RNA–Protein interactions for RNA: ENST00000551339.5

PFKM-222, Transcript of phosphofructokinase, muscle, human

TSL 4

Gene PFKM, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-222	ENST00000551339	IL15	P40933	162 aa	Predicted RBP	12.01	□□□□□ -0.49
PFKM-222	ENST00000551339	HDLBP	Q00341	1268 aa	Known RBP	12.01	□□□□□ -0.49
PFKM-222	ENST00000551339	RASA3	Q14644	834 aa		12.01	□□□□□ -0.49
PFKM-222	ENST00000551339	MAP3K11	Q16584	847 aa		12.01	□□□□□ -0.49
PFKM-222	ENST00000551339	SPDYE2	Q495Y8	402 aa		12.01	□□□□□ -0.49
PFKM-222	ENST00000551339	FTSJ3	Q8IY81	847 aa	Known RBP	12.01	□□□□□ -0.49
PFKM-222	ENST00000551339	TMEM57	Q8N5G2	664 aa		12.01	□□□□□ -0.49
PFKM-222	ENST00000551339	MRI	Q9BWK5	157 aa		12.01	□□□□□ -0.49
PFKM-222	ENST00000551339	TDRD3	Q9H7E2	651 aa	Known RBP	12.01	□□□□□ -0.49
PFKM-222	ENST00000551339	VEZT	Q9HBM0	779 aa		12.01	□□□□□ -0.49
PFKM-222	ENST00000551339	SAGE1	Q9NXZ1	904 aa		12.01	□□□□□ -0.49
PFKM-222	ENST00000551339	ZNF70	Q9UC06	446 aa	Predicted RBP	12.01	□□□□□ -0.49
PFKM-222	ENST00000551339	ANGEL1	Q9UNK9	670 aa	Known RBP	12.01	□□□□□ -0.49
PFKM-222	ENST00000551339	FZD1	Q9UP38	647 aa		12.01	□□□□□ -0.49
PFKM-222	ENST00000551339	COL1A1	P02452	1464 aa	Predicted RBP	12.01	□□□□□ -0.49
PFKM-222	ENST00000551339	TRPA1	O75762	1119 aa		12	□□□□□ -0.49
PFKM-222	ENST00000551339	MTX1	Q13505	466 aa		12	□□□□□ -0.49
PFKM-222	ENST00000551339	ATP2B3	Q16720	1220 aa		12	□□□□□ -0.49
PFKM-222	ENST00000551339	SUPT20HL1	Q3ZLR7	823 aa		12	□□□□□ -0.49
PFKM-222	ENST00000551339	NBPF12	Q5TAG4	269 aa	Predicted RBP	12	□□□□□ -0.49
PFKM-222	ENST00000551339	SRGAP3	O43295	1099 aa		11.99	□□□□□ -0.49
PFKM-222	ENST00000551339	PPP1R12B	O60237	982 aa	Predicted RBP	11.99	□□□□□ -0.49
PFKM-222	ENST00000551339	GNAI2	P04899	355 aa		11.99	□□□□□ -0.49
PFKM-222	ENST00000551339	TM4SF4	P48230	202 aa		11.99	□□□□□ -0.49
PFKM-222	ENST00000551339	TEPSIN	Q96N21	525 aa		11.99	□□□□□ -0.49
PFKM-222	ENST00000551339	SUGT1	Q9Y2Z0	365 aa		11.99	□□□□□ -0.49
PFKM-222	ENST00000551339	SSC5D	A1L4H1	1573 aa		11.98	□□□□□ -0.49
PFKM-222	ENST00000551339	UNCX	A6NJT0	531 aa		11.98	□□□□□ -0.49
PFKM-222	ENST00000551339	USP2	O75604	605 aa	Predicted RBP	11.98	□□□□□ -0.49
PFKM-222	ENST00000551339	RLBP1	P12271	317 aa		11.98	□□□□□ -0.49
PFKM-222	ENST00000551339	TIMM10	P62072	90 aa		11.98	□□□□□ -0.49
PFKM-222	ENST00000551339	TNFAIP1	Q13829	316 aa		11.98	□□□□□ -0.49
PFKM-222	ENST00000551339	SPRYD7	Q5W111	196 aa		11.98	□□□□□ -0.49
PFKM-222	ENST00000551339	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.98	□□□□□ -0.49
PFKM-222	ENST00000551339	WDR66	Q8TBY9	1149 aa		11.98	□□□□□ -0.49
PFKM-222	ENST00000551339	TEKT1	Q969V4	418 aa		11.98	□□□□□ -0.49
PFKM-222	ENST00000551339	SLC10A4	Q96EP9	437 aa		11.98	□□□□□ -0.49
PFKM-222	ENST00000551339	ABHD8	Q96I13	439 aa		11.98	□□□□□ -0.49
PFKM-222	ENST00000551339	ZDHHC15	Q96MV8	337 aa		11.98	□□□□□ -0.49
PFKM-222	ENST00000551339	TCP10L2	B9ZVM9	353 aa		11.97	□□□□□ -0.49
PFKM-222	ENST00000551339	ZBTB7B	O15156	539 aa	Predicted RBP	11.97	□□□□□ -0.49
PFKM-222	ENST00000551339	ZBTB22	O15209	634 aa		11.97	□□□□□ -0.49
PFKM-222	ENST00000551339	ADORA1	P30542	326 aa		11.97	□□□□□ -0.49
PFKM-222	ENST00000551339	PHKA1	P46020	1223 aa		11.97	□□□□□ -0.49
PFKM-222	ENST00000551339	MKRN3	Q13064	507 aa	Known RBP	11.97	□□□□□ -0.49
PFKM-222	ENST00000551339	HHIPL2	Q6UWX4	724 aa		11.97	□□□□□ -0.49
PFKM-222	ENST00000551339	CDAN1	Q8IWY9	1227 aa		11.97	□□□□□ -0.49
PFKM-222	ENST00000551339	GNL3L	Q9NVN8	582 aa	Known RBP	11.97	□□□□□ -0.49
PFKM-222	ENST00000551339	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.97	□□□□□ -0.49
PFKM-222	ENST00000551339	MAST3	O60307	1309 aa		11.96	□□□□□ -0.49
PFKM-222	ENST00000551339	ECM29	Q5VYK3	1845 aa		11.96	□□□□□ -0.49
PFKM-222	ENST00000551339	PNMA6E	A0A0J9YXQ4	647 aa		11.96	□□□□□ -0.49
PFKM-222	ENST00000551339	TNNI2	P48788	182 aa		11.96	□□□□□ -0.49
PFKM-222	ENST00000551339	CACNB3	P54284	484 aa		11.96	□□□□□ -0.49
PFKM-222	ENST00000551339	TFCP2	Q12800	502 aa		11.96	□□□□□ -0.49
PFKM-222	ENST00000551339	CCDC102B	Q68D86	513 aa		11.96	□□□□□ -0.49
PFKM-222	ENST00000551339	ITPRIP	Q8IWB1	547 aa		11.96	□□□□□ -0.49
PFKM-222	ENST00000551339	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.96	□□□□□ -0.49
PFKM-222	ENST00000551339	CLMN	Q96JQ2	1002 aa		11.96	□□□□□ -0.49
PFKM-222	ENST00000551339	TMEM39B	Q9GZU3	492 aa		11.96	□□□□□ -0.49
PFKM-222	ENST00000551339	SEMA3E	O15041	775 aa		11.95	□□□□□ -0.5
PFKM-222	ENST00000551339	TBC1D8	O95759	1140 aa		11.95	□□□□□ -0.5
PFKM-222	ENST00000551339	IREB2	P48200	963 aa	Known RBP	11.95	□□□□□ -0.5
PFKM-222	ENST00000551339	PDE3A	Q14432	1141 aa		11.95	□□□□□ -0.5
PFKM-222	ENST00000551339	FKBP1C	Q5VVH2	108 aa		11.95	□□□□□ -0.5
PFKM-222	ENST00000551339	ANKRD13A	Q8IZ07	590 aa		11.95	□□□□□ -0.5
PFKM-222	ENST00000551339	PANK1	Q8TE04	598 aa		11.95	□□□□□ -0.5
PFKM-222	ENST00000551339	MCOLN1	Q9GZU1	580 aa		11.95	□□□□□ -0.5
PFKM-222	ENST00000551339	DENND2A	Q9ULE3	1009 aa		11.95	□□□□□ -0.5
PFKM-222	ENST00000551339	AKAP2	Q9Y2D5	859 aa		11.95	□□□□□ -0.5
PFKM-222	ENST00000551339	CASP8AP2	Q9UKL3	1982 aa		11.95	□□□□□ -0.5
PFKM-222	ENST00000551339	ARAP2	Q8WZ64	1704 aa		11.94	□□□□□ -0.5
PFKM-222	ENST00000551339	SALL1	Q9NSC2	1324 aa		11.94	□□□□□ -0.5
PFKM-222	ENST00000551339		A0A1B0GUL7	405 aa		11.94	□□□□□ -0.5
PFKM-222	ENST00000551339	LDHB	P07195	334 aa	Known RBP	11.94	□□□□□ -0.5
PFKM-222	ENST00000551339	ZBTB48	P10074	688 aa	Predicted RBP	11.94	□□□□□ -0.5
PFKM-222	ENST00000551339	PRDX5	P30044	214 aa		11.94	□□□□□ -0.5
PFKM-222	ENST00000551339	INHBE	P58166	350 aa		11.94	□□□□□ -0.5
PFKM-222	ENST00000551339	SREBF2	Q12772	1141 aa		11.94	□□□□□ -0.5
PFKM-222	ENST00000551339	FAM83A	Q86UY5	434 aa		11.94	□□□□□ -0.5
PFKM-222	ENST00000551339	XAGE2	Q96GT9	111 aa		11.94	□□□□□ -0.5
PFKM-222	ENST00000551339	WNK4	Q96J92	1243 aa		11.94	□□□□□ -0.5
PFKM-222	ENST00000551339	CHMP4B	Q9H444	224 aa	Known RBP	11.94	□□□□□ -0.5
PFKM-222	ENST00000551339	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.94	□□□□□ -0.5
PFKM-222	ENST00000551339	MANSC4	A6NHS7	340 aa	Predicted RBP	11.93	□□□□□ -0.5
PFKM-222	ENST00000551339	GJA5	P36382	358 aa		11.93	□□□□□ -0.5
PFKM-222	ENST00000551339	ATP8B2	P98198	1209 aa		11.93	□□□□□ -0.5
PFKM-222	ENST00000551339	MLLT1	Q03111	559 aa	Predicted RBP	11.93	□□□□□ -0.5
PFKM-222	ENST00000551339	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
PFKM-222	ENST00000551339	DGKZ	Q13574	1117 aa		11.93	□□□□□ -0.5
PFKM-222	ENST00000551339	RASGRF1	Q13972	1273 aa		11.93	□□□□□ -0.5
PFKM-222	ENST00000551339	POLA2	Q14181	598 aa		11.93	□□□□□ -0.5
PFKM-222	ENST00000551339	MVP	Q14764	893 aa	Known RBP	11.93	□□□□□ -0.5
PFKM-222	ENST00000551339	DIXDC1	Q155Q3	683 aa		11.93	□□□□□ -0.5
PFKM-222	ENST00000551339	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.93	□□□□□ -0.5
PFKM-222	ENST00000551339	YTHDC1	Q96MU7	727 aa	Known RBP	11.93	□□□□□ -0.5
PFKM-222	ENST00000551339	CFHR5	Q9BXR6	569 aa		11.93	□□□□□ -0.5
PFKM-222	ENST00000551339	TMOD2	Q9NZR1	351 aa		11.93	□□□□□ -0.5
PFKM-222	ENST00000551339	DDX19B	Q9UMR2	479 aa		11.93	□□□□□ -0.5
PFKM-222	ENST00000551339	DAGLA	Q9Y4D2	1042 aa		11.93	□□□□□ -0.5

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