RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 TNFAIP1Q13829 316 aa18.7■□□□□ 0.58
TMEM106C-216ENST00000551305 LRRC24Q50LG9 513 aa18.7■□□□□ 0.58
TMEM106C-216ENST00000551305 OTUD7BQ6GQQ9 843 aa18.7■□□□□ 0.58
TMEM106C-216ENST00000551305 FAM9BQ8IZU0 186 aa18.7■□□□□ 0.58
TMEM106C-216ENST00000551305 TMEM39BQ9GZU3 492 aa18.7■□□□□ 0.58
TMEM106C-216ENST00000551305 CHAF1AQ13111 956 aaPredicted RBP18.69■□□□□ 0.58
TMEM106C-216ENST00000551305 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.69■□□□□ 0.58
TMEM106C-216ENST00000551305 FBXO33Q7Z6M2 555 aa18.69■□□□□ 0.58
TMEM106C-216ENST00000551305 ERO1AQ96HE7 468 aa18.69■□□□□ 0.58
TMEM106C-216ENST00000551305 BICC1Q9H694 974 aaKnown RBP18.69■□□□□ 0.58
TMEM106C-216ENST00000551305 PTPN22Q9Y2R2 807 aa18.69■□□□□ 0.58
TMEM106C-216ENST00000551305 CACNB3P54284 484 aa18.68■□□□□ 0.58
TMEM106C-216ENST00000551305 MS4A4AQ96JQ5 239 aa18.68■□□□□ 0.58
TMEM106C-216ENST00000551305 MROH5Q6ZUA9 1318 aa18.68■□□□□ 0.58
TMEM106C-216ENST00000551305 UTYO14607 1347 aa18.68■□□□□ 0.58
TMEM106C-216ENST00000551305 MAP3K9P80192 1104 aa18.68■□□□□ 0.58
TMEM106C-216ENST00000551305 SP3Q02447 781 aa18.68■□□□□ 0.58
TMEM106C-216ENST00000551305 VPS37DQ86XT2 251 aa18.68■□□□□ 0.58
TMEM106C-216ENST00000551305 ANKRD44Q8N8A2 993 aa18.68■□□□□ 0.58
TMEM106C-216ENST00000551305 EFCC1Q9HA90 598 aa18.68■□□□□ 0.58
TMEM106C-216ENST00000551305 PCDH10Q9P2E7 1040 aa18.68■□□□□ 0.58
TMEM106C-216ENST00000551305 VGLL4Q14135 290 aa18.67■□□□□ 0.58
TMEM106C-216ENST00000551305 RABL6Q3YEC7 729 aaPredicted RBP18.67■□□□□ 0.58
TMEM106C-216ENST00000551305 METTL24Q5JXM2 366 aa18.67■□□□□ 0.58
TMEM106C-216ENST00000551305 KLHDC4Q8TBB5 520 aa18.67■□□□□ 0.58
TMEM106C-216ENST00000551305 BRI3BPQ8WY22 251 aa18.67■□□□□ 0.58
TMEM106C-216ENST00000551305 OTOFQ9HC10 1997 aa18.66■□□□□ 0.58
TMEM106C-216ENST00000551305 FRAT2O75474 233 aaPredicted RBP18.66■□□□□ 0.58
TMEM106C-216ENST00000551305 TNNI2P48788 182 aa18.66■□□□□ 0.58
TMEM106C-216ENST00000551305 BCAMP50895 628 aa18.66■□□□□ 0.58
TMEM106C-216ENST00000551305 INTS3Q68E01 1043 aaKnown RBP18.66■□□□□ 0.58
TMEM106C-216ENST00000551305 MRPL50Q8N5N7 158 aaKnown RBP18.66■□□□□ 0.58
TMEM106C-216ENST00000551305 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.66■□□□□ 0.58
TMEM106C-216ENST00000551305 LAMB1P07942 1786 aa18.66■□□□□ 0.58
TMEM106C-216ENST00000551305 CCL15-CCL14A0A0B4J2E2 113 aa18.65■□□□□ 0.58
TMEM106C-216ENST00000551305 CCL15Q16663 113 aa18.65■□□□□ 0.58
TMEM106C-216ENST00000551305 CAVIN4Q5BKX8 364 aa18.65■□□□□ 0.58
TMEM106C-216ENST00000551305 FAM43AQ8N2R8 423 aa18.65■□□□□ 0.58
TMEM106C-216ENST00000551305 VGLL2Q8N8G2 317 aa18.65■□□□□ 0.58
TMEM106C-216ENST00000551305 OTUD5Q96G74 571 aa18.65■□□□□ 0.58
TMEM106C-216ENST00000551305 PDE8BO95263 885 aa18.64■□□□□ 0.57
TMEM106C-216ENST00000551305 EN2P19622 333 aaPredicted RBP18.63■□□□□ 0.57
TMEM106C-216ENST00000551305 GTF2A2P52657 109 aa18.63■□□□□ 0.57
TMEM106C-216ENST00000551305 TAF1CQ15572 869 aaPredicted RBP18.63■□□□□ 0.57
TMEM106C-216ENST00000551305 TBC1D22AQ8WUA7 517 aa18.63■□□□□ 0.57
TMEM106C-216ENST00000551305 TEKT1Q969V4 418 aa18.63■□□□□ 0.57
TMEM106C-216ENST00000551305 ARMC5Q96C12 935 aa18.63■□□□□ 0.57
TMEM106C-216ENST00000551305 CSADQ9Y600 493 aa18.63■□□□□ 0.57
TMEM106C-216ENST00000551305 ZNF521Q96K83 1311 aa18.62■□□□□ 0.57
TMEM106C-216ENST00000551305 HDLBPQ00341 1268 aaKnown RBP18.62■□□□□ 0.57
TMEM106C-216ENST00000551305 APOBEC3HQ6NTF7 200 aaKnown RBP18.62■□□□□ 0.57
TMEM106C-216ENST00000551305 ZFYVE28Q9HCC9 887 aa18.62■□□□□ 0.57
TMEM106C-216ENST00000551305 SNCAIPQ9Y6H5 919 aa18.62■□□□□ 0.57
TMEM106C-216ENST00000551305 ARAP2Q8WZ64 1704 aa18.61■□□□□ 0.57
TMEM106C-216ENST00000551305 ZNF316A6NFI3 1004 aaPredicted RBP18.61■□□□□ 0.57
TMEM106C-216ENST00000551305 ZKSCAN4Q969J2 545 aaPredicted RBP18.61■□□□□ 0.57
TMEM106C-216ENST00000551305 ZDHHC15Q96MV8 337 aa18.61■□□□□ 0.57
TMEM106C-216ENST00000551305 USP44Q9H0E7 712 aa18.61■□□□□ 0.57
TMEM106C-216ENST00000551305 SPDYE5A6NIY4 337 aa18.6■□□□□ 0.57
TMEM106C-216ENST00000551305 PTCH2Q9Y6C5 1203 aa18.6■□□□□ 0.57
TMEM106C-216ENST00000551305 HTTP42858 3142 aa18.59■□□□□ 0.57
TMEM106C-216ENST00000551305 FGFR2P21802 821 aa18.59■□□□□ 0.57
TMEM106C-216ENST00000551305 SSH1Q8WYL5 1049 aa18.59■□□□□ 0.57
TMEM106C-216ENST00000551305 WRNIP1Q96S55 665 aa18.59■□□□□ 0.57
TMEM106C-216ENST00000551305 MRIQ9BWK5 157 aa18.59■□□□□ 0.57
TMEM106C-216ENST00000551305 BTBD19C9JJ37 291 aa18.58■□□□□ 0.57
TMEM106C-216ENST00000551305 IRF6O14896 467 aa18.58■□□□□ 0.57
TMEM106C-216ENST00000551305 MYCP01106 439 aaPredicted RBP18.58■□□□□ 0.57
TMEM106C-216ENST00000551305 IFIT1P09914 478 aaKnown RBP18.58■□□□□ 0.57
TMEM106C-216ENST00000551305 MIGA2Q7L4E1 593 aa18.58■□□□□ 0.57
TMEM106C-216ENST00000551305 ZNF333Q96JL9 665 aa18.58■□□□□ 0.57
TMEM106C-216ENST00000551305 ARHGAP39Q9C0H5 1083 aa18.58■□□□□ 0.57
TMEM106C-216ENST00000551305 TMOD2Q9NZR1 351 aa18.58■□□□□ 0.57
TMEM106C-216ENST00000551305 ECM2O94769 699 aaPredicted RBP18.57■□□□□ 0.56
TMEM106C-216ENST00000551305 RFX5P48382 616 aaPredicted RBP18.57■□□□□ 0.56
TMEM106C-216ENST00000551305 PUM3Q15397 648 aaKnown RBP18.57■□□□□ 0.56
TMEM106C-216ENST00000551305 FAM83AQ86UY5 434 aa18.57■□□□□ 0.56
TMEM106C-216ENST00000551305 ERO1BQ86YB8 467 aa18.57■□□□□ 0.56
TMEM106C-216ENST00000551305 PTPRCP08575 1304 aa18.57■□□□□ 0.56
TMEM106C-216ENST00000551305 CETPP11597 493 aa18.56■□□□□ 0.56
TMEM106C-216ENST00000551305 HHIPL2Q6UWX4 724 aa18.56■□□□□ 0.56
TMEM106C-216ENST00000551305 TMEM106CQ9BVX2 250 aa18.56■□□□□ 0.56
TMEM106C-216ENST00000551305 EYA2O00167 538 aa18.55■□□□□ 0.56
TMEM106C-216ENST00000551305 TLR2O60603 784 aa18.55■□□□□ 0.56
TMEM106C-216ENST00000551305 INPP5BP32019 993 aa18.55■□□□□ 0.56
TMEM106C-216ENST00000551305 ARHGEF6Q15052 776 aa18.55■□□□□ 0.56
TMEM106C-216ENST00000551305 SLC9C1Q4G0N8 1177 aa18.55■□□□□ 0.56
TMEM106C-216ENST00000551305 FKBP1CQ5VVH2 108 aa18.55■□□□□ 0.56
TMEM106C-216ENST00000551305 SUGT1Q9Y2Z0 365 aa18.55■□□□□ 0.56
TMEM106C-216ENST00000551305 MAST3O60307 1309 aa18.55■□□□□ 0.56
TMEM106C-216ENST00000551305 TCP10Q12799 353 aa18.55■□□□□ 0.56
TMEM106C-216ENST00000551305 SNAPC2Q13487 334 aa18.55■□□□□ 0.56
TMEM106C-216ENST00000551305 HABP4Q5JVS0 413 aaKnown RBP18.55■□□□□ 0.56
TMEM106C-216ENST00000551305 ATG9AQ7Z3C6 839 aa18.55■□□□□ 0.56
TMEM106C-216ENST00000551305 SH3TC2Q8TF17 1288 aa18.55■□□□□ 0.56
TMEM106C-216ENST00000551305 GCC1Q96CN9 775 aa18.55■□□□□ 0.56
TMEM106C-216ENST00000551305 KIF16BQ96L93 1317 aa18.54■□□□□ 0.56
TMEM106C-216ENST00000551305 KIAA0100Q14667 2235 aaKnown RBP18.54■□□□□ 0.56
TMEM106C-216ENST00000551305 SLC5A1P13866 664 aa18.54■□□□□ 0.56
TMEM106C-216ENST00000551305 PPIL2Q13356 520 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms