RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 B3GALT4O96024 378 aa5.88□□□□□ -1.47
LSM6P2-201ENST00000552208 EIF6P56537 245 aaKnown RBP5.88□□□□□ -1.47
LSM6P2-201ENST00000552208 ZNF423Q2M1K9 1284 aa5.88□□□□□ -1.47
LSM6P2-201ENST00000552208 ADAMTSL4Q6UY14 1074 aa5.88□□□□□ -1.47
LSM6P2-201ENST00000552208 REC114Q7Z4M0 266 aa5.88□□□□□ -1.47
LSM6P2-201ENST00000552208 VN1R5Q7Z5H4 357 aa5.88□□□□□ -1.47
LSM6P2-201ENST00000552208 BSNDQ8WZ55 320 aa5.88□□□□□ -1.47
LSM6P2-201ENST00000552208 GMCL1Q96IK5 515 aa5.88□□□□□ -1.47
LSM6P2-201ENST00000552208 CLEC4MQ9H2X3 399 aaPredicted RBP5.88□□□□□ -1.47
LSM6P2-201ENST00000552208 KANSL2Q9H9L4 492 aa5.88□□□□□ -1.47
LSM6P2-201ENST00000552208 ATP13A2Q9NQ11 1180 aa5.88□□□□□ -1.47
LSM6P2-201ENST00000552208 ATXN7L1Q9ULK2 861 aaPredicted RBP5.88□□□□□ -1.47
LSM6P2-201ENST00000552208 ZNRF3Q9ULT6 936 aa5.88□□□□□ -1.47
LSM6P2-201ENST00000552208 CYP8B1Q9UNU6 501 aa5.88□□□□□ -1.47
LSM6P2-201ENST00000552208 MAN1A2O60476 641 aa5.87□□□□□ -1.47
LSM6P2-201ENST00000552208 CLSTN1O94985 981 aa5.87□□□□□ -1.47
LSM6P2-201ENST00000552208 NME2P22392 152 aa5.87□□□□□ -1.47
LSM6P2-201ENST00000552208 ZNF165P49910 485 aa5.87□□□□□ -1.47
LSM6P2-201ENST00000552208 CASP7P55210 303 aa5.87□□□□□ -1.47
LSM6P2-201ENST00000552208 PPP2R3AQ06190 1150 aa5.87□□□□□ -1.47
LSM6P2-201ENST00000552208 DDR2Q16832 855 aa5.87□□□□□ -1.47
LSM6P2-201ENST00000552208 CWF19L2Q2TBE0 894 aaKnown RBP5.87□□□□□ -1.47
LSM6P2-201ENST00000552208 OR6P1Q8NGX9 317 aa5.87□□□□□ -1.47
LSM6P2-201ENST00000552208 STK35Q8TDR2 534 aa5.87□□□□□ -1.47
LSM6P2-201ENST00000552208 ASAP3Q8TDY4 903 aa5.87□□□□□ -1.47
LSM6P2-201ENST00000552208 GAL3ST3Q96A11 431 aa5.87□□□□□ -1.47
LSM6P2-201ENST00000552208 DNAJC7Q99615 494 aa5.87□□□□□ -1.47
LSM6P2-201ENST00000552208 MIR1-1HGQ9H1L0 117 aa5.87□□□□□ -1.47
LSM6P2-201ENST00000552208 EHMT1Q9H9B1 1298 aa5.87□□□□□ -1.47
LSM6P2-201ENST00000552208 GPN3Q9UHW5 284 aaPredicted RBP5.87□□□□□ -1.47
LSM6P2-201ENST00000552208 SOX13Q9UN79 622 aa5.87□□□□□ -1.47
LSM6P2-201ENST00000552208 SOBPA7XYQ1 873 aa5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 ATE1O95260 518 aa5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 ZNF157P51786 506 aaPredicted RBP5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 MLLT1Q03111 559 aaPredicted RBP5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 CLCQ05315 142 aa5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 PCDH1Q08174 1060 aa5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 ZNF252P-AS1Q0IIN9 211 aa5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 RASGRF1Q13972 1273 aa5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 SEPT6Q14141 434 aa5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 LCE2CQ5TA81 110 aa5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 SCARA3Q6AZY7 606 aa5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 CCDC155Q8N6L0 562 aa5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 JMYQ8N9B5 988 aa5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 GRIN3AQ8TCU5 1115 aa5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 SH3TC2Q8TF17 1288 aa5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 JARID2Q92833 1246 aaPredicted RBP5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 ZNF837Q96EG3 531 aaPredicted RBP5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 TNKS2Q9H2K2 1166 aa5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 BRMS1Q9HCU9 246 aa5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 IFT57Q9NWB7 429 aa5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 CACNA2D2Q9NY47 1150 aa5.86□□□□□ -1.47
LSM6P2-201ENST00000552208 IMPDH2P12268 514 aa5.85□□□□□ -1.47
LSM6P2-201ENST00000552208 FGFR3P22607 806 aa5.85□□□□□ -1.47
LSM6P2-201ENST00000552208 ARNTP27540 789 aa5.85□□□□□ -1.47
LSM6P2-201ENST00000552208 CTBSQ01459 385 aa5.85□□□□□ -1.47
LSM6P2-201ENST00000552208 PTPN11Q06124 597 aaPredicted RBP5.85□□□□□ -1.47
LSM6P2-201ENST00000552208 PCSK7Q16549 785 aa5.85□□□□□ -1.47
LSM6P2-201ENST00000552208 RNF187Q5TA31 235 aaPredicted RBP5.85□□□□□ -1.47
LSM6P2-201ENST00000552208 HFE2Q6ZVN8 426 aa5.85□□□□□ -1.47
LSM6P2-201ENST00000552208 KIAA0907Q7Z7F0 614 aaPredicted RBP5.85□□□□□ -1.47
LSM6P2-201ENST00000552208 PDZD3Q86UT5 571 aa5.85□□□□□ -1.47
LSM6P2-201ENST00000552208 LSRQ86X29 649 aaPredicted RBP5.85□□□□□ -1.47
LSM6P2-201ENST00000552208 MICAL1Q8TDZ2 1067 aa5.85□□□□□ -1.47
LSM6P2-201ENST00000552208 FERD3LQ96RJ6 166 aa5.85□□□□□ -1.47
LSM6P2-201ENST00000552208 ADAM19Q9H013 955 aa5.85□□□□□ -1.47
LSM6P2-201ENST00000552208 DNAJB12Q9NXW2 375 aaKnown RBP5.85□□□□□ -1.47
LSM6P2-201ENST00000552208 ACTR10Q9NZ32 417 aa5.85□□□□□ -1.47
LSM6P2-201ENST00000552208 NOP58Q9Y2X3 529 aaKnown RBP5.85□□□□□ -1.47
LSM6P2-201ENST00000552208 R3HCC1Q9Y3T6 440 aaKnown RBP5.85□□□□□ -1.47
LSM6P2-201ENST00000552208 SAMM50Q9Y512 469 aa5.85□□□□□ -1.47
LSM6P2-201ENST00000552208 PDPK1O15530 556 aa5.84□□□□□ -1.47
LSM6P2-201ENST00000552208 RAB11FIP3O75154 756 aa5.84□□□□□ -1.47
LSM6P2-201ENST00000552208 MCM4P33991 863 aa5.84□□□□□ -1.47
LSM6P2-201ENST00000552208 IGBP1P78318 339 aa5.84□□□□□ -1.47
LSM6P2-201ENST00000552208 NEUROD1Q13562 356 aa5.84□□□□□ -1.47
LSM6P2-201ENST00000552208 LRRC14Q15048 493 aa5.84□□□□□ -1.47
LSM6P2-201ENST00000552208 CEP135Q66GS9 1140 aa5.84□□□□□ -1.47
LSM6P2-201ENST00000552208 SULF2Q8IWU5 870 aa5.84□□□□□ -1.47
LSM6P2-201ENST00000552208 GTPBP3Q969Y2 492 aaKnown RBP5.84□□□□□ -1.47
LSM6P2-201ENST00000552208 CRBNQ96SW2 442 aa5.84□□□□□ -1.47
LSM6P2-201ENST00000552208 MDFIQ99750 246 aa5.84□□□□□ -1.47
LSM6P2-201ENST00000552208 FANCLQ9NW38 375 aa5.84□□□□□ -1.47
LSM6P2-201ENST00000552208 TMEM260Q9NX78 707 aa5.84□□□□□ -1.47
LSM6P2-201ENST00000552208 POLR3KQ9Y2Y1 108 aaPredicted RBP5.84□□□□□ -1.47
LSM6P2-201ENST00000552208 hCG_2014768A0A024R1R8 64 aa5.83□□□□□ -1.48
LSM6P2-201ENST00000552208 C11orf95C9JLR9 678 aaPredicted RBP5.83□□□□□ -1.48
LSM6P2-201ENST00000552208 C2CD2LO14523 706 aa5.83□□□□□ -1.48
LSM6P2-201ENST00000552208 SIN3BO75182 1162 aa5.83□□□□□ -1.48
LSM6P2-201ENST00000552208 CDC45O75419 566 aa5.83□□□□□ -1.48
LSM6P2-201ENST00000552208 SMNDC1O75940 238 aaKnown RBP eCLIP5.83□□□□□ -1.48
LSM6P2-201ENST00000552208 GHRHP01286 108 aa5.83□□□□□ -1.48
LSM6P2-201ENST00000552208 ESRRAP11474 423 aaPredicted RBP5.83□□□□□ -1.48
LSM6P2-201ENST00000552208 SELPP16109 830 aa5.83□□□□□ -1.48
LSM6P2-201ENST00000552208 ITGA6P23229 1130 aa5.83□□□□□ -1.48
LSM6P2-201ENST00000552208 RPL6Q02878 288 aaKnown RBP5.83□□□□□ -1.48
LSM6P2-201ENST00000552208 SQSTM1Q13501 440 aa5.83□□□□□ -1.48
LSM6P2-201ENST00000552208 ZNF468Q5VIY5 522 aaPredicted RBP5.83□□□□□ -1.48
LSM6P2-201ENST00000552208 LLGL2Q6P1M3 1020 aa5.83□□□□□ -1.48
LSM6P2-201ENST00000552208 GK5Q6ZS86 529 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms