RNA–Protein interactions for RNA: ENST00000550808.5

MTA1-218, Transcript of metastasis associated 1, human

TSL 5

Gene MTA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MTA1-218	ENST00000550808	TNFAIP1	Q13829	316 aa		28.91	■■■□□ 2.22
MTA1-218	ENST00000550808	MAP3K11	Q16584	847 aa		28.91	■■■□□ 2.22
MTA1-218	ENST00000550808	LRRFIP2	Q9Y608	721 aa	Known RBP	28.91	■■■□□ 2.22
MTA1-218	ENST00000550808	OTOF	Q9HC10	1997 aa		28.9	■■■□□ 2.22
MTA1-218	ENST00000550808	TCP10L2	B9ZVM9	353 aa		28.9	■■■□□ 2.22
MTA1-218	ENST00000550808	SLC5A1	P13866	664 aa		28.9	■■■□□ 2.22
MTA1-218	ENST00000550808	ATG9A	Q7Z3C6	839 aa		28.9	■■■□□ 2.22
MTA1-218	ENST00000550808	KIF16B	Q96L93	1317 aa		28.89	■■■□□ 2.21
MTA1-218	ENST00000550808	USP2	O75604	605 aa	Predicted RBP	28.88	■■■□□ 2.21
MTA1-218	ENST00000550808	IREB2	P48200	963 aa	Known RBP	28.88	■■■□□ 2.21
MTA1-218	ENST00000550808	LPIN2	Q92539	896 aa		28.88	■■■□□ 2.21
MTA1-218	ENST00000550808	MEIS3	Q99687	375 aa		28.88	■■■□□ 2.21
MTA1-218	ENST00000550808	CDAN1	Q8IWY9	1227 aa		28.87	■■■□□ 2.21
MTA1-218	ENST00000550808	TEKT1	Q969V4	418 aa		28.87	■■■□□ 2.21
MTA1-218	ENST00000550808	WNK4	Q96J92	1243 aa		28.87	■■■□□ 2.21
MTA1-218	ENST00000550808	CTU1	Q7Z7A3	348 aa	Known RBP	28.86	■■■□□ 2.21
MTA1-218	ENST00000550808	TMEM39B	Q9GZU3	492 aa		28.86	■■■□□ 2.21
MTA1-218	ENST00000550808	CACNB3	P54284	484 aa		28.85	■■■□□ 2.21
MTA1-218	ENST00000550808	HDLBP	Q00341	1268 aa	Known RBP	28.85	■■■□□ 2.21
MTA1-218	ENST00000550808	ZNF296	Q8WUU4	475 aa	Predicted RBP	28.85	■■■□□ 2.21
MTA1-218	ENST00000550808	TEPSIN	Q96N21	525 aa		28.85	■■■□□ 2.21
MTA1-218	ENST00000550808	CEP126	Q9P2H0	1117 aa		28.85	■■■□□ 2.21
MTA1-218	ENST00000550808	PA2G4	Q9UQ80	394 aa	Known RBP	28.85	■■■□□ 2.21
MTA1-218	ENST00000550808	HDAC5	Q9UQL6	1122 aa		28.85	■■■□□ 2.21
MTA1-218	ENST00000550808	LAMB1	P07942	1786 aa		28.85	■■■□□ 2.21
MTA1-218	ENST00000550808	CIAO1	O76071	339 aa		28.84	■■■□□ 2.21
MTA1-218	ENST00000550808	TNNI2	P48788	182 aa		28.84	■■■□□ 2.21
MTA1-218	ENST00000550808	ATP2B3	Q16720	1220 aa		28.84	■■■□□ 2.21
MTA1-218	ENST00000550808	MANSC4	A6NHS7	340 aa	Predicted RBP	28.83	■■■□□ 2.21
MTA1-218	ENST00000550808	ZBTB48	P10074	688 aa	Predicted RBP	28.83	■■■□□ 2.21
MTA1-218	ENST00000550808	ANKRD13A	Q8IZ07	590 aa		28.83	■■■□□ 2.21
MTA1-218	ENST00000550808	ARHGAP45	Q92619	1136 aa		28.83	■■■□□ 2.21
MTA1-218	ENST00000550808	R3HDML	Q9H3Y0	253 aa		28.83	■■■□□ 2.21
MTA1-218	ENST00000550808	FBXO3	Q9UK99	471 aa		28.83	■■■□□ 2.21
MTA1-218	ENST00000550808	UNCX	A6NJT0	531 aa		28.82	■■■□□ 2.2
MTA1-218	ENST00000550808	GPR25	O00155	361 aa		28.82	■■■□□ 2.2
MTA1-218	ENST00000550808	INTS3	Q68E01	1043 aa	Known RBP	28.82	■■■□□ 2.2
MTA1-218	ENST00000550808	MAST3	O60307	1309 aa		28.82	■■■□□ 2.2
MTA1-218	ENST00000550808	ZDHHC15	Q96MV8	337 aa		28.81	■■■□□ 2.2
MTA1-218	ENST00000550808	ELP3	Q9H9T3	547 aa		28.81	■■■□□ 2.2
MTA1-218	ENST00000550808	SUGT1	Q9Y2Z0	365 aa		28.81	■■■□□ 2.2
MTA1-218	ENST00000550808	GJA5	P36382	358 aa		28.8	■■■□□ 2.2
MTA1-218	ENST00000550808	IL15	P40933	162 aa	Predicted RBP	28.8	■■■□□ 2.2
MTA1-218	ENST00000550808	IFNL1	Q8IU54	200 aa		28.8	■■■□□ 2.2
MTA1-218	ENST00000550808	WDR66	Q8TBY9	1149 aa		28.8	■■■□□ 2.2
MTA1-218	ENST00000550808	FRAT1	Q92837	279 aa	Predicted RBP	28.8	■■■□□ 2.2
MTA1-218	ENST00000550808	TMOD2	Q9NZR1	351 aa		28.8	■■■□□ 2.2
MTA1-218	ENST00000550808	INHBE	P58166	350 aa		28.79	■■■□□ 2.2
MTA1-218	ENST00000550808	APOBEC3H	Q6NTF7	200 aa	Known RBP	28.79	■■■□□ 2.2
MTA1-218	ENST00000550808	MRI	Q9BWK5	157 aa		28.79	■■■□□ 2.2
MTA1-218	ENST00000550808	TNN	Q9UQP3	1299 aa		28.79	■■■□□ 2.2
MTA1-218	ENST00000550808	BCAR3	O75815	825 aa		28.78	■■■□□ 2.2
MTA1-218	ENST00000550808	ALDH1A1	P00352	501 aa		28.78	■■■□□ 2.2
MTA1-218	ENST00000550808	GNAI3	P08754	354 aa		28.78	■■■□□ 2.2
MTA1-218	ENST00000550808	COPRS	Q9NQ92	184 aa		28.78	■■■□□ 2.2
MTA1-218	ENST00000550808	GNL3L	Q9NVN8	582 aa	Known RBP	28.78	■■■□□ 2.2
MTA1-218	ENST00000550808	AK9	Q5TCS8	1911 aa		28.77	■■■□□ 2.2
MTA1-218	ENST00000550808	IGF2BP3	O00425	579 aa	Known RBP eCLIP	28.77	■■■□□ 2.2
MTA1-218	ENST00000550808	IPO8	O15397	1037 aa	Known RBP	28.77	■■■□□ 2.2
MTA1-218	ENST00000550808	RGS19	P49795	217 aa		28.77	■■■□□ 2.2
MTA1-218	ENST00000550808	MLLT1	Q03111	559 aa	Predicted RBP	28.77	■■■□□ 2.2
MTA1-218	ENST00000550808	HHIPL2	Q6UWX4	724 aa		28.77	■■■□□ 2.2
MTA1-218	ENST00000550808	OPTN	Q96CV9	577 aa		28.77	■■■□□ 2.2
MTA1-218	ENST00000550808	CFHR5	Q9BXR6	569 aa		28.77	■■■□□ 2.2
MTA1-218	ENST00000550808	FKTN	O75072	461 aa		28.76	■■■□□ 2.19
MTA1-218	ENST00000550808	TRIM27	P14373	513 aa		28.76	■■■□□ 2.19
MTA1-218	ENST00000550808	ADORA1	P30542	326 aa		28.76	■■■□□ 2.19
MTA1-218	ENST00000550808	PHKA1	P46020	1223 aa		28.76	■■■□□ 2.19
MTA1-218	ENST00000550808	NOM1	Q5C9Z4	860 aa	Known RBP	28.76	■■■□□ 2.19
MTA1-218	ENST00000550808	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	28.76	■■■□□ 2.19
MTA1-218	ENST00000550808	MIER1	Q8N108	512 aa		28.76	■■■□□ 2.19
MTA1-218	ENST00000550808	SRGAP3	O43295	1099 aa		28.75	■■■□□ 2.19
MTA1-218	ENST00000550808	DIXDC1	Q155Q3	683 aa		28.75	■■■□□ 2.19
MTA1-218	ENST00000550808	CNKSR2	Q8WXI2	1034 aa		28.75	■■■□□ 2.19
MTA1-218	ENST00000550808	CLUAP1	Q96AJ1	413 aa		28.75	■■■□□ 2.19
MTA1-218	ENST00000550808	PRDX5	P30044	214 aa		28.74	■■■□□ 2.19
MTA1-218	ENST00000550808	MAP3K9	P80192	1104 aa		28.74	■■■□□ 2.19
MTA1-218	ENST00000550808	VGLL4	Q14135	290 aa		28.74	■■■□□ 2.19
MTA1-218	ENST00000550808	ATF7IP	Q6VMQ6	1270 aa		28.74	■■■□□ 2.19
MTA1-218	ENST00000550808	SOX10	P56693	466 aa		28.73	■■■□□ 2.19
MTA1-218	ENST00000550808	FAM83A	Q86UY5	434 aa		28.73	■■■□□ 2.19
MTA1-218	ENST00000550808	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	28.73	■■■□□ 2.19
MTA1-218	ENST00000550808	HPS5	Q9UPZ3	1129 aa		28.73	■■■□□ 2.19
MTA1-218	ENST00000550808	DAGLA	Q9Y4D2	1042 aa		28.73	■■■□□ 2.19
MTA1-218	ENST00000550808	MYH2	Q9UKX2	1941 aa		28.73	■■■□□ 2.19
MTA1-218	ENST00000550808	LDHB	P07195	334 aa	Known RBP	28.72	■■■□□ 2.19
MTA1-218	ENST00000550808	TIMM10	P62072	90 aa		28.72	■■■□□ 2.19
MTA1-218	ENST00000550808	HNRNPU	Q00839	825 aa	Known RBP eCLIP	28.72	■■■□□ 2.19
MTA1-218	ENST00000550808	PKN2	Q16513	984 aa	Known RBP	28.72	■■■□□ 2.19
MTA1-218	ENST00000550808	FKBP1C	Q5VVH2	108 aa		28.72	■■■□□ 2.19
MTA1-218	ENST00000550808	DENND2A	Q9ULE3	1009 aa		28.72	■■■□□ 2.19
MTA1-218	ENST00000550808	CSAD	Q9Y600	493 aa		28.72	■■■□□ 2.19
MTA1-218	ENST00000550808	CCDC102B	Q68D86	513 aa		28.71	■■■□□ 2.19
MTA1-218	ENST00000550808	OTUD7B	Q6GQQ9	843 aa		28.71	■■■□□ 2.19
MTA1-218	ENST00000550808	PTPN18	Q99952	460 aa		28.71	■■■□□ 2.19
MTA1-218	ENST00000550808	SEMA3E	O15041	775 aa		28.7	■■■□□ 2.18
MTA1-218	ENST00000550808	TFCP2	Q12800	502 aa		28.7	■■■□□ 2.18
MTA1-218	ENST00000550808	MTX1	Q13505	466 aa		28.7	■■■□□ 2.18
MTA1-218	ENST00000550808	CRHR2	Q13324	411 aa		28.69	■■■□□ 2.18
MTA1-218	ENST00000550808	CDC42EP5	Q6NZY7	148 aa		28.69	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms