RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 PHKA1P46020 1223 aa23.48■■□□□ 1.35
DDX54-208ENST00000551344 ZNF157P51786 506 aaPredicted RBP23.48■■□□□ 1.35
DDX54-208ENST00000551344 TEKT1Q969V4 418 aa23.48■■□□□ 1.35
DDX54-208ENST00000551344 XAGE2Q96GT9 111 aa23.48■■□□□ 1.35
DDX54-208ENST00000551344 MVPQ14764 893 aaKnown RBP23.47■■□□□ 1.35
DDX54-208ENST00000551344 SPDYE2Q495Y8 402 aa23.47■■□□□ 1.35
DDX54-208ENST00000551344 VEZTQ9HBM0 779 aa23.47■■□□□ 1.35
DDX54-208ENST00000551344 ZNF70Q9UC06 446 aaPredicted RBP23.47■■□□□ 1.35
DDX54-208ENST00000551344 COL1A1P02452 1464 aaPredicted RBP23.47■■□□□ 1.35
DDX54-208ENST00000551344 FOXN1O15353 648 aa23.46■■□□□ 1.35
DDX54-208ENST00000551344 TNFAIP1Q13829 316 aa23.46■■□□□ 1.35
DDX54-208ENST00000551344 HHIPL2Q6UWX4 724 aa23.46■■□□□ 1.35
DDX54-208ENST00000551344 ZDHHC15Q96MV8 337 aa23.46■■□□□ 1.35
DDX54-208ENST00000551344 NEUROD6Q96NK8 337 aa23.46■■□□□ 1.35
DDX54-208ENST00000551344 BEGAINQ9BUH8 593 aa23.46■■□□□ 1.35
DDX54-208ENST00000551344 TDRD3Q9H7E2 651 aaKnown RBP23.46■■□□□ 1.35
DDX54-208ENST00000551344 NOP58Q9Y2X3 529 aaKnown RBP23.46■■□□□ 1.35
DDX54-208ENST00000551344 AOX1Q06278 1338 aa23.45■■□□□ 1.34
DDX54-208ENST00000551344 SALL1Q9NSC2 1324 aa23.45■■□□□ 1.34
DDX54-208ENST00000551344 FAM155AB1AL88 458 aaPredicted RBP23.45■■□□□ 1.34
DDX54-208ENST00000551344 SURF6O75683 361 aaKnown RBP23.45■■□□□ 1.34
DDX54-208ENST00000551344 CTCFP49711 727 aaPredicted RBP23.45■■□□□ 1.34
DDX54-208ENST00000551344 TTLL12Q14166 644 aaPredicted RBP23.45■■□□□ 1.34
DDX54-208ENST00000551344 SUPT20HL1Q3ZLR7 823 aa23.45■■□□□ 1.34
DDX54-208ENST00000551344 ARMC9Q7Z3E5 817 aa23.45■■□□□ 1.34
DDX54-208ENST00000551344 CHMP4BQ9H444 224 aaKnown RBP23.45■■□□□ 1.34
DDX54-208ENST00000551344 DDX19BQ9UMR2 479 aa23.45■■□□□ 1.34
DDX54-208ENST00000551344 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.45■■□□□ 1.34
DDX54-208ENST00000551344 UBE2Q2LH0YL09 131 aa23.44■■□□□ 1.34
DDX54-208ENST00000551344 RASA3Q14644 834 aa23.44■■□□□ 1.34
DDX54-208ENST00000551344 ZGPATQ8N5A5 531 aaKnown RBP23.44■■□□□ 1.34
DDX54-208ENST00000551344 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.44■■□□□ 1.34
DDX54-208ENST00000551344 GPR108Q9NPR9 543 aa23.44■■□□□ 1.34
DDX54-208ENST00000551344 PAPPA2Q9BXP8 1791 aa23.43■■□□□ 1.34
DDX54-208ENST00000551344 PDS5AQ29RF7 1337 aaKnown RBP23.43■■□□□ 1.34
DDX54-208ENST00000551344 OS9Q13438 667 aaPredicted RBP23.43■■□□□ 1.34
DDX54-208ENST00000551344 GORABQ5T7V8 394 aa23.43■■□□□ 1.34
DDX54-208ENST00000551344 CEP85Q6P2H3 762 aa23.43■■□□□ 1.34
DDX54-208ENST00000551344 MOB2Q70IA6 237 aa23.43■■□□□ 1.34
DDX54-208ENST00000551344 ARAP2Q8WZ64 1704 aa23.42■■□□□ 1.34
DDX54-208ENST00000551344 LDHBP07195 334 aaKnown RBP23.42■■□□□ 1.34
DDX54-208ENST00000551344 SLC10A3P09131 477 aa23.42■■□□□ 1.34
DDX54-208ENST00000551344 TNNI2P48788 182 aa23.42■■□□□ 1.34
DDX54-208ENST00000551344 PDE3AQ14432 1141 aa23.42■■□□□ 1.34
DDX54-208ENST00000551344 APOBEC3HQ6NTF7 200 aaKnown RBP23.42■■□□□ 1.34
DDX54-208ENST00000551344 COG6Q9Y2V7 657 aa23.42■■□□□ 1.34
DDX54-208ENST00000551344 THSD7BQ9C0I4 1608 aa23.41■■□□□ 1.34
DDX54-208ENST00000551344 ECM29Q5VYK3 1845 aa23.41■■□□□ 1.34
DDX54-208ENST00000551344 PPP1R12BO60237 982 aaPredicted RBP23.41■■□□□ 1.34
DDX54-208ENST00000551344 RASGRF1Q13972 1273 aa23.41■■□□□ 1.34
DDX54-208ENST00000551344 COL13A1Q5TAT6 717 aaPredicted RBP23.41■■□□□ 1.34
DDX54-208ENST00000551344 ZIC5Q96T25 663 aa23.41■■□□□ 1.34
DDX54-208ENST00000551344 PRDM10Q9NQV6 1147 aa23.41■■□□□ 1.34
DDX54-208ENST00000551344 CA12O43570 354 aa23.4■■□□□ 1.34
DDX54-208ENST00000551344 PRDX5P30044 214 aa23.4■■□□□ 1.34
DDX54-208ENST00000551344 MAP3K11Q16584 847 aa23.4■■□□□ 1.34
DDX54-208ENST00000551344 LDLRAD1Q5T700 205 aa23.4■■□□□ 1.34
DDX54-208ENST00000551344 NBPF12Q5TAG4 269 aaPredicted RBP23.4■■□□□ 1.34
DDX54-208ENST00000551344 FKBP1CQ5VVH2 108 aa23.4■■□□□ 1.34
DDX54-208ENST00000551344 RPAP2Q8IXW5 612 aaPredicted RBP23.4■■□□□ 1.34
DDX54-208ENST00000551344 REM2Q8IYK8 340 aaPredicted RBP23.4■■□□□ 1.34
DDX54-208ENST00000551344 ZBTB40Q9NUA8 1239 aa23.4■■□□□ 1.34
DDX54-208ENST00000551344 UNCXA6NJT0 531 aa23.39■■□□□ 1.33
DDX54-208ENST00000551344 TCP10L2B9ZVM9 353 aa23.39■■□□□ 1.33
DDX54-208ENST00000551344 KIF23Q02241 960 aaPredicted RBP23.39■■□□□ 1.33
DDX54-208ENST00000551344 PRKG1Q13976 671 aa23.39■■□□□ 1.33
DDX54-208ENST00000551344 TNNI3KQ59H18 835 aa23.39■■□□□ 1.33
DDX54-208ENST00000551344 SPTY2D1Q68D10 685 aaPredicted RBP23.39■■□□□ 1.33
DDX54-208ENST00000551344 RASAL3Q86YV0 1011 aa23.39■■□□□ 1.33
DDX54-208ENST00000551344 TMOD2Q9NZR1 351 aa23.39■■□□□ 1.33
DDX54-208ENST00000551344 ANGEL1Q9UNK9 670 aaKnown RBP23.39■■□□□ 1.33
DDX54-208ENST00000551344 FPGT-TNNI3KV9GXZ4 949 aa23.39■■□□□ 1.33
DDX54-208ENST00000551344 MYH13Q9UKX3 1938 aa23.37■■□□□ 1.33
DDX54-208ENST00000551344 UQCRFS1P1P0C7P4 283 aa23.37■■□□□ 1.33
DDX54-208ENST00000551344 HSPA8P11142 646 aaKnown RBP23.37■■□□□ 1.33
DDX54-208ENST00000551344 ARID4AP29374 1257 aaPredicted RBP23.37■■□□□ 1.33
DDX54-208ENST00000551344 LBX1P52954 281 aa23.37■■□□□ 1.33
DDX54-208ENST00000551344 FAM83AQ86UY5 434 aa23.37■■□□□ 1.33
DDX54-208ENST00000551344 DAGLAQ9Y4D2 1042 aa23.37■■□□□ 1.33
DDX54-208ENST00000551344 DIXDC1Q155Q3 683 aa23.36■■□□□ 1.33
DDX54-208ENST00000551344 HSP90AB4PQ58FF6 505 aa23.36■■□□□ 1.33
DDX54-208ENST00000551344 CCDC158Q5M9N0 1113 aa23.36■■□□□ 1.33
DDX54-208ENST00000551344 ERC1Q8IUD2 1116 aa23.36■■□□□ 1.33
DDX54-208ENST00000551344 SLF2Q8IX21 1173 aa23.36■■□□□ 1.33
DDX54-208ENST00000551344 SPATA5Q8NB90 893 aa23.36■■□□□ 1.33
DDX54-208ENST00000551344 TEPSINQ96N21 525 aa23.36■■□□□ 1.33
DDX54-208ENST00000551344 HMG20BQ9P0W2 317 aa23.36■■□□□ 1.33
DDX54-208ENST00000551344 ABCF2Q9UG63 623 aa23.36■■□□□ 1.33
DDX54-208ENST00000551344 HMMRO75330 724 aa23.35■■□□□ 1.33
DDX54-208ENST00000551344 USP2O75604 605 aaPredicted RBP23.35■■□□□ 1.33
DDX54-208ENST00000551344 IREB2P48200 963 aaKnown RBP23.35■■□□□ 1.33
DDX54-208ENST00000551344 CSRNP1Q96S65 589 aa23.35■■□□□ 1.33
DDX54-208ENST00000551344 TMEM39BQ9GZU3 492 aa23.35■■□□□ 1.33
DDX54-208ENST00000551344 CACNB3P54284 484 aa23.34■■□□□ 1.33
DDX54-208ENST00000551344 ERICH6Q7L0X2 663 aa23.34■■□□□ 1.33
DDX54-208ENST00000551344 SLC10A4Q96EP9 437 aa23.34■■□□□ 1.33
DDX54-208ENST00000551344 FAM163AQ96GL9 167 aaPredicted RBP23.34■■□□□ 1.33
DDX54-208ENST00000551344 FZD1Q9UP38 647 aa23.34■■□□□ 1.33
DDX54-208ENST00000551344 C20orf194Q5TEA3 1177 aa23.33■■□□□ 1.33
DDX54-208ENST00000551344 CDC42EP5Q6NZY7 148 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms