RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 MFSD14BQ5SR56 506 aa19.1■□□□□ 0.65
SVOP-203ENST00000550436 TMEM39BQ9GZU3 492 aa19.1■□□□□ 0.65
SVOP-203ENST00000550436 SPINK5Q9NQ38 1064 aaPredicted RBP19.1■□□□□ 0.65
SVOP-203ENST00000550436 IQSEC3Q9UPP2 1182 aaPredicted RBP19.1■□□□□ 0.65
SVOP-203ENST00000550436 UNCXA6NJT0 531 aa19.09■□□□□ 0.65
SVOP-203ENST00000550436 MYCP01106 439 aaPredicted RBP19.09■□□□□ 0.65
SVOP-203ENST00000550436 CCDC57Q2TAC2 916 aa19.09■□□□□ 0.65
SVOP-203ENST00000550436 TAF7LQ5H9L4 462 aa19.09■□□□□ 0.65
SVOP-203ENST00000550436 OTUD7BQ6GQQ9 843 aa19.09■□□□□ 0.65
SVOP-203ENST00000550436 DZIP1LQ8IYY4 767 aaKnown RBP19.09■□□□□ 0.65
SVOP-203ENST00000550436 FAM84BQ96KN1 310 aaPredicted RBP19.09■□□□□ 0.65
SVOP-203ENST00000550436 CACNB3P54284 484 aa19.08■□□□□ 0.64
SVOP-203ENST00000550436 FAM43AQ8N2R8 423 aa19.08■□□□□ 0.64
SVOP-203ENST00000550436 PTCH2Q9Y6C5 1203 aa19.08■□□□□ 0.64
SVOP-203ENST00000550436 CCL15-CCL14A0A0B4J2E2 113 aa19.07■□□□□ 0.64
SVOP-203ENST00000550436 GRM8O00222 908 aa19.07■□□□□ 0.64
SVOP-203ENST00000550436 HIBADHP31937 336 aaKnown RBP19.07■□□□□ 0.64
SVOP-203ENST00000550436 CRKP46108 304 aa19.07■□□□□ 0.64
SVOP-203ENST00000550436 VGLL4Q14135 290 aa19.07■□□□□ 0.64
SVOP-203ENST00000550436 CCL15Q16663 113 aa19.07■□□□□ 0.64
SVOP-203ENST00000550436 GCC1Q96CN9 775 aa19.07■□□□□ 0.64
SVOP-203ENST00000550436 KAZALD1Q96I82 304 aa19.07■□□□□ 0.64
SVOP-203ENST00000550436 ARAP2Q8WZ64 1704 aa19.07■□□□□ 0.64
SVOP-203ENST00000550436 ECM2O94769 699 aaPredicted RBP19.06■□□□□ 0.64
SVOP-203ENST00000550436 MAP3K9P80192 1104 aa19.06■□□□□ 0.64
SVOP-203ENST00000550436 TAF1CQ15572 869 aaPredicted RBP19.06■□□□□ 0.64
SVOP-203ENST00000550436 NCBP3Q53F19 620 aaKnown RBP19.06■□□□□ 0.64
SVOP-203ENST00000550436 OTUD5Q96G74 571 aa19.06■□□□□ 0.64
SVOP-203ENST00000550436 SUCLG2Q96I99 432 aa19.06■□□□□ 0.64
SVOP-203ENST00000550436 ZNF333Q96JL9 665 aa19.06■□□□□ 0.64
SVOP-203ENST00000550436 ARHGAP39Q9C0H5 1083 aa19.06■□□□□ 0.64
SVOP-203ENST00000550436 SERPINA10Q9UK55 444 aa19.06■□□□□ 0.64
SVOP-203ENST00000550436 TRIOBPQ9H2D6 2365 aa19.06■□□□□ 0.64
SVOP-203ENST00000550436 CHAF1AQ13111 956 aaPredicted RBP19.05■□□□□ 0.64
SVOP-203ENST00000550436 UBE4AQ14139 1066 aa19.05■□□□□ 0.64
SVOP-203ENST00000550436 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.05■□□□□ 0.64
SVOP-203ENST00000550436 BRCA2P51587 3418 aa19.04■□□□□ 0.64
SVOP-203ENST00000550436 TNFAIP1Q13829 316 aa19.04■□□□□ 0.64
SVOP-203ENST00000550436 SLC4A10Q6U841 1118 aa19.04■□□□□ 0.64
SVOP-203ENST00000550436 C9orf78Q9NZ63 289 aaPredicted RBP19.04■□□□□ 0.64
SVOP-203ENST00000550436 ZFYVE28Q9HCC9 887 aa19.03■□□□□ 0.64
SVOP-203ENST00000550436 RIPOR2Q9Y4F9 1068 aa19.03■□□□□ 0.64
SVOP-203ENST00000550436 CCER2I3L3R5 266 aa19.02■□□□□ 0.64
SVOP-203ENST00000550436 NBPF7P0C2Y1 421 aaPredicted RBP19.02■□□□□ 0.64
SVOP-203ENST00000550436 FXR1P51114 621 aaKnown RBP eCLIP19.02■□□□□ 0.64
SVOP-203ENST00000550436 LRRC24Q50LG9 513 aa19.02■□□□□ 0.64
SVOP-203ENST00000550436 FBXO33Q7Z6M2 555 aa19.02■□□□□ 0.64
SVOP-203ENST00000550436 SH3TC2Q8TF17 1288 aa19.02■□□□□ 0.64
SVOP-203ENST00000550436 ZKSCAN4Q969J2 545 aaPredicted RBP19.02■□□□□ 0.64
SVOP-203ENST00000550436 TMEM106CQ9BVX2 250 aa19.02■□□□□ 0.64
SVOP-203ENST00000550436 SNCAIPQ9Y6H5 919 aa19.02■□□□□ 0.64
SVOP-203ENST00000550436 GTF2A2P52657 109 aa19.01■□□□□ 0.63
SVOP-203ENST00000550436 SLC9C1Q4G0N8 1177 aa19.01■□□□□ 0.63
SVOP-203ENST00000550436 DIEXFQ68CQ4 756 aaKnown RBP19.01■□□□□ 0.63
SVOP-203ENST00000550436 WDR63Q8IWG1 891 aa19.01■□□□□ 0.63
SVOP-203ENST00000550436 COLQQ9Y215 455 aaPredicted RBP19.01■□□□□ 0.63
SVOP-203ENST00000550436 SPDYE5A6NIY4 337 aa19■□□□□ 0.63
SVOP-203ENST00000550436 BTBD19C9JJ37 291 aa19■□□□□ 0.63
SVOP-203ENST00000550436 SRCIN1Q9C0H9 1055 aa19■□□□□ 0.63
SVOP-203ENST00000550436 CSADQ9Y600 493 aa19■□□□□ 0.63
SVOP-203ENST00000550436 ALDH1L1O75891 902 aa18.99■□□□□ 0.63
SVOP-203ENST00000550436 CTGFP29279 349 aa18.99■□□□□ 0.63
SVOP-203ENST00000550436 TNNI2P48788 182 aa18.99■□□□□ 0.63
SVOP-203ENST00000550436 SLC4A8Q2Y0W8 1093 aa18.99■□□□□ 0.63
SVOP-203ENST00000550436 KLHDC4Q8TBB5 520 aa18.99■□□□□ 0.63
SVOP-203ENST00000550436 IRF6O14896 467 aa18.98■□□□□ 0.63
SVOP-203ENST00000550436 BCAMP50895 628 aa18.98■□□□□ 0.63
SVOP-203ENST00000550436 ANKRD44Q8N8A2 993 aa18.98■□□□□ 0.63
SVOP-203ENST00000550436 WRNIP1Q96S55 665 aa18.98■□□□□ 0.63
SVOP-203ENST00000550436 BICC1Q9H694 974 aaKnown RBP18.98■□□□□ 0.63
SVOP-203ENST00000550436 TLR2O60603 784 aa18.97■□□□□ 0.63
SVOP-203ENST00000550436 APOBEC3HQ6NTF7 200 aaKnown RBP18.97■□□□□ 0.63
SVOP-203ENST00000550436 MIGA2Q7L4E1 593 aa18.97■□□□□ 0.63
SVOP-203ENST00000550436 VPS37DQ86XT2 251 aa18.97■□□□□ 0.63
SVOP-203ENST00000550436 VGLL2Q8N8G2 317 aa18.97■□□□□ 0.63
SVOP-203ENST00000550436 H0YGN5 161 aa18.96■□□□□ 0.63
SVOP-203ENST00000550436 INPP5BP32019 993 aa18.96■□□□□ 0.63
SVOP-203ENST00000550436 LACTBP83111 547 aaPredicted RBP18.96■□□□□ 0.63
SVOP-203ENST00000550436 METTL24Q5JXM2 366 aa18.96■□□□□ 0.63
SVOP-203ENST00000550436 NBPF11Q86T75 865 aa18.96■□□□□ 0.63
SVOP-203ENST00000550436 ERO1BQ86YB8 467 aa18.96■□□□□ 0.63
SVOP-203ENST00000550436 MIER1Q8N108 512 aa18.96■□□□□ 0.63
SVOP-203ENST00000550436 TEKT1Q969V4 418 aa18.96■□□□□ 0.63
SVOP-203ENST00000550436 MROH5Q6ZUA9 1318 aa18.96■□□□□ 0.63
SVOP-203ENST00000550436 FRAT2O75474 233 aaPredicted RBP18.95■□□□□ 0.62
SVOP-203ENST00000550436 CETPP11597 493 aa18.95■□□□□ 0.62
SVOP-203ENST00000550436 HDLBPQ00341 1268 aaKnown RBP18.95■□□□□ 0.62
SVOP-203ENST00000550436 MTFR1Q15390 333 aa18.95■□□□□ 0.62
SVOP-203ENST00000550436 ZDHHC15Q96MV8 337 aa18.95■□□□□ 0.62
SVOP-203ENST00000550436 CPA4Q9UI42 421 aa18.95■□□□□ 0.62
SVOP-203ENST00000550436 AK9Q5TCS8 1911 aa18.95■□□□□ 0.62
SVOP-203ENST00000550436 ZNF521Q96K83 1311 aa18.95■□□□□ 0.62
SVOP-203ENST00000550436 ARHGEF6Q15052 776 aa18.94■□□□□ 0.62
SVOP-203ENST00000550436 RABL6Q3YEC7 729 aaPredicted RBP18.94■□□□□ 0.62
SVOP-203ENST00000550436 UTYO14607 1347 aa18.94■□□□□ 0.62
SVOP-203ENST00000550436 PDE8BO95263 885 aa18.93■□□□□ 0.62
SVOP-203ENST00000550436 PPIL2Q13356 520 aa18.93■□□□□ 0.62
SVOP-203ENST00000550436 SNAPC2Q13487 334 aa18.93■□□□□ 0.62
SVOP-203ENST00000550436 C17orf99Q6UX52 265 aa18.93■□□□□ 0.62
SVOP-203ENST00000550436 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms