D2 1042 aa7.61□□□□□ -1.19
USP44-207ENST00000552237 MPSTP25325 297 aa7.6□□□□□ -1.19
USP44-207ENST00000552237 ALKBH2Q6NS38 261 aa7.6□□□□□ -1.19
USP44-207ENST00000552237 LATS2Q9NRM7 1088 aa7.6□□□□□ -1.19
USP44-207ENST00000552237 FAM105AQ9NUU6 356 aa7.6□□□□□ -1.19
USP44-207ENST00000552237 POLIQ9UNA4 740 aa7.6□□□□□ -1.19
USP44-207ENST00000552237 AMOTL2Q9Y2J4 779 aa7.6□□□□□ -1.19
USP44-207ENST00000552237 METTL12A8MUP2 240 aa7.59□□□□□ -1.19
USP44-207ENST00000552237 ASPAP45381 313 aa7.59□□□□□ -1.19
USP44-207ENST00000552237 PCDH1Q08174 1060 aa7.59□□□□□ -1.19
USP44-207ENST00000552237 EHHADHQ08426 723 aa7.59□□□□□ -1.19
USP44-207ENST00000552237 POU4F3Q15319 338 aa7.59□□□□□ -1.19
USP44-207ENST00000552237 FAM168AQ92567 244 aa7.59□□□□□ -1.19
USP44-207ENST00000552237 MISP3Q96FF7 219 aa7.59□□□□□ -1.19
USP44-207ENST00000552237 SLC38A3Q99624 504 aa7.59□□□□□ -1.19
USP44-207ENST00000552237 CORO1BQ9BR76 489 aa7.59□□□□□ -1.19
USP44-207ENST00000552237 ACSS3Q9H6R3 686 aa7.59□□□□□ -1.19
USP44-207ENST00000552237 RC3H2Q9HBD1 1191 aaKnown RBP7.59□□□□□ -1.19
USP44-207ENST00000552237 LGR6Q9HBX8 967 aa7.59□□□□□ -1.19
USP44-207ENST00000552237 FOXD3Q9UJU5 478 aaPredicted RBP7.59□□□□□ -1.19
USP44-207ENST00000552237 CYP27C1Q4G0S4 372 aa7.58□□□□□ -1.2
USP44-207ENST00000552237 FBLN7Q53RD9 439 aa7.58□□□□□ -1.2
USP44-207ENST00000552237 DDX54Q8TDD1 881 aaKnown RBP7.58□□□□□ -1.2
USP44-207ENST00000552237 NRSN2Q9GZP1 204 aa7.58□□□□□ -1.2
USP44-207ENST00000552237 CLEC4MQ9H2X3 399 aaPredicted RBP7.58□□□□□ -1.2
USP44-207ENST00000552237 OGFOD3Q6PK18 319 aa7.57□□□□□ -1.2
USP44-207ENST00000552237 ATG4DQ86TL0 474 aaPredicted RBP7.57□□□□□ -1.2
USP44-207ENST00000552237 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.57□□□□□ -1.2
USP44-207ENST00000552237 CARMIL2Q6F5E8 1435 aa7.56□□□□□ -1.2
USP44-207ENST00000552237 A0A096LPE4 126 aa7.56□□□□□ -1.2
USP44-207ENST00000552237 A0A1W2PPZ6 126 aa7.56□□□□□ -1.2
USP44-207ENST00000552237 USP5P45974 858 aa7.56□□□□□ -1.2
USP44-207ENST00000552237 PEAR1Q5VY43 1037 aaPredicted RBP7.56□□□□□ -1.2
USP44-207ENST00000552237 SPRED2Q7Z698 418 aa7.56□□□□□ -1.2
USP44-207ENST00000552237 CTSBP07858 339 aa7.55□□□□□ -1.2
USP44-207ENST00000552237 BNIP3Q12983 259 aa7.55□□□□□ -1.2
USP44-207ENST00000552237 PDE3AQ14432 1141 aa7.55□□□□□ -1.2
USP44-207ENST00000552237 LCE4AQ5TA78 99 aa7.55□□□□□ -1.2
USP44-207ENST00000552237 C1GALT1Q9NS00 363 aa7.55□□□□□ -1.2
USP44-207ENST00000552237 SLAIN2Q9P270 581 aa7.55□□□□□ -1.2
USP44-207ENST00000552237 SRPK2P78362 688 aaKnown RBP7.54□□□□□ -1.2
USP44-207ENST00000552237 SPOCD1Q6ZMY3 1216 aa7.54□□□□□ -1.2
USP44-207ENST00000552237 ARHGAP27Q6ZUM4 889 aa7.54□□□□□ -1.2
USP44-207ENST00000552237 GTF3C2Q8WUA4 911 aaPredicted RBP7.54□□□□□ -1.2
USP44-207ENST00000552237 TMEM40Q8WWA1 233 aa7.54□□□□□ -1.2
USP44-207ENST00000552237 DYNC1LI2O43237 492 aaPredicted RBP7.53□□□□□ -1.2
USP44-207ENST00000552237 POLR3DP05423 398 aaPredicted RBP7.53□□□□□ -1.2
USP44-207ENST00000552237 FUT4P22083 530 aa7.53□□□□□ -1.2
USP44-207ENST00000552237 ZNF423Q2M1K9 1284 aa7.53□□□□□ -1.2
USP44-207ENST00000552237 PLD6Q8N2A8 252 aaKnown RBP7.53□□□□□ -1.2
USP44-207ENST00000552237 PI4K2BQ8TCG2 481 aa7.53□□□□□ -1.2
USP44-207ENST00000552237 NETO1Q8TDF5 533 aa7.53□□□□□ -1.2
USP44-207ENST00000552237 LIN7BQ9HAP6 207 aa7.53□□□□□ -1.2
USP44-207ENST00000552237 RNASE1P07998 156 aaKnown RBP7.52□□□□□ -1.21
USP44-207ENST00000552237 FAM87AP0C7U9 286 aa7.52□□□□□ -1.21
USP44-207ENST00000552237 CD8BP10966 210 aa7.52□□□□□ -1.21
USP44-207ENST00000552237 SEZ6L2Q6UXD5 910 aa7.52□□□□□ -1.21
USP44-207ENST00000552237 FAM181AQ8N9Y4 354 aa7.52□□□□□ -1.21
USP44-207ENST00000552237 GLIS3Q8NEA6 775 aa7.52□□□□□ -1.21
USP44-207ENST00000552237 PBXIP1Q96AQ6 731 aa7.52□□□□□ -1.21
USP44-207ENST00000552237 KRTAP4-2Q9BYR5 136 aa7.52□□□□□ -1.21
USP44-207ENST00000552237 PIDD1Q9HB75 910 aa7.52□□□□□ -1.21
USP44-207ENST00000552237 ZFYVE28Q9HCC9 887 aa7.52□□□□□ -1.21
USP44-207ENST00000552237 AOC2O75106 756 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms