RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 SMC1BQ8NDV3 1235 aa16.43■□□□□ 0.22
ERBB3-215ENST00000550828 GJA3Q9Y6H8 435 aa16.43■□□□□ 0.22
ERBB3-215ENST00000550828 POLR2AP24928 1970 aaKnown RBP16.43■□□□□ 0.22
ERBB3-215ENST00000550828 FOCADQ5VW36 1801 aa16.42■□□□□ 0.22
ERBB3-215ENST00000550828 CAPN15O75808 1086 aa16.42■□□□□ 0.22
ERBB3-215ENST00000550828 GMPSP49915 693 aaPredicted RBP16.42■□□□□ 0.22
ERBB3-215ENST00000550828 TBC1D22AQ8WUA7 517 aa16.42■□□□□ 0.22
ERBB3-215ENST00000550828 ABCF2Q9UG63 623 aa16.42■□□□□ 0.22
ERBB3-215ENST00000550828 SDSP20132 328 aa16.41■□□□□ 0.22
ERBB3-215ENST00000550828 SCNN1DP51172 638 aa16.41■□□□□ 0.22
ERBB3-215ENST00000550828 HTRA3P83110 453 aa16.41■□□□□ 0.22
ERBB3-215ENST00000550828 TNIP1Q15025 636 aa16.41■□□□□ 0.22
ERBB3-215ENST00000550828 KIAA0825Q8IV33 1275 aa16.41■□□□□ 0.22
ERBB3-215ENST00000550828 GPC2Q8N158 579 aa16.41■□□□□ 0.22
ERBB3-215ENST00000550828 PCDHAC2Q9Y5I4 1007 aa16.41■□□□□ 0.22
ERBB3-215ENST00000550828 F8W031 263 aaPredicted RBP16.4■□□□□ 0.22
ERBB3-215ENST00000550828 KBTBD3Q8NAB2 608 aa16.4■□□□□ 0.22
ERBB3-215ENST00000550828 TCRBV5S4A2TA0A5A2 114 aa16.39■□□□□ 0.21
ERBB3-215ENST00000550828 GLTPD2A6NH11 291 aa16.39■□□□□ 0.21
ERBB3-215ENST00000550828 IDH1O75874 414 aaKnown RBP16.39■□□□□ 0.21
ERBB3-215ENST00000550828 EGFRP00533 1210 aa16.39■□□□□ 0.21
ERBB3-215ENST00000550828 LDHBP07195 334 aaKnown RBP16.39■□□□□ 0.21
ERBB3-215ENST00000550828 MECOMQ03112 1051 aa16.39■□□□□ 0.21
ERBB3-215ENST00000550828 DIXDC1Q155Q3 683 aa16.39■□□□□ 0.21
ERBB3-215ENST00000550828 ADGRA1Q86SQ6 560 aa16.39■□□□□ 0.21
ERBB3-215ENST00000550828 AGBL3Q8NEM8 1001 aa16.39■□□□□ 0.21
ERBB3-215ENST00000550828 NSUN4Q96CB9 384 aaKnown RBP16.39■□□□□ 0.21
ERBB3-215ENST00000550828 TTF2Q9UNY4 1162 aaKnown RBP16.39■□□□□ 0.21
ERBB3-215ENST00000550828 SUGT1Q9Y2Z0 365 aa16.39■□□□□ 0.21
ERBB3-215ENST00000550828 MYO3BQ8WXR4 1341 aa16.39■□□□□ 0.21
ERBB3-215ENST00000550828 PDE6AP16499 860 aa16.38■□□□□ 0.21
ERBB3-215ENST00000550828 BMP2KLQ5H9B9 411 aa16.38■□□□□ 0.21
ERBB3-215ENST00000550828 ERICH6Q7L0X2 663 aa16.38■□□□□ 0.21
ERBB3-215ENST00000550828 ZGPATQ8N5A5 531 aaKnown RBP16.38■□□□□ 0.21
ERBB3-215ENST00000550828 EVI5LQ96CN4 794 aa16.38■□□□□ 0.21
ERBB3-215ENST00000550828 L3MBTL3Q96JM7 780 aaPredicted RBP16.38■□□□□ 0.21
ERBB3-215ENST00000550828 RRAGCQ9HB90 399 aa16.38■□□□□ 0.21
ERBB3-215ENST00000550828 RAI14Q9P0K7 980 aa16.38■□□□□ 0.21
ERBB3-215ENST00000550828 LRP2BPQ9P2M1 347 aa16.38■□□□□ 0.21
ERBB3-215ENST00000550828 BAZ2AQ9UIF9 1905 aaKnown RBP16.37■□□□□ 0.21
ERBB3-215ENST00000550828 TRIM6-TRIM34B2RNG4 842 aa16.37■□□□□ 0.21
ERBB3-215ENST00000550828 POTECB2RU33 542 aa16.37■□□□□ 0.21
ERBB3-215ENST00000550828 RPS12P25398 132 aaKnown RBP16.37■□□□□ 0.21
ERBB3-215ENST00000550828 ADD2P35612 726 aa16.37■□□□□ 0.21
ERBB3-215ENST00000550828 EPS15P42566 896 aa16.37■□□□□ 0.21
ERBB3-215ENST00000550828 ZNF280AP59817 542 aaPredicted RBP16.37■□□□□ 0.21
ERBB3-215ENST00000550828 TTF1Q15361 905 aaPredicted RBP16.37■□□□□ 0.21
ERBB3-215ENST00000550828 MICALL2Q8IY33 904 aa16.37■□□□□ 0.21
ERBB3-215ENST00000550828 MAGEB6Q8N7X4 407 aa16.37■□□□□ 0.21
ERBB3-215ENST00000550828 DPF2Q92785 391 aa16.37■□□□□ 0.21
ERBB3-215ENST00000550828 RILPL2Q969X0 211 aa16.37■□□□□ 0.21
ERBB3-215ENST00000550828 GPRC5DQ9NZD1 345 aa16.37■□□□□ 0.21
ERBB3-215ENST00000550828 RFX7Q2KHR2 1363 aa16.37■□□□□ 0.21
ERBB3-215ENST00000550828 DDX60LQ5H9U9 1706 aaKnown RBP16.36■□□□□ 0.21
ERBB3-215ENST00000550828 USP17L8P0C7I0 530 aa16.36■□□□□ 0.21
ERBB3-215ENST00000550828 SPTY2D1Q68D10 685 aaPredicted RBP16.36■□□□□ 0.21
ERBB3-215ENST00000550828 DZIP1Q86YF9 867 aaKnown RBP16.36■□□□□ 0.21
ERBB3-215ENST00000550828 CNTROBQ8N137 903 aa16.36■□□□□ 0.21
ERBB3-215ENST00000550828 FSD1Q9BTV5 496 aa16.36■□□□□ 0.21
ERBB3-215ENST00000550828 DAGLAQ9Y4D2 1042 aa16.36■□□□□ 0.21
ERBB3-215ENST00000550828 GAKO14976 1311 aa16.36■□□□□ 0.21
ERBB3-215ENST00000550828 NAV1Q8NEY1 1877 aa16.35■□□□□ 0.21
ERBB3-215ENST00000550828 CRKP46108 304 aa16.35■□□□□ 0.21
ERBB3-215ENST00000550828 SLC9C2Q5TAH2 1124 aa16.35■□□□□ 0.21
ERBB3-215ENST00000550828 TRPM4Q8TD43 1214 aa16.35■□□□□ 0.21
ERBB3-215ENST00000550828 ZBED3Q96IU2 234 aaPredicted RBP16.35■□□□□ 0.21
ERBB3-215ENST00000550828 CNOT7Q9UIV1 285 aaKnown RBP16.35■□□□□ 0.21
ERBB3-215ENST00000550828 MROH7-TTC4A0A0A0MT08 1334 aa16.35■□□□□ 0.21
ERBB3-215ENST00000550828 ZNF532Q9HCE3 1301 aa16.35■□□□□ 0.21
ERBB3-215ENST00000550828 MYH1P12882 1939 aa16.35■□□□□ 0.21
ERBB3-215ENST00000550828 HSPA1AP0DMV8 641 aaKnown RBP16.34■□□□□ 0.21
ERBB3-215ENST00000550828 HSPA1BP0DMV9 641 aaKnown RBP16.34■□□□□ 0.21
ERBB3-215ENST00000550828 CYP7A1P22680 504 aa16.34■□□□□ 0.21
ERBB3-215ENST00000550828 MAP3K12Q12852 859 aa16.34■□□□□ 0.21
ERBB3-215ENST00000550828 NAA16Q6N069 864 aaPredicted RBP16.34■□□□□ 0.21
ERBB3-215ENST00000550828 SAMD7Q7Z3H4 446 aa16.34■□□□□ 0.21
ERBB3-215ENST00000550828 FAM227BQ96M60 508 aa16.34■□□□□ 0.21
ERBB3-215ENST00000550828 IL25Q9H293 177 aa16.34■□□□□ 0.21
ERBB3-215ENST00000550828 ASTN2O75129 1339 aaPredicted RBP16.34■□□□□ 0.21
ERBB3-215ENST00000550828 A0A0D9SFI3 127 aa16.33■□□□□ 0.2
ERBB3-215ENST00000550828 RNF113AO15541 343 aaKnown RBP16.33■□□□□ 0.2
ERBB3-215ENST00000550828 VEGFAP15692 232 aaPredicted RBP16.33■□□□□ 0.2
ERBB3-215ENST00000550828 HIRAP54198 1017 aaPredicted RBP16.33■□□□□ 0.2
ERBB3-215ENST00000550828 HDLBPQ00341 1268 aaKnown RBP16.33■□□□□ 0.2
ERBB3-215ENST00000550828 NMIQ13287 307 aaPredicted RBP16.33■□□□□ 0.2
ERBB3-215ENST00000550828 CFAP100Q494V2 611 aa16.33■□□□□ 0.2
ERBB3-215ENST00000550828 ZMYM1Q5SVZ6 1142 aa16.33■□□□□ 0.2
ERBB3-215ENST00000550828 APOBEC3HQ6NTF7 200 aaKnown RBP16.33■□□□□ 0.2
ERBB3-215ENST00000550828 DPY19L2Q6NUT2 758 aa16.33■□□□□ 0.2
ERBB3-215ENST00000550828 OSBP2Q969R2 916 aa16.33■□□□□ 0.2
ERBB3-215ENST00000550828 FAM163AQ96GL9 167 aaPredicted RBP16.33■□□□□ 0.2
ERBB3-215ENST00000550828 SEC62Q99442 399 aaKnown RBP16.33■□□□□ 0.2
ERBB3-215ENST00000550828 SERPINA10Q9UK55 444 aa16.33■□□□□ 0.2
ERBB3-215ENST00000550828 MAST3O60307 1309 aa16.33■□□□□ 0.2
ERBB3-215ENST00000550828 M0R2C6 588 aa16.32■□□□□ 0.2
ERBB3-215ENST00000550828 SIPA1L1O43166 1804 aa16.32■□□□□ 0.2
ERBB3-215ENST00000550828 CHMLP26374 656 aa16.32■□□□□ 0.2
ERBB3-215ENST00000550828 DYNLL1P63167 89 aaKnown RBP16.32■□□□□ 0.2
ERBB3-215ENST00000550828 UBE3CQ15386 1083 aa16.32■□□□□ 0.2
ERBB3-215ENST00000550828 TBC1D10BQ4KMP7 808 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms