RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 WEE1P30291 646 aa9.7□□□□□ -0.86
DEPDC4-210ENST00000551642 TYRO3Q06418 890 aa9.7□□□□□ -0.86
DEPDC4-210ENST00000551642 SFSWAPQ12872 951 aaKnown RBP9.7□□□□□ -0.86
DEPDC4-210ENST00000551642 PDE3BQ13370 1112 aa9.7□□□□□ -0.86
DEPDC4-210ENST00000551642 RTN1Q16799 776 aa9.7□□□□□ -0.86
DEPDC4-210ENST00000551642 IER5Q5VY09 327 aa9.7□□□□□ -0.86
DEPDC4-210ENST00000551642 LINC00114Q6XXX2 140 aa9.7□□□□□ -0.86
DEPDC4-210ENST00000551642 FAM200AQ8TCP9 573 aa9.7□□□□□ -0.86
DEPDC4-210ENST00000551642 DCAF5Q96JK2 942 aa9.7□□□□□ -0.86
DEPDC4-210ENST00000551642 MDFIQ99750 246 aa9.7□□□□□ -0.86
DEPDC4-210ENST00000551642 ARHGEF10O15013 1369 aa9.7□□□□□ -0.86
DEPDC4-210ENST00000551642 TUBGCP6Q96RT7 1819 aa9.7□□□□□ -0.86
DEPDC4-210ENST00000551642 SIN3BO75182 1162 aa9.69□□□□□ -0.86
DEPDC4-210ENST00000551642 AMPD1P23109 780 aa9.69□□□□□ -0.86
DEPDC4-210ENST00000551642 ELOAQ14241 798 aaKnown RBP9.69□□□□□ -0.86
DEPDC4-210ENST00000551642 ZNF280CQ8ND82 737 aa9.69□□□□□ -0.86
DEPDC4-210ENST00000551642 HSH2DQ96JZ2 352 aa9.69□□□□□ -0.86
DEPDC4-210ENST00000551642 CEP63Q96MT8 703 aa9.69□□□□□ -0.86
DEPDC4-210ENST00000551642 ANKRD30AQ9BXX3 1397 aa9.69□□□□□ -0.86
DEPDC4-210ENST00000551642 BRD7Q9NPI1 651 aa9.69□□□□□ -0.86
DEPDC4-210ENST00000551642 NRXN1Q9ULB1 1477 aa9.69□□□□□ -0.86
DEPDC4-210ENST00000551642 QSER1Q2KHR3 1735 aa9.68□□□□□ -0.86
DEPDC4-210ENST00000551642 LRRC37A3O60309 1634 aa9.68□□□□□ -0.86
DEPDC4-210ENST00000551642 DGKGP49619 791 aa9.68□□□□□ -0.86
DEPDC4-210ENST00000551642 PCBP4P57723 403 aaKnown RBP9.68□□□□□ -0.86
DEPDC4-210ENST00000551642 SRPK2P78362 688 aaKnown RBP9.68□□□□□ -0.86
DEPDC4-210ENST00000551642 CHSY3Q70JA7 882 aa9.68□□□□□ -0.86
DEPDC4-210ENST00000551642 RRAGCQ9HB90 399 aa9.68□□□□□ -0.86
DEPDC4-210ENST00000551642 USP35Q9P2H5 1018 aa9.68□□□□□ -0.86
DEPDC4-210ENST00000551642 KIAA1210Q9ULL0 1709 aa9.68□□□□□ -0.86
DEPDC4-210ENST00000551642 PHRF1Q9P1Y6 1649 aaKnown RBP9.67□□□□□ -0.86
DEPDC4-210ENST00000551642 ADARB2-AS1A8MUL3 147 aa9.67□□□□□ -0.86
DEPDC4-210ENST00000551642 RFX1P22670 979 aa9.67□□□□□ -0.86
DEPDC4-210ENST00000551642 ZNF326Q5BKZ1 582 aaKnown RBP9.67□□□□□ -0.86
DEPDC4-210ENST00000551642 WAPLQ7Z5K2 1190 aa9.67□□□□□ -0.86
DEPDC4-210ENST00000551642 SYT9Q86SS6 491 aa9.67□□□□□ -0.86
DEPDC4-210ENST00000551642 TNFRSF25Q93038 417 aa9.67□□□□□ -0.86
DEPDC4-210ENST00000551642 EFCC1Q9HA90 598 aa9.67□□□□□ -0.86
DEPDC4-210ENST00000551642 STK32BQ9NY57 414 aa9.67□□□□□ -0.86
DEPDC4-210ENST00000551642 KCNH4Q9UQ05 1017 aa9.67□□□□□ -0.86
DEPDC4-210ENST00000551642 KIF1BO60333 1816 aa9.67□□□□□ -0.86
DEPDC4-210ENST00000551642 CLTCL1P53675 1640 aa9.67□□□□□ -0.86
DEPDC4-210ENST00000551642 PLEKHH1Q9ULM0 1364 aa9.66□□□□□ -0.86
DEPDC4-210ENST00000551642 AKAP12Q02952 1782 aa9.66□□□□□ -0.86
DEPDC4-210ENST00000551642 ELOA3CA0A087WX78 387 aaPredicted RBP9.66□□□□□ -0.86
DEPDC4-210ENST00000551642 ELOA3DA6NLF2 546 aaPredicted RBP9.66□□□□□ -0.86
DEPDC4-210ENST00000551642 GRIN3BO60391 1043 aa9.66□□□□□ -0.86
DEPDC4-210ENST00000551642 SPEM2Q0P670 501 aa9.66□□□□□ -0.86
DEPDC4-210ENST00000551642 NEUROD1Q13562 356 aa9.66□□□□□ -0.86
DEPDC4-210ENST00000551642 SWI5Q1ZZU3 235 aa9.66□□□□□ -0.86
DEPDC4-210ENST00000551642 ELOA3BQ3SY89 546 aa9.66□□□□□ -0.86
DEPDC4-210ENST00000551642 BTLAQ7Z6A9 289 aa9.66□□□□□ -0.86
DEPDC4-210ENST00000551642 ELOA3Q8NG57 546 aa9.66□□□□□ -0.86
DEPDC4-210ENST00000551642 SLC30A3Q99726 388 aa9.66□□□□□ -0.86
DEPDC4-210ENST00000551642 NOVA2Q9UNW9 492 aaKnown RBP9.66□□□□□ -0.86
DEPDC4-210ENST00000551642 ATP7BP35670 1465 aa9.66□□□□□ -0.86
DEPDC4-210ENST00000551642 ANKRD50Q9ULJ7 1429 aa9.65□□□□□ -0.86
DEPDC4-210ENST00000551642 KNDC1Q76NI1 1749 aa9.65□□□□□ -0.86
DEPDC4-210ENST00000551642 TGFBR3LH3BV60 316 aa9.65□□□□□ -0.86
DEPDC4-210ENST00000551642 GNB5O14775 395 aa9.65□□□□□ -0.86
DEPDC4-210ENST00000551642 TXNRD1Q16881 649 aa9.65□□□□□ -0.86
DEPDC4-210ENST00000551642 GTF3C3Q9Y5Q9 886 aa9.65□□□□□ -0.86
DEPDC4-210ENST00000551642 WNK3Q9BYP7 1800 aa9.65□□□□□ -0.86
DEPDC4-210ENST00000551642 OVOS2A0A0G2JMS6 1433 aa9.65□□□□□ -0.87
DEPDC4-210ENST00000551642 OVOS2A0A0J9YW53 1432 aa9.65□□□□□ -0.87
DEPDC4-210ENST00000551642 OVOS2Q6IE36 1432 aa9.65□□□□□ -0.87
DEPDC4-210ENST00000551642 AATKQ6ZMQ8 1374 aa9.64□□□□□ -0.87
DEPDC4-210ENST00000551642 ACIN1Q9UKV3 1341 aaKnown RBP9.64□□□□□ -0.87
DEPDC4-210ENST00000551642 GRIN2CQ14957 1233 aa9.64□□□□□ -0.87
DEPDC4-210ENST00000551642 CHRNA2Q15822 529 aa9.64□□□□□ -0.87
DEPDC4-210ENST00000551642 MYO19Q96H55 970 aa9.64□□□□□ -0.87
DEPDC4-210ENST00000551642 DMGDHQ9UI17 866 aaKnown RBP9.64□□□□□ -0.87
DEPDC4-210ENST00000551642 PPLO60437 1756 aa9.64□□□□□ -0.87
DEPDC4-210ENST00000551642 LMO7Q8WWI1 1683 aa9.64□□□□□ -0.87
DEPDC4-210ENST00000551642 SSH2Q76I76 1423 aa9.64□□□□□ -0.87
DEPDC4-210ENST00000551642 ALAS2P22557 587 aa9.63□□□□□ -0.87
DEPDC4-210ENST00000551642 PLA2G4EQ3MJ16 856 aa9.63□□□□□ -0.87
DEPDC4-210ENST00000551642 CDCA8Q53HL2 280 aa9.63□□□□□ -0.87
DEPDC4-210ENST00000551642 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.63□□□□□ -0.87
DEPDC4-210ENST00000551642 TNRC18O15417 2968 aaPredicted RBP9.63□□□□□ -0.87
DEPDC4-210ENST00000551642 KIAA0232Q92628 1395 aa9.63□□□□□ -0.87
DEPDC4-210ENST00000551642 LGR5O75473 907 aa9.62□□□□□ -0.87
DEPDC4-210ENST00000551642 ATG7O95352 703 aa9.62□□□□□ -0.87
DEPDC4-210ENST00000551642 HSPA1AP0DMV8 641 aaKnown RBP9.62□□□□□ -0.87
DEPDC4-210ENST00000551642 HSPA1BP0DMV9 641 aaKnown RBP9.62□□□□□ -0.87
DEPDC4-210ENST00000551642 COL8A1P27658 744 aa9.62□□□□□ -0.87
DEPDC4-210ENST00000551642 C11orf16Q9NQ32 467 aa9.62□□□□□ -0.87
DEPDC4-210ENST00000551642 PRDM11Q9NQV5 511 aa9.62□□□□□ -0.87
DEPDC4-210ENST00000551642 NOP53Q9NZM5 478 aaKnown RBP9.62□□□□□ -0.87
DEPDC4-210ENST00000551642 ZMIZ1Q9ULJ6 1067 aa9.62□□□□□ -0.87
DEPDC4-210ENST00000551642 BCS1LQ9Y276 419 aa9.62□□□□□ -0.87
DEPDC4-210ENST00000551642 TOMM70O94826 608 aa9.61□□□□□ -0.87
DEPDC4-210ENST00000551642 DHX57Q6P158 1386 aaKnown RBP9.61□□□□□ -0.87
DEPDC4-210ENST00000551642 ITGB2P05107 769 aa9.6□□□□□ -0.87
DEPDC4-210ENST00000551642 ZNF827Q17R98 1081 aa9.6□□□□□ -0.87
DEPDC4-210ENST00000551642 GPAT2Q6NUI2 795 aa9.6□□□□□ -0.87
DEPDC4-210ENST00000551642 TCP11L2Q8N4U5 519 aa9.6□□□□□ -0.87
DEPDC4-210ENST00000551642 VTI1AQ96AJ9 217 aa9.6□□□□□ -0.87
DEPDC4-210ENST00000551642 SERPINA10Q9UK55 444 aa9.6□□□□□ -0.87
DEPDC4-210ENST00000551642 TULP4Q9NRJ4 1543 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms