RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	CDAN1	Q8IWY9	1227 aa		13.84	□□□□□ -0.19
RAB5B-208	ENST00000550283	EXOC6	Q8TAG9	804 aa		13.84	□□□□□ -0.19
RAB5B-208	ENST00000550283	RHPN1	Q8TCX5	695 aa		13.84	□□□□□ -0.19
RAB5B-208	ENST00000550283	BCL11A	Q9H165	835 aa		13.84	□□□□□ -0.19
RAB5B-208	ENST00000550283	GPR108	Q9NPR9	543 aa		13.84	□□□□□ -0.19
RAB5B-208	ENST00000550283	SNRK	Q9NRH2	765 aa		13.84	□□□□□ -0.19
RAB5B-208	ENST00000550283	AKAP2	Q9Y2D5	859 aa		13.84	□□□□□ -0.19
RAB5B-208	ENST00000550283	MYH13	Q9UKX3	1938 aa		13.84	□□□□□ -0.19
RAB5B-208	ENST00000550283	ARID4A	P29374	1257 aa	Predicted RBP	13.83	□□□□□ -0.2
RAB5B-208	ENST00000550283	CRK	P46108	304 aa		13.83	□□□□□ -0.2
RAB5B-208	ENST00000550283	OGFOD1	Q8N543	542 aa		13.83	□□□□□ -0.2
RAB5B-208	ENST00000550283	MTMR14	Q8NCE2	650 aa		13.83	□□□□□ -0.2
RAB5B-208	ENST00000550283	ZNF408	Q9H9D4	720 aa		13.83	□□□□□ -0.2
RAB5B-208	ENST00000550283	FZD1	Q9UP38	647 aa		13.83	□□□□□ -0.2
RAB5B-208	ENST00000550283	CELF2	O95319	508 aa	Known RBP	13.82	□□□□□ -0.2
RAB5B-208	ENST00000550283	CACNB3	P54284	484 aa		13.82	□□□□□ -0.2
RAB5B-208	ENST00000550283	DLGAP5	Q15398	846 aa		13.82	□□□□□ -0.2
RAB5B-208	ENST00000550283	MOB2	Q70IA6	237 aa		13.82	□□□□□ -0.2
RAB5B-208	ENST00000550283	CDC37L1	Q7L3B6	337 aa		13.82	□□□□□ -0.2
RAB5B-208	ENST00000550283	CDCA5	Q96FF9	252 aa		13.82	□□□□□ -0.2
RAB5B-208	ENST00000550283	TDRD3	Q9H7E2	651 aa	Known RBP	13.82	□□□□□ -0.2
RAB5B-208	ENST00000550283	SSC5D	A1L4H1	1573 aa		13.82	□□□□□ -0.2
RAB5B-208	ENST00000550283	AKAP11	Q9UKA4	1901 aa		13.82	□□□□□ -0.2
RAB5B-208	ENST00000550283	TMEM88B	A6NKF7	163 aa		13.81	□□□□□ -0.2
RAB5B-208	ENST00000550283	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.81	□□□□□ -0.2
RAB5B-208	ENST00000550283	AACS	Q86V21	672 aa		13.81	□□□□□ -0.2
RAB5B-208	ENST00000550283	DCPS	Q96C86	337 aa	Known RBP	13.81	□□□□□ -0.2
RAB5B-208	ENST00000550283	CREBZF	Q9NS37	354 aa		13.81	□□□□□ -0.2
RAB5B-208	ENST00000550283	MKRN1	Q9UHC7	482 aa	Known RBP	13.81	□□□□□ -0.2
RAB5B-208	ENST00000550283	HDAC9	Q9UKV0	1011 aa		13.81	□□□□□ -0.2
RAB5B-208	ENST00000550283	DENND2A	Q9ULE3	1009 aa		13.81	□□□□□ -0.2
RAB5B-208	ENST00000550283	PCNT	O95613	3336 aa		13.8	□□□□□ -0.2
RAB5B-208	ENST00000550283	CYP2E1	P05181	493 aa	Predicted RBP	13.8	□□□□□ -0.2
RAB5B-208	ENST00000550283	ZAP70	P43403	619 aa		13.8	□□□□□ -0.2
RAB5B-208	ENST00000550283	RBM5	P52756	815 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
RAB5B-208	ENST00000550283	SPATA5	Q8NB90	893 aa		13.8	□□□□□ -0.2
RAB5B-208	ENST00000550283	WDR66	Q8TBY9	1149 aa		13.8	□□□□□ -0.2
RAB5B-208	ENST00000550283	TBC1D22A	Q8WUA7	517 aa		13.8	□□□□□ -0.2
RAB5B-208	ENST00000550283	DCTPP1	Q9H773	170 aa		13.8	□□□□□ -0.2
RAB5B-208	ENST00000550283	PIH1D3	Q9NQM4	214 aa	Known RBP	13.8	□□□□□ -0.2
RAB5B-208	ENST00000550283	ZNF70	Q9UC06	446 aa	Predicted RBP	13.8	□□□□□ -0.2
RAB5B-208	ENST00000550283	SERPINA10	Q9UK55	444 aa		13.8	□□□□□ -0.2
RAB5B-208	ENST00000550283	DAGLA	Q9Y4D2	1042 aa		13.8	□□□□□ -0.2
RAB5B-208	ENST00000550283	SALL1	Q9NSC2	1324 aa		13.8	□□□□□ -0.2
RAB5B-208	ENST00000550283	TRPM7	Q96QT4	1865 aa		13.8	□□□□□ -0.2
RAB5B-208	ENST00000550283	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.79	□□□□□ -0.2
RAB5B-208	ENST00000550283	SEMA3E	O15041	775 aa		13.79	□□□□□ -0.2
RAB5B-208	ENST00000550283	HMMR	O75330	724 aa		13.79	□□□□□ -0.2
RAB5B-208	ENST00000550283	SPDYE2	Q495Y8	402 aa		13.79	□□□□□ -0.2
RAB5B-208	ENST00000550283	GORAB	Q5T7V8	394 aa		13.79	□□□□□ -0.2
RAB5B-208	ENST00000550283	SULF1	Q8IWU6	871 aa		13.79	□□□□□ -0.2
RAB5B-208	ENST00000550283	KIF1BP	Q96EK5	621 aa		13.79	□□□□□ -0.2
RAB5B-208	ENST00000550283	ANTXR1	Q9H6X2	564 aa		13.79	□□□□□ -0.2
RAB5B-208	ENST00000550283	GNL3L	Q9NVN8	582 aa	Known RBP	13.79	□□□□□ -0.2
RAB5B-208	ENST00000550283	ABCF2	Q9UG63	623 aa		13.79	□□□□□ -0.2
RAB5B-208	ENST00000550283	PITPNM2	Q9BZ72	1349 aa		13.79	□□□□□ -0.2
RAB5B-208	ENST00000550283	CNTNAP1	P78357	1384 aa		13.79	□□□□□ -0.2
RAB5B-208	ENST00000550283	ECM29	Q5VYK3	1845 aa		13.78	□□□□□ -0.2
RAB5B-208	ENST00000550283	MECOM	Q03112	1051 aa		13.78	□□□□□ -0.2
RAB5B-208	ENST00000550283	TTC39A	Q5SRH9	613 aa		13.78	□□□□□ -0.2
RAB5B-208	ENST00000550283	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.78	□□□□□ -0.2
RAB5B-208	ENST00000550283	EDC3	Q96F86	508 aa	Known RBP	13.78	□□□□□ -0.2
RAB5B-208	ENST00000550283	ZDHHC15	Q96MV8	337 aa		13.78	□□□□□ -0.2
RAB5B-208	ENST00000550283	VEZT	Q9HBM0	779 aa		13.78	□□□□□ -0.2
RAB5B-208	ENST00000550283	PDS5A	Q29RF7	1337 aa	Known RBP	13.78	□□□□□ -0.2
RAB5B-208	ENST00000550283	TCP10L2	B9ZVM9	353 aa		13.77	□□□□□ -0.21
RAB5B-208	ENST00000550283	IGHD	P01880	384 aa		13.77	□□□□□ -0.21
RAB5B-208	ENST00000550283	CHGB	P05060	677 aa		13.77	□□□□□ -0.21
RAB5B-208	ENST00000550283	LDHB	P07195	334 aa	Known RBP	13.77	□□□□□ -0.21
RAB5B-208	ENST00000550283	SLURP2	P0DP57	97 aa		13.77	□□□□□ -0.21
RAB5B-208	ENST00000550283	VEGFB	P49765	207 aa		13.77	□□□□□ -0.21
RAB5B-208	ENST00000550283	NFIA	Q12857	509 aa		13.77	□□□□□ -0.21
RAB5B-208	ENST00000550283	TSHZ3	Q63HK5	1081 aa		13.77	□□□□□ -0.21
RAB5B-208	ENST00000550283	ADGRA1	Q86SQ6	560 aa		13.77	□□□□□ -0.21
RAB5B-208	ENST00000550283	SAPCD2	Q86UD0	394 aa		13.77	□□□□□ -0.21
RAB5B-208	ENST00000550283	ERC1	Q8IUD2	1116 aa		13.77	□□□□□ -0.21
RAB5B-208	ENST00000550283	ZFPM1	Q8IX07	1006 aa		13.77	□□□□□ -0.21
RAB5B-208	ENST00000550283	TEKT1	Q969V4	418 aa		13.77	□□□□□ -0.21
RAB5B-208	ENST00000550283	TEPSIN	Q96N21	525 aa		13.77	□□□□□ -0.21
RAB5B-208	ENST00000550283	ZIC5	Q96T25	663 aa		13.77	□□□□□ -0.21
RAB5B-208	ENST00000550283	DEFB129	Q9H1M3	183 aa		13.77	□□□□□ -0.21
RAB5B-208	ENST00000550283	CHMP4B	Q9H444	224 aa	Known RBP	13.77	□□□□□ -0.21
RAB5B-208	ENST00000550283	ABT1	Q9ULW3	272 aa	Known RBP	13.77	□□□□□ -0.21
RAB5B-208	ENST00000550283	TLL2	Q9Y6L7	1015 aa		13.77	□□□□□ -0.21
RAB5B-208	ENST00000550283	GAK	O14976	1311 aa		13.76	□□□□□ -0.21
RAB5B-208	ENST00000550283	RASSF10	A6NK89	507 aa		13.76	□□□□□ -0.21
RAB5B-208	ENST00000550283	RAB11FIP3	O75154	756 aa		13.76	□□□□□ -0.21
RAB5B-208	ENST00000550283	UQCRFS1P1	P0C7P4	283 aa		13.76	□□□□□ -0.21
RAB5B-208	ENST00000550283	HDLBP	Q00341	1268 aa	Known RBP	13.76	□□□□□ -0.21
RAB5B-208	ENST00000550283	RASA3	Q14644	834 aa		13.76	□□□□□ -0.21
RAB5B-208	ENST00000550283	SLFNL1	Q499Z3	407 aa		13.76	□□□□□ -0.21
RAB5B-208	ENST00000550283	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.76	□□□□□ -0.21
RAB5B-208	ENST00000550283	CYP4F22	Q6NT55	531 aa		13.76	□□□□□ -0.21
RAB5B-208	ENST00000550283	CDC42EP5	Q6NZY7	148 aa		13.76	□□□□□ -0.21
RAB5B-208	ENST00000550283	HHIPL2	Q6UWX4	724 aa		13.76	□□□□□ -0.21
RAB5B-208	ENST00000550283	NSUN4	Q96CB9	384 aa	Known RBP	13.76	□□□□□ -0.21
RAB5B-208	ENST00000550283	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.76	□□□□□ -0.21
RAB5B-208	ENST00000550283	TMEM39B	Q9GZU3	492 aa		13.76	□□□□□ -0.21
RAB5B-208	ENST00000550283	SUGT1	Q9Y2Z0	365 aa		13.76	□□□□□ -0.21
RAB5B-208	ENST00000550283	HSPA1A	P0DMV8	641 aa	Known RBP	13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms