RNA–Protein interactions for RNA: ENST00000550928.1

CR383656.13-201, humanhuman

TSL 3 BASIC

Gene CR383656.13, Length 563 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR383656.13-201ENST00000550928 GNL3LQ9NVN8 582 aaKnown RBP16.68■□□□□ 0.26
CR383656.13-201ENST00000550928 ZNF70Q9UC06 446 aaPredicted RBP16.68■□□□□ 0.26
CR383656.13-201ENST00000550928 AKAP2Q9Y2D5 859 aa16.68■□□□□ 0.26
CR383656.13-201ENST00000550928 SUGT1Q9Y2Z0 365 aa16.68■□□□□ 0.26
CR383656.13-201ENST00000550928 G3BP1Q13283 466 aaKnown RBP eCLIP16.67■□□□□ 0.26
CR383656.13-201ENST00000550928 POLA2Q14181 598 aa16.67■□□□□ 0.26
CR383656.13-201ENST00000550928 ITPRIPQ8IWB1 547 aa16.67■□□□□ 0.26
CR383656.13-201ENST00000550928 PRDM10Q9NQV6 1147 aa16.67■□□□□ 0.26
CR383656.13-201ENST00000550928 PPP2R3BQ9Y5P8 575 aa16.67■□□□□ 0.26
CR383656.13-201ENST00000550928 ZBTB22O15209 634 aa16.66■□□□□ 0.26
CR383656.13-201ENST00000550928 SLC10A3P09131 477 aa16.66■□□□□ 0.26
CR383656.13-201ENST00000550928 ADORA1P30542 326 aa16.66■□□□□ 0.26
CR383656.13-201ENST00000550928 PHKA1P46020 1223 aa16.66■□□□□ 0.26
CR383656.13-201ENST00000550928 LBX1P52954 281 aa16.66■□□□□ 0.26
CR383656.13-201ENST00000550928 KIF23Q02241 960 aaPredicted RBP16.66■□□□□ 0.26
CR383656.13-201ENST00000550928 TTLL12Q14166 644 aaPredicted RBP16.66■□□□□ 0.26
CR383656.13-201ENST00000550928 SPDYE2Q495Y8 402 aa16.66■□□□□ 0.26
CR383656.13-201ENST00000550928 IFFO2Q5TF58 517 aa16.66■□□□□ 0.26
CR383656.13-201ENST00000550928 ARMC9Q7Z3E5 817 aa16.66■□□□□ 0.26
CR383656.13-201ENST00000550928 RNF39Q9H2S5 420 aa16.66■□□□□ 0.26
CR383656.13-201ENST00000550928 VEZTQ9HBM0 779 aa16.66■□□□□ 0.26
CR383656.13-201ENST00000550928 SEMA3EO15041 775 aa16.65■□□□□ 0.26
CR383656.13-201ENST00000550928 HSPA8P11142 646 aaKnown RBP16.65■□□□□ 0.26
CR383656.13-201ENST00000550928 MS4A1P11836 297 aa16.65■□□□□ 0.26
CR383656.13-201ENST00000550928 PRKG1Q13976 671 aa16.65■□□□□ 0.26
CR383656.13-201ENST00000550928 RASA3Q14644 834 aa16.65■□□□□ 0.26
CR383656.13-201ENST00000550928 SUPT20HL1Q3ZLR7 823 aa16.65■□□□□ 0.26
CR383656.13-201ENST00000550928 CCDC102BQ68D86 513 aa16.65■□□□□ 0.26
CR383656.13-201ENST00000550928 HHIPL2Q6UWX4 724 aa16.65■□□□□ 0.26
CR383656.13-201ENST00000550928 PANK1Q8TE04 598 aa16.65■□□□□ 0.26
CR383656.13-201ENST00000550928 SSH3Q8TE77 659 aa16.65■□□□□ 0.26
CR383656.13-201ENST00000550928 TEKT1Q969V4 418 aa16.65■□□□□ 0.26
CR383656.13-201ENST00000550928 DENND2AQ9ULE3 1009 aa16.65■□□□□ 0.26
CR383656.13-201ENST00000550928 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.65■□□□□ 0.26
CR383656.13-201ENST00000550928 THSD7BQ9C0I4 1608 aa16.65■□□□□ 0.26
CR383656.13-201ENST00000550928 ECM29Q5VYK3 1845 aa16.65■□□□□ 0.26
CR383656.13-201ENST00000550928 PAPPA2Q9BXP8 1791 aa16.64■□□□□ 0.25
CR383656.13-201ENST00000550928 A0A1B0GUL7 405 aa16.64■□□□□ 0.25
CR383656.13-201ENST00000550928 NPM3O75607 178 aaKnown RBP16.64■□□□□ 0.25
CR383656.13-201ENST00000550928 LDLRAD1Q5T700 205 aa16.64■□□□□ 0.25
CR383656.13-201ENST00000550928 XAGE2Q96GT9 111 aa16.64■□□□□ 0.25
CR383656.13-201ENST00000550928 COL1A1P02452 1464 aaPredicted RBP16.64■□□□□ 0.25
CR383656.13-201ENST00000550928 CA12O43570 354 aa16.63■□□□□ 0.25
CR383656.13-201ENST00000550928 TNFAIP1Q13829 316 aa16.63■□□□□ 0.25
CR383656.13-201ENST00000550928 MAP3K11Q16584 847 aa16.63■□□□□ 0.25
CR383656.13-201ENST00000550928 NBPF12Q5TAG4 269 aaPredicted RBP16.63■□□□□ 0.25
CR383656.13-201ENST00000550928 APOBEC3HQ6NTF7 200 aaKnown RBP16.63■□□□□ 0.25
CR383656.13-201ENST00000550928 RASAL3Q86YV0 1011 aa16.63■□□□□ 0.25
CR383656.13-201ENST00000550928 ZDHHC15Q96MV8 337 aa16.63■□□□□ 0.25
CR383656.13-201ENST00000550928 NEUROD6Q96NK8 337 aa16.63■□□□□ 0.25
CR383656.13-201ENST00000550928 CSRNP1Q96S65 589 aa16.63■□□□□ 0.25
CR383656.13-201ENST00000550928 C1orf115Q9H7X2 142 aa16.63■□□□□ 0.25
CR383656.13-201ENST00000550928 RCAN3Q9UKA8 241 aa16.63■□□□□ 0.25
CR383656.13-201ENST00000550928 MAST3O60307 1309 aa16.63■□□□□ 0.25
CR383656.13-201ENST00000550928 TCP10L2B9ZVM9 353 aa16.62■□□□□ 0.25
CR383656.13-201ENST00000550928 PPP1R12BO60237 982 aaPredicted RBP16.62■□□□□ 0.25
CR383656.13-201ENST00000550928 KCNA4P22459 653 aa16.62■□□□□ 0.25
CR383656.13-201ENST00000550928 REM2Q8IYK8 340 aaPredicted RBP16.62■□□□□ 0.25
CR383656.13-201ENST00000550928 TNS4Q8IZW8 715 aa16.62■□□□□ 0.25
CR383656.13-201ENST00000550928 ANGEL1Q9UNK9 670 aaKnown RBP16.62■□□□□ 0.25
CR383656.13-201ENST00000550928 FZD1Q9UP38 647 aa16.62■□□□□ 0.25
CR383656.13-201ENST00000550928 SALL1Q9NSC2 1324 aa16.62■□□□□ 0.25
CR383656.13-201ENST00000550928 ARAP2Q8WZ64 1704 aa16.62■□□□□ 0.25
CR383656.13-201ENST00000550928 USP2O75604 605 aaPredicted RBP16.61■□□□□ 0.25
CR383656.13-201ENST00000550928 SURF6O75683 361 aaKnown RBP16.61■□□□□ 0.25
CR383656.13-201ENST00000550928 LDHBP07195 334 aaKnown RBP16.61■□□□□ 0.25
CR383656.13-201ENST00000550928 TNNI2P48788 182 aa16.61■□□□□ 0.25
CR383656.13-201ENST00000550928 MVPQ14764 893 aaKnown RBP16.61■□□□□ 0.25
CR383656.13-201ENST00000550928 NOP58Q9Y2X3 529 aaKnown RBP16.61■□□□□ 0.25
CR383656.13-201ENST00000550928 MYH13Q9UKX3 1938 aa16.6■□□□□ 0.25
CR383656.13-201ENST00000550928 UNCXA6NJT0 531 aa16.6■□□□□ 0.25
CR383656.13-201ENST00000550928 PRDX5P30044 214 aa16.6■□□□□ 0.25
CR383656.13-201ENST00000550928 FKBP1CQ5VVH2 108 aa16.6■□□□□ 0.25
CR383656.13-201ENST00000550928 SLC10A4Q96EP9 437 aa16.6■□□□□ 0.25
CR383656.13-201ENST00000550928 TEPSINQ96N21 525 aa16.6■□□□□ 0.25
CR383656.13-201ENST00000550928 GPR108Q9NPR9 543 aa16.6■□□□□ 0.25
CR383656.13-201ENST00000550928 RASGRF1Q13972 1273 aa16.59■□□□□ 0.25
CR383656.13-201ENST00000550928 GORABQ5T7V8 394 aa16.59■□□□□ 0.25
CR383656.13-201ENST00000550928 ZGPATQ8N5A5 531 aaKnown RBP16.59■□□□□ 0.25
CR383656.13-201ENST00000550928 TMEM39BQ9GZU3 492 aa16.59■□□□□ 0.25
CR383656.13-201ENST00000550928 TSKSQ9UJT2 592 aa16.59■□□□□ 0.25
CR383656.13-201ENST00000550928 PDS5AQ29RF7 1337 aaKnown RBP16.59■□□□□ 0.25
CR383656.13-201ENST00000550928 CACNB3P54284 484 aa16.58■□□□□ 0.24
CR383656.13-201ENST00000550928 OS9Q13438 667 aaPredicted RBP16.58■□□□□ 0.24
CR383656.13-201ENST00000550928 DIXDC1Q155Q3 683 aa16.58■□□□□ 0.24
CR383656.13-201ENST00000550928 CEP85Q6P2H3 762 aa16.58■□□□□ 0.24
CR383656.13-201ENST00000550928 FAM83AQ86UY5 434 aa16.58■□□□□ 0.24
CR383656.13-201ENST00000550928 RNF186Q9NXI6 227 aa16.58■□□□□ 0.24
CR383656.13-201ENST00000550928 TMOD2Q9NZR1 351 aa16.58■□□□□ 0.24
CR383656.13-201ENST00000550928 COG6Q9Y2V7 657 aa16.58■□□□□ 0.24
CR383656.13-201ENST00000550928 DAGLAQ9Y4D2 1042 aa16.58■□□□□ 0.24
CR383656.13-201ENST00000550928 SSC5DA1L4H1 1573 aa16.57■□□□□ 0.24
CR383656.13-201ENST00000550928 TRPA1O75762 1119 aa16.57■□□□□ 0.24
CR383656.13-201ENST00000550928 IREB2P48200 963 aaKnown RBP16.57■□□□□ 0.24
CR383656.13-201ENST00000550928 TM4SF4P48230 202 aa16.57■□□□□ 0.24
CR383656.13-201ENST00000550928 TNNI3KQ59H18 835 aa16.57■□□□□ 0.24
CR383656.13-201ENST00000550928 SPTY2D1Q68D10 685 aaPredicted RBP16.57■□□□□ 0.24
CR383656.13-201ENST00000550928 SAGE1Q9NXZ1 904 aa16.57■□□□□ 0.24
CR383656.13-201ENST00000550928 HMG20BQ9P0W2 317 aa16.57■□□□□ 0.24
CR383656.13-201ENST00000550928 ABCF2Q9UG63 623 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms