RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 FBXW7Q969H0 707 aa20.89■□□□□ 0.93
LETMD1-220ENST00000549686 OSBP2Q969R2 916 aa20.89■□□□□ 0.93
LETMD1-220ENST00000549686 JAG2Q9Y219 1238 aa20.89■□□□□ 0.93
LETMD1-220ENST00000549686 MCCP23508 829 aa20.88■□□□□ 0.93
LETMD1-220ENST00000549686 DACT2Q5SW24 774 aa20.88■□□□□ 0.93
LETMD1-220ENST00000549686 USP26Q9BXU7 913 aa20.88■□□□□ 0.93
LETMD1-220ENST00000549686 ARHGAP27Q6ZUM4 889 aa20.87■□□□□ 0.93
LETMD1-220ENST00000549686 AIDAQ96BJ3 306 aa20.87■□□□□ 0.93
LETMD1-220ENST00000549686 C22orf23Q9BZE7 217 aa20.87■□□□□ 0.93
LETMD1-220ENST00000549686 LSG1Q9H089 658 aaKnown RBP20.87■□□□□ 0.93
LETMD1-220ENST00000549686 IL25Q9H293 177 aa20.87■□□□□ 0.93
LETMD1-220ENST00000549686 YDJCA8MPS7 323 aa20.86■□□□□ 0.93
LETMD1-220ENST00000549686 M0R2C6 588 aa20.86■□□□□ 0.93
LETMD1-220ENST00000549686 GPAA1O43292 621 aa20.86■□□□□ 0.93
LETMD1-220ENST00000549686 GNAT2P19087 354 aa20.86■□□□□ 0.93
LETMD1-220ENST00000549686 ZNF589Q86UQ0 364 aaPredicted RBP20.86■□□□□ 0.93
LETMD1-220ENST00000549686 FAM163AQ96GL9 167 aaPredicted RBP20.86■□□□□ 0.93
LETMD1-220ENST00000549686 SEC62Q99442 399 aaKnown RBP20.86■□□□□ 0.93
LETMD1-220ENST00000549686 DSCC1Q9BVC3 393 aa20.86■□□□□ 0.93
LETMD1-220ENST00000549686 MRIQ9BWK5 157 aa20.86■□□□□ 0.93
LETMD1-220ENST00000549686 PUS7LQ9H0K6 701 aaKnown RBP20.86■□□□□ 0.93
LETMD1-220ENST00000549686 CHGBP05060 677 aa20.85■□□□□ 0.93
LETMD1-220ENST00000549686 LMNB1P20700 586 aa20.85■□□□□ 0.93
LETMD1-220ENST00000549686 RBM25P49756 843 aaKnown RBP20.85■□□□□ 0.93
LETMD1-220ENST00000549686 TBC1D32Q96NH3 1257 aa20.85■□□□□ 0.93
LETMD1-220ENST00000549686 NOL10Q9BSC4 688 aaKnown RBP20.85■□□□□ 0.93
LETMD1-220ENST00000549686 TSHZ2Q9NRE2 1034 aa20.85■□□□□ 0.93
LETMD1-220ENST00000549686 MAST2Q6P0Q8 1798 aa20.85■□□□□ 0.93
LETMD1-220ENST00000549686 RPAP1Q9BWH6 1393 aaPredicted RBP20.85■□□□□ 0.93
LETMD1-220ENST00000549686 MAGEB6P1A0A0J9YX57 407 aa20.84■□□□□ 0.93
LETMD1-220ENST00000549686 BAG3O95817 575 aa20.84■□□□□ 0.93
LETMD1-220ENST00000549686 VIL1P09327 827 aaKnown RBP20.84■□□□□ 0.93
LETMD1-220ENST00000549686 MMP14P50281 582 aa20.84■□□□□ 0.93
LETMD1-220ENST00000549686 HDLBPQ00341 1268 aaKnown RBP20.84■□□□□ 0.93
LETMD1-220ENST00000549686 RASSF7Q02833 373 aa20.84■□□□□ 0.93
LETMD1-220ENST00000549686 TNIP1Q15025 636 aa20.84■□□□□ 0.93
LETMD1-220ENST00000549686 SLFNL1Q499Z3 407 aa20.84■□□□□ 0.93
LETMD1-220ENST00000549686 CERS5Q8N5B7 392 aa20.84■□□□□ 0.93
LETMD1-220ENST00000549686 MAP4K1Q92918 833 aa20.84■□□□□ 0.93
LETMD1-220ENST00000549686 U3KPZ7 1027 aaPredicted RBP20.84■□□□□ 0.93
LETMD1-220ENST00000549686 MYH7P12883 1935 aa20.84■□□□□ 0.93
LETMD1-220ENST00000549686 MROH7-TTC4A0A0A0MT08 1334 aa20.83■□□□□ 0.93
LETMD1-220ENST00000549686 MBD4O95243 580 aa20.83■□□□□ 0.93
LETMD1-220ENST00000549686 RSBN1LQ6PCB5 846 aaPredicted RBP20.83■□□□□ 0.93
LETMD1-220ENST00000549686 CCDC129Q6ZRS4 1044 aa20.83■□□□□ 0.93
LETMD1-220ENST00000549686 ZNF384Q8TF68 577 aa20.83■□□□□ 0.93
LETMD1-220ENST00000549686 STRBPQ96SI9 672 aaKnown RBP20.83■□□□□ 0.93
LETMD1-220ENST00000549686 KCNQ5Q9NR82 932 aa20.83■□□□□ 0.93
LETMD1-220ENST00000549686 TTF2Q9UNY4 1162 aaKnown RBP20.83■□□□□ 0.93
LETMD1-220ENST00000549686 GAKO14976 1311 aa20.82■□□□□ 0.92
LETMD1-220ENST00000549686 GRIN3BO60391 1043 aa20.82■□□□□ 0.92
LETMD1-220ENST00000549686 PLCG2P16885 1265 aa20.82■□□□□ 0.92
LETMD1-220ENST00000549686 EIF6P56537 245 aaKnown RBP20.82■□□□□ 0.92
LETMD1-220ENST00000549686 PPP4CP60510 307 aa20.82■□□□□ 0.92
LETMD1-220ENST00000549686 CIAPIN1Q6FI81 312 aa20.82■□□□□ 0.92
LETMD1-220ENST00000549686 HHIPL2Q6UWX4 724 aa20.82■□□□□ 0.92
LETMD1-220ENST00000549686 AGBL3Q8NEM8 1001 aa20.82■□□□□ 0.92
LETMD1-220ENST00000549686 CTNNA3Q9UI47 895 aa20.82■□□□□ 0.92
LETMD1-220ENST00000549686 COL4A5P29400 1685 aa20.81■□□□□ 0.92
LETMD1-220ENST00000549686 FZD9O00144 591 aa20.81■□□□□ 0.92
LETMD1-220ENST00000549686 HSPD1P10809 573 aaKnown RBP20.81■□□□□ 0.92
LETMD1-220ENST00000549686 YBX3P16989 372 aaKnown RBP eCLIP20.81■□□□□ 0.925e-13■■□□□ 14.4
LETMD1-220ENST00000549686 ANAPC15P60006 121 aa20.81■□□□□ 0.92
LETMD1-220ENST00000549686 GRIK5Q16478 980 aa20.81■□□□□ 0.92
LETMD1-220ENST00000549686 RNF20Q5VTR2 975 aa20.81■□□□□ 0.92
LETMD1-220ENST00000549686 ADGRA1Q86SQ6 560 aa20.81■□□□□ 0.92
LETMD1-220ENST00000549686 RIOK1Q9BRS2 568 aaKnown RBP20.81■□□□□ 0.92
LETMD1-220ENST00000549686 GPR75-ASB3A0A0A6YYF3 556 aa20.8■□□□□ 0.92
LETMD1-220ENST00000549686 PSMD14O00487 310 aa20.8■□□□□ 0.92
LETMD1-220ENST00000549686 RAD17O75943 681 aa20.8■□□□□ 0.92
LETMD1-220ENST00000549686 RPS12P25398 132 aaKnown RBP20.8■□□□□ 0.92
LETMD1-220ENST00000549686 HSPA4P34932 840 aa20.8■□□□□ 0.92
LETMD1-220ENST00000549686 PTH1RQ03431 593 aa20.8■□□□□ 0.92
LETMD1-220ENST00000549686 CXCL9Q07325 125 aa20.8■□□□□ 0.92
LETMD1-220ENST00000549686 MIGA1Q8NAN2 632 aa20.8■□□□□ 0.92
LETMD1-220ENST00000549686 TEKT1Q969V4 418 aa20.8■□□□□ 0.92
LETMD1-220ENST00000549686 NACAP1Q9BZK3 213 aa20.8■□□□□ 0.92
LETMD1-220ENST00000549686 SERPINA10Q9UK55 444 aa20.8■□□□□ 0.92
LETMD1-220ENST00000549686 CHD4Q14839 1912 aa20.8■□□□□ 0.92
LETMD1-220ENST00000549686 ZMYM6O95789 1325 aa20.79■□□□□ 0.92
LETMD1-220ENST00000549686 PATL2C9JE40 543 aaKnown RBP20.79■□□□□ 0.92
LETMD1-220ENST00000549686 DIXDC1Q155Q3 683 aa20.79■□□□□ 0.92
LETMD1-220ENST00000549686 ALX1Q15699 326 aa20.79■□□□□ 0.92
LETMD1-220ENST00000549686 GPR162Q16538 588 aa20.79■□□□□ 0.92
LETMD1-220ENST00000549686 LCORLQ8N3X6 602 aa20.79■□□□□ 0.92
LETMD1-220ENST00000549686 CRNKL1Q9BZJ0 848 aaKnown RBP20.79■□□□□ 0.92
LETMD1-220ENST00000549686 ARMT1Q9H993 441 aa20.79■□□□□ 0.92
LETMD1-220ENST00000549686 HDAC9Q9UKV0 1011 aa20.79■□□□□ 0.92
LETMD1-220ENST00000549686 RBM8AQ9Y5S9 174 aaKnown RBP20.79■□□□□ 0.92
LETMD1-220ENST00000549686 CCDC88AQ3V6T2 1871 aa20.78■□□□□ 0.92
LETMD1-220ENST00000549686 GIMAP6Q6P9H5 292 aa20.78■□□□□ 0.92
LETMD1-220ENST00000549686 OGFOD1Q8N543 542 aa20.78■□□□□ 0.92
LETMD1-220ENST00000549686 IL27Q8NEV9 243 aa20.78■□□□□ 0.92
LETMD1-220ENST00000549686 GMLQ99445 158 aa20.78■□□□□ 0.92
LETMD1-220ENST00000549686 MXD3Q9BW11 206 aa20.78■□□□□ 0.92
LETMD1-220ENST00000549686 AATFQ9NY61 560 aaKnown RBP eCLIP20.78■□□□□ 0.92
LETMD1-220ENST00000549686 SCN9AQ15858 1988 aa20.77■□□□□ 0.92
LETMD1-220ENST00000549686 F8W031 263 aaPredicted RBP20.77■□□□□ 0.92
LETMD1-220ENST00000549686 ZKSCAN1P17029 563 aaPredicted RBP20.77■□□□□ 0.92
LETMD1-220ENST00000549686 BTDP43251 543 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms