RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 HIBADHP31937 336 aaKnown RBP14.66□□□□□ -0.06
SMARCD1-208ENST00000550280 IREB2P48200 963 aaKnown RBP14.66□□□□□ -0.06
SMARCD1-208ENST00000550280 RABL6Q3YEC7 729 aaPredicted RBP14.66□□□□□ -0.06
SMARCD1-208ENST00000550280 LRRC24Q50LG9 513 aa14.66□□□□□ -0.06
SMARCD1-208ENST00000550280 TAF7LQ5H9L4 462 aa14.66□□□□□ -0.06
SMARCD1-208ENST00000550280 SLC4A10Q6U841 1118 aa14.66□□□□□ -0.06
SMARCD1-208ENST00000550280 FBXO33Q7Z6M2 555 aa14.66□□□□□ -0.06
SMARCD1-208ENST00000550280 ANKRD13AQ8IZ07 590 aa14.66□□□□□ -0.06
SMARCD1-208ENST00000550280 VGLL2Q8N8G2 317 aa14.66□□□□□ -0.06
SMARCD1-208ENST00000550280 BRI3BPQ8WY22 251 aa14.66□□□□□ -0.06
SMARCD1-208ENST00000550280 TMEM39BQ9GZU3 492 aa14.66□□□□□ -0.06
SMARCD1-208ENST00000550280 BICC1Q9H694 974 aaKnown RBP14.66□□□□□ -0.06
SMARCD1-208ENST00000550280 C9orf78Q9NZ63 289 aaPredicted RBP14.66□□□□□ -0.06
SMARCD1-208ENST00000550280 IQSEC3Q9UPP2 1182 aaPredicted RBP14.66□□□□□ -0.06
SMARCD1-208ENST00000550280 TCP10L2B9ZVM9 353 aa14.65□□□□□ -0.06
SMARCD1-208ENST00000550280 CRKP46108 304 aa14.65□□□□□ -0.06
SMARCD1-208ENST00000550280 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.65□□□□□ -0.06
SMARCD1-208ENST00000550280 OPTNQ96CV9 577 aa14.65□□□□□ -0.06
SMARCD1-208ENST00000550280 PTPN22Q9Y2R2 807 aa14.65□□□□□ -0.06
SMARCD1-208ENST00000550280 CACNB3P54284 484 aa14.64□□□□□ -0.07
SMARCD1-208ENST00000550280 VGLL4Q14135 290 aa14.64□□□□□ -0.07
SMARCD1-208ENST00000550280 KLHDC4Q8TBB5 520 aa14.64□□□□□ -0.07
SMARCD1-208ENST00000550280 MRPL50Q8N5N7 158 aaKnown RBP14.63□□□□□ -0.07
SMARCD1-208ENST00000550280 PCDH10Q9P2E7 1040 aa14.63□□□□□ -0.07
SMARCD1-208ENST00000550280 CHAF1AQ13111 956 aaPredicted RBP14.62□□□□□ -0.07
SMARCD1-208ENST00000550280 TNFAIP1Q13829 316 aa14.62□□□□□ -0.07
SMARCD1-208ENST00000550280 FAM43AQ8N2R8 423 aa14.62□□□□□ -0.07
SMARCD1-208ENST00000550280 ARMC5Q96C12 935 aa14.62□□□□□ -0.07
SMARCD1-208ENST00000550280 ERO1AQ96HE7 468 aa14.62□□□□□ -0.07
SMARCD1-208ENST00000550280 MROH5Q6ZUA9 1318 aa14.62□□□□□ -0.07
SMARCD1-208ENST00000550280 FGFR2P21802 821 aa14.61□□□□□ -0.07
SMARCD1-208ENST00000550280 BCAMP50895 628 aa14.61□□□□□ -0.07
SMARCD1-208ENST00000550280 SP3Q02447 781 aa14.61□□□□□ -0.07
SMARCD1-208ENST00000550280 APOBEC3HQ6NTF7 200 aaKnown RBP14.61□□□□□ -0.07
SMARCD1-208ENST00000550280 FAM9BQ8IZU0 186 aa14.61□□□□□ -0.07
SMARCD1-208ENST00000550280 SNCAIPQ9Y6H5 919 aa14.61□□□□□ -0.07
SMARCD1-208ENST00000550280 RBBP6Q7Z6E9 1792 aaKnown RBP14.6□□□□□ -0.07
SMARCD1-208ENST00000550280 ZSWIM8A7E2V4 1837 aa14.6□□□□□ -0.07
SMARCD1-208ENST00000550280 CCL15-CCL14A0A0B4J2E2 113 aa14.6□□□□□ -0.07
SMARCD1-208ENST00000550280 ANP32CO43423 234 aa14.6□□□□□ -0.07
SMARCD1-208ENST00000550280 PDE8BO95263 885 aa14.6□□□□□ -0.07
SMARCD1-208ENST00000550280 EN2P19622 333 aaPredicted RBP14.6□□□□□ -0.07
SMARCD1-208ENST00000550280 RFX5P48382 616 aaPredicted RBP14.6□□□□□ -0.07
SMARCD1-208ENST00000550280 MAP3K9P80192 1104 aa14.6□□□□□ -0.07
SMARCD1-208ENST00000550280 CCL15Q16663 113 aa14.6□□□□□ -0.07
SMARCD1-208ENST00000550280 OTUD5Q96G74 571 aa14.6□□□□□ -0.07
SMARCD1-208ENST00000550280 USP44Q9H0E7 712 aa14.6□□□□□ -0.07
SMARCD1-208ENST00000550280 EFCC1Q9HA90 598 aa14.6□□□□□ -0.07
SMARCD1-208ENST00000550280 SPDYE5A6NIY4 337 aa14.59□□□□□ -0.07
SMARCD1-208ENST00000550280 HDLBPQ00341 1268 aaKnown RBP14.59□□□□□ -0.07
SMARCD1-208ENST00000550280 METTL24Q5JXM2 366 aa14.59□□□□□ -0.07
SMARCD1-208ENST00000550280 INTS3Q68E01 1043 aaKnown RBP14.59□□□□□ -0.07
SMARCD1-208ENST00000550280 OTUD7BQ6GQQ9 843 aa14.59□□□□□ -0.07
SMARCD1-208ENST00000550280 ZDHHC15Q96MV8 337 aa14.59□□□□□ -0.07
SMARCD1-208ENST00000550280 ARHGAP39Q9C0H5 1083 aa14.59□□□□□ -0.07
SMARCD1-208ENST00000550280 PTCH2Q9Y6C5 1203 aa14.59□□□□□ -0.07
SMARCD1-208ENST00000550280 TAF1CQ15572 869 aaPredicted RBP14.58□□□□□ -0.08
SMARCD1-208ENST00000550280 SSH1Q8WYL5 1049 aa14.58□□□□□ -0.08
SMARCD1-208ENST00000550280 ZKSCAN4Q969J2 545 aaPredicted RBP14.58□□□□□ -0.08
SMARCD1-208ENST00000550280 TEKT1Q969V4 418 aa14.58□□□□□ -0.08
SMARCD1-208ENST00000550280 ZNF333Q96JL9 665 aa14.58□□□□□ -0.08
SMARCD1-208ENST00000550280 KIAA0100Q14667 2235 aaKnown RBP14.57□□□□□ -0.08
SMARCD1-208ENST00000550280 BTBD19C9JJ37 291 aa14.57□□□□□ -0.08
SMARCD1-208ENST00000550280 IRF6O14896 467 aa14.57□□□□□ -0.08
SMARCD1-208ENST00000550280 GTF2A2P52657 109 aa14.57□□□□□ -0.08
SMARCD1-208ENST00000550280 MRIQ9BWK5 157 aa14.57□□□□□ -0.08
SMARCD1-208ENST00000550280 CTGFP29279 349 aa14.56□□□□□ -0.08
SMARCD1-208ENST00000550280 TNNI2P48788 182 aa14.56□□□□□ -0.08
SMARCD1-208ENST00000550280 ATG9AQ7Z3C6 839 aa14.56□□□□□ -0.08
SMARCD1-208ENST00000550280 FAM83AQ86UY5 434 aa14.56□□□□□ -0.08
SMARCD1-208ENST00000550280 VPS37DQ86XT2 251 aa14.56□□□□□ -0.08
SMARCD1-208ENST00000550280 TBC1D22AQ8WUA7 517 aa14.56□□□□□ -0.08
SMARCD1-208ENST00000550280 WRNIP1Q96S55 665 aa14.56□□□□□ -0.08
SMARCD1-208ENST00000550280 CSADQ9Y600 493 aa14.56□□□□□ -0.08
SMARCD1-208ENST00000550280 KIF16BQ96L93 1317 aa14.56□□□□□ -0.08
SMARCD1-208ENST00000550280 RPAP1Q9BWH6 1393 aaPredicted RBP14.56□□□□□ -0.08
SMARCD1-208ENST00000550280 INPP5BP32019 993 aa14.55□□□□□ -0.08
SMARCD1-208ENST00000550280 CAVIN4Q5BKX8 364 aa14.55□□□□□ -0.08
SMARCD1-208ENST00000550280 HABP4Q5JVS0 413 aaKnown RBP14.55□□□□□ -0.08
SMARCD1-208ENST00000550280 FKBP1CQ5VVH2 108 aa14.55□□□□□ -0.08
SMARCD1-208ENST00000550280 ERO1BQ86YB8 467 aa14.55□□□□□ -0.08
SMARCD1-208ENST00000550280 ZFYVE28Q9HCC9 887 aa14.55□□□□□ -0.08
SMARCD1-208ENST00000550280 PTPRCP08575 1304 aa14.55□□□□□ -0.08
SMARCD1-208ENST00000550280 ZNF316A6NFI3 1004 aaPredicted RBP14.54□□□□□ -0.08
SMARCD1-208ENST00000550280 EYA2O00167 538 aa14.54□□□□□ -0.08
SMARCD1-208ENST00000550280 TLR2O60603 784 aa14.54□□□□□ -0.08
SMARCD1-208ENST00000550280 NFIAQ12857 509 aa14.54□□□□□ -0.08
SMARCD1-208ENST00000550280 MOGSQ13724 837 aa14.54□□□□□ -0.08
SMARCD1-208ENST00000550280 PUM3Q15397 648 aaKnown RBP14.54□□□□□ -0.08
SMARCD1-208ENST00000550280 DIXDC1Q155Q3 683 aa14.54□□□□□ -0.08
SMARCD1-208ENST00000550280 HHIPL2Q6UWX4 724 aa14.54□□□□□ -0.08
SMARCD1-208ENST00000550280 MIGA2Q7L4E1 593 aa14.54□□□□□ -0.08
SMARCD1-208ENST00000550280 DAGLAQ9Y4D2 1042 aa14.54□□□□□ -0.08
SMARCD1-208ENST00000550280 ADGRA2Q96PE1 1338 aa14.54□□□□□ -0.08
SMARCD1-208ENST00000550280 FRAT2O75474 233 aaPredicted RBP14.53□□□□□ -0.08
SMARCD1-208ENST00000550280 PRDX5P30044 214 aa14.53□□□□□ -0.08
SMARCD1-208ENST00000550280 LACTBP83111 547 aaPredicted RBP14.53□□□□□ -0.08
SMARCD1-208ENST00000550280 PPIL2Q13356 520 aa14.53□□□□□ -0.08
SMARCD1-208ENST00000550280 CDC42EP5Q6NZY7 148 aa14.53□□□□□ -0.08
SMARCD1-208ENST00000550280 SH3TC2Q8TF17 1288 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms