RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 RBM5P52756 815 aaKnown RBP eCLIP23.71■■□□□ 1.39
DDX54-207ENST00000550016 BCL11AQ9H165 835 aa23.71■■□□□ 1.39
DDX54-207ENST00000550016 GGA3Q9NZ52 723 aa23.71■■□□□ 1.39
DDX54-207ENST00000550016 SMARCA5O60264 1052 aaPredicted RBP23.7■■□□□ 1.38
DDX54-207ENST00000550016 ANGEL2Q5VTE6 544 aaKnown RBP23.7■■□□□ 1.38
DDX54-207ENST00000550016 SPTY2D1Q68D10 685 aaPredicted RBP23.7■■□□□ 1.38
DDX54-207ENST00000550016 CDC37L1Q7L3B6 337 aa23.7■■□□□ 1.38
DDX54-207ENST00000550016 RWDD1Q9H446 243 aaPredicted RBP23.7■■□□□ 1.38
DDX54-207ENST00000550016 PASKQ96RG2 1323 aa23.69■■□□□ 1.38
DDX54-207ENST00000550016 PITPNM2Q9BZ72 1349 aa23.69■■□□□ 1.38
DDX54-207ENST00000550016 SPDYE2BA6NHP3 402 aa23.69■■□□□ 1.38
DDX54-207ENST00000550016 SPDYE6P0CI01 402 aa23.69■■□□□ 1.38
DDX54-207ENST00000550016 HSPA6P17066 643 aa23.69■■□□□ 1.38
DDX54-207ENST00000550016 PRDX5P30044 214 aa23.69■■□□□ 1.38
DDX54-207ENST00000550016 CRKP46108 304 aa23.69■■□□□ 1.38
DDX54-207ENST00000550016 PI16Q6UXB8 463 aa23.69■■□□□ 1.38
DDX54-207ENST00000550016 PRMT6Q96LA8 375 aaPredicted RBP23.69■■□□□ 1.38
DDX54-207ENST00000550016 GLIS2Q9BZE0 524 aaPredicted RBP23.69■■□□□ 1.38
DDX54-207ENST00000550016 ABCF2Q9UG63 623 aa23.69■■□□□ 1.38
DDX54-207ENST00000550016 PCDHAC2Q9Y5I4 1007 aa23.69■■□□□ 1.38
DDX54-207ENST00000550016 KRT26Q7Z3Y9 468 aa23.68■■□□□ 1.38
DDX54-207ENST00000550016 USP48Q86UV5 1035 aa23.68■■□□□ 1.38
DDX54-207ENST00000550016 TEKT1Q969V4 418 aa23.68■■□□□ 1.38
DDX54-207ENST00000550016 GCC1Q96CN9 775 aa23.68■■□□□ 1.38
DDX54-207ENST00000550016 SNRKQ9NRH2 765 aa23.68■■□□□ 1.38
DDX54-207ENST00000550016 MYO1BO43795 1136 aa23.67■■□□□ 1.38
DDX54-207ENST00000550016 HHIPL2Q6UWX4 724 aa23.67■■□□□ 1.38
DDX54-207ENST00000550016 SULF1Q8IWU6 871 aa23.67■■□□□ 1.38
DDX54-207ENST00000550016 TRAF5O00463 557 aa23.66■■□□□ 1.38
DDX54-207ENST00000550016 APLP1P51693 650 aa23.66■■□□□ 1.38
DDX54-207ENST00000550016 TBC1D9Q6ZT07 1266 aa23.66■■□□□ 1.38
DDX54-207ENST00000550016 ERICH6Q7L0X2 663 aa23.66■■□□□ 1.38
DDX54-207ENST00000550016 ZDHHC15Q96MV8 337 aa23.66■■□□□ 1.38
DDX54-207ENST00000550016 ZAP70P43403 619 aa23.65■■□□□ 1.38
DDX54-207ENST00000550016 CYP2E1P05181 493 aaPredicted RBP23.64■■□□□ 1.37
DDX54-207ENST00000550016 DZIP1Q86YF9 867 aaKnown RBP23.64■■□□□ 1.37
DDX54-207ENST00000550016 APOBEC3FQ8IUX4 373 aaKnown RBP23.64■■□□□ 1.37
DDX54-207ENST00000550016 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.64■■□□□ 1.37
DDX54-207ENST00000550016 ADM5C9JUS6 153 aa23.63■■□□□ 1.37
DDX54-207ENST00000550016 IGHDP01880 384 aa23.63■■□□□ 1.37
DDX54-207ENST00000550016 CENPBP07199 599 aaPredicted RBP23.63■■□□□ 1.37
DDX54-207ENST00000550016 FMR1Q06787 632 aaKnown RBP eCLIP23.63■■□□□ 1.374e-6■□□□□ 10.6
DDX54-207ENST00000550016 DIXDC1Q155Q3 683 aa23.63■■□□□ 1.37
DDX54-207ENST00000550016 ANKRD45Q5TZF3 282 aa23.63■■□□□ 1.37
DDX54-207ENST00000550016 SLF2Q8IX21 1173 aa23.63■■□□□ 1.37
DDX54-207ENST00000550016 LRP2BPQ9P2M1 347 aa23.63■■□□□ 1.37
DDX54-207ENST00000550016 ZBTB47Q9UFB7 747 aaPredicted RBP23.63■■□□□ 1.37
DDX54-207ENST00000550016 DOCK2Q92608 1830 aa23.63■■□□□ 1.37
DDX54-207ENST00000550016 CLRN2A0PK11 232 aa23.62■■□□□ 1.37
DDX54-207ENST00000550016 ATP5JP18859 108 aa23.62■■□□□ 1.37
DDX54-207ENST00000550016 MECOMQ03112 1051 aa23.62■■□□□ 1.37
DDX54-207ENST00000550016 TDRD3Q9H7E2 651 aaKnown RBP23.62■■□□□ 1.37
DDX54-207ENST00000550016 ZNF70Q9UC06 446 aaPredicted RBP23.62■■□□□ 1.37
DDX54-207ENST00000550016 AOX1Q06278 1338 aa23.61■■□□□ 1.37
DDX54-207ENST00000550016 MAST2Q6P0Q8 1798 aa23.61■■□□□ 1.37
DDX54-207ENST00000550016 SPDYE2Q495Y8 402 aa23.61■■□□□ 1.37
DDX54-207ENST00000550016 APOBEC3HQ6NTF7 200 aaKnown RBP23.61■■□□□ 1.37
DDX54-207ENST00000550016 SMC5Q8IY18 1101 aa23.61■■□□□ 1.37
DDX54-207ENST00000550016 RAI14Q9P0K7 980 aa23.61■■□□□ 1.37
DDX54-207ENST00000550016 DAGLAQ9Y4D2 1042 aa23.61■■□□□ 1.37
DDX54-207ENST00000550016 TMEM88BA6NKF7 163 aa23.6■■□□□ 1.37
DDX54-207ENST00000550016 IGSF3O75054 1194 aa23.6■■□□□ 1.37
DDX54-207ENST00000550016 GSTO1P78417 241 aa23.6■■□□□ 1.37
DDX54-207ENST00000550016 DLK2Q6UY11 383 aa23.6■■□□□ 1.37
DDX54-207ENST00000550016 FAM163AQ96GL9 167 aaPredicted RBP23.6■■□□□ 1.37
DDX54-207ENST00000550016 VEZTQ9HBM0 779 aa23.6■■□□□ 1.37
DDX54-207ENST00000550016 SCAF8Q9UPN6 1271 aaKnown RBP23.6■■□□□ 1.37
DDX54-207ENST00000550016 LDHCP07864 332 aa23.59■■□□□ 1.37
DDX54-207ENST00000550016 CST9Q5W186 159 aa23.59■■□□□ 1.37
DDX54-207ENST00000550016 ZNF384Q8TF68 577 aa23.59■■□□□ 1.37
DDX54-207ENST00000550016 NSUN4Q96CB9 384 aaKnown RBP23.59■■□□□ 1.37
DDX54-207ENST00000550016 GPATCH3Q96I76 525 aa23.59■■□□□ 1.37
DDX54-207ENST00000550016 PIH1D3Q9NQM4 214 aaKnown RBP23.59■■□□□ 1.37
DDX54-207ENST00000550016 CREBZFQ9NS37 354 aa23.59■■□□□ 1.37
DDX54-207ENST00000550016 ECHDC1Q9NTX5 307 aa23.59■■□□□ 1.37
DDX54-207ENST00000550016 NDUFB9Q9Y6M9 179 aa23.59■■□□□ 1.37
DDX54-207ENST00000550016 GAKO14976 1311 aa23.59■■□□□ 1.37
DDX54-207ENST00000550016 CELF2O95319 508 aaKnown RBP23.58■■□□□ 1.37
DDX54-207ENST00000550016 CDCA5Q96FF9 252 aa23.58■■□□□ 1.37
DDX54-207ENST00000550016 BOLA2Q9H3K6 86 aa23.58■■□□□ 1.37
DDX54-207ENST00000550016 MYH7P12883 1935 aa23.58■■□□□ 1.37
DDX54-207ENST00000550016 AK9Q5TCS8 1911 aa23.58■■□□□ 1.37
DDX54-207ENST00000550016 TTF1Q15361 905 aaPredicted RBP23.57■■□□□ 1.36
DDX54-207ENST00000550016 HAUS7Q99871 368 aa23.57■■□□□ 1.36
DDX54-207ENST00000550016 DEFB129Q9H1M3 183 aa23.57■■□□□ 1.36
DDX54-207ENST00000550016 ANTXR1Q9H6X2 564 aa23.57■■□□□ 1.36
DDX54-207ENST00000550016 ZNF408Q9H9D4 720 aa23.57■■□□□ 1.36
DDX54-207ENST00000550016 TMOD2Q9NZR1 351 aa23.57■■□□□ 1.36
DDX54-207ENST00000550016 MROH7-TTC4A0A0A0MT08 1334 aa23.57■■□□□ 1.36
DDX54-207ENST00000550016 TNFAIP1Q13829 316 aa23.56■■□□□ 1.36
DDX54-207ENST00000550016 DNAJC2Q99543 621 aaKnown RBP23.56■■□□□ 1.36
DDX54-207ENST00000550016 PPP2R3BQ9Y5P8 575 aa23.56■■□□□ 1.36
DDX54-207ENST00000550016 IDH1O75874 414 aaKnown RBP23.55■■□□□ 1.36
DDX54-207ENST00000550016 HTRA3P83110 453 aa23.55■■□□□ 1.36
DDX54-207ENST00000550016 FKBP1CQ5VVH2 108 aa23.55■■□□□ 1.36
DDX54-207ENST00000550016 PRAMEF18Q5VWM3 479 aa23.55■■□□□ 1.36
DDX54-207ENST00000550016 NAA16Q6N069 864 aaPredicted RBP23.55■■□□□ 1.36
DDX54-207ENST00000550016 CDC42EP5Q6NZY7 148 aa23.55■■□□□ 1.36
DDX54-207ENST00000550016 USP40Q9NVE5 1235 aa23.55■■□□□ 1.36
DDX54-207ENST00000550016 GPR75-ASB3A0A0A6YYF3 556 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms