RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 ATP2B3Q16720 1220 aa30.03■■■□□ 2.4
USP44-205ENST00000549639 DZIP1LQ8IYY4 767 aaKnown RBP30.03■■■□□ 2.4
USP44-205ENST00000549639 MAP3K11Q16584 847 aa30.02■■■□□ 2.4
USP44-205ENST00000549639 LDLRAD1Q5T700 205 aa30.02■■■□□ 2.4
USP44-205ENST00000549639 ZKSCAN2Q63HK3 967 aa30.02■■■□□ 2.4
USP44-205ENST00000549639 WDR66Q8TBY9 1149 aa30.02■■■□□ 2.4
USP44-205ENST00000549639 GNL3LQ9NVN8 582 aaKnown RBP30.02■■■□□ 2.4
USP44-205ENST00000549639 ZNF70Q9UC06 446 aaPredicted RBP30.02■■■□□ 2.4
USP44-205ENST00000549639 TEKT1Q969V4 418 aa30.01■■■□□ 2.39
USP44-205ENST00000549639 ANGEL1Q9UNK9 670 aaKnown RBP30.01■■■□□ 2.39
USP44-205ENST00000549639 ZBED9Q6R2W3 1325 aa30■■■□□ 2.39
USP44-205ENST00000549639 ZBTB22O15209 634 aa30■■■□□ 2.39
USP44-205ENST00000549639 SRGAP3O43295 1099 aa30■■■□□ 2.39
USP44-205ENST00000549639 RASA3Q14644 834 aa30■■■□□ 2.39
USP44-205ENST00000549639 RNF186Q9NXI6 227 aa30■■■□□ 2.39
USP44-205ENST00000549639 AKAP11Q9UKA4 1901 aa29.99■■■□□ 2.39
USP44-205ENST00000549639 CAPN15O75808 1086 aa29.99■■■□□ 2.39
USP44-205ENST00000549639 GNAI2P04899 355 aa29.99■■■□□ 2.39
USP44-205ENST00000549639 PRKG1Q13976 671 aa29.99■■■□□ 2.39
USP44-205ENST00000549639 TDRD3Q9H7E2 651 aaKnown RBP29.99■■■□□ 2.39
USP44-205ENST00000549639 PA2G4Q9UQ80 394 aaKnown RBP29.99■■■□□ 2.39
USP44-205ENST00000549639 SEMA3EO15041 775 aa29.98■■■□□ 2.39
USP44-205ENST00000549639 TNNI2P48788 182 aa29.98■■■□□ 2.39
USP44-205ENST00000549639 AOX1Q06278 1338 aa29.97■■■□□ 2.39
USP44-205ENST00000549639 GRIK5Q16478 980 aa29.97■■■□□ 2.39
USP44-205ENST00000549639 CLUAP1Q96AJ1 413 aa29.97■■■□□ 2.39
USP44-205ENST00000549639 TRPA1O75762 1119 aa29.96■■■□□ 2.39
USP44-205ENST00000549639 HHIPL2Q6UWX4 724 aa29.96■■■□□ 2.39
USP44-205ENST00000549639 ZDHHC15Q96MV8 337 aa29.96■■■□□ 2.39
USP44-205ENST00000549639 SSC5DA1L4H1 1573 aa29.95■■■□□ 2.39
USP44-205ENST00000549639 IREB2P48200 963 aaKnown RBP29.95■■■□□ 2.39
USP44-205ENST00000549639 NBPF12Q5TAG4 269 aaPredicted RBP29.95■■■□□ 2.39
USP44-205ENST00000549639 AKAP2Q9Y2D5 859 aa29.95■■■□□ 2.39
USP44-205ENST00000549639 TM4SF4P48230 202 aa29.94■■■□□ 2.38
USP44-205ENST00000549639 SREBF2Q12772 1141 aa29.94■■■□□ 2.38
USP44-205ENST00000549639 SLC10A4Q96EP9 437 aa29.94■■■□□ 2.38
USP44-205ENST00000549639 DENND2AQ9ULE3 1009 aa29.94■■■□□ 2.38
USP44-205ENST00000549639 TNNQ9UQP3 1299 aa29.94■■■□□ 2.38
USP44-205ENST00000549639 MYH13Q9UKX3 1938 aa29.94■■■□□ 2.38
USP44-205ENST00000549639 FKBP1CQ5VVH2 108 aa29.93■■■□□ 2.38
USP44-205ENST00000549639 TMEM57Q8N5G2 664 aa29.93■■■□□ 2.38
USP44-205ENST00000549639 TMOD2Q9NZR1 351 aa29.93■■■□□ 2.38
USP44-205ENST00000549639 SPRYD7Q5W111 196 aa29.92■■■□□ 2.38
USP44-205ENST00000549639 SALL1Q9NSC2 1324 aa29.92■■■□□ 2.38
USP44-205ENST00000549639 TCP10L2B9ZVM9 353 aa29.91■■■□□ 2.38
USP44-205ENST00000549639 ZBTB48P10074 688 aaPredicted RBP29.91■■■□□ 2.38
USP44-205ENST00000549639 FTSJ3Q8IY81 847 aaKnown RBP29.91■■■□□ 2.38
USP44-205ENST00000549639 ABHD8Q96I13 439 aa29.91■■■□□ 2.38
USP44-205ENST00000549639 CASP8AP2Q9UKL3 1982 aa29.91■■■□□ 2.38
USP44-205ENST00000549639 USP2O75604 605 aaPredicted RBP29.9■■■□□ 2.38
USP44-205ENST00000549639 INHBEP58166 350 aa29.9■■■□□ 2.38
USP44-205ENST00000549639 APOBEC3HQ6NTF7 200 aaKnown RBP29.9■■■□□ 2.38
USP44-205ENST00000549639 ANKRD13AQ8IZ07 590 aa29.9■■■□□ 2.38
USP44-205ENST00000549639 ZGPATQ8N5A5 531 aaKnown RBP29.9■■■□□ 2.38
USP44-205ENST00000549639 TEPSINQ96N21 525 aa29.9■■■□□ 2.38
USP44-205ENST00000549639 FZD1Q9UP38 647 aa29.9■■■□□ 2.38
USP44-205ENST00000549639 CCDC102BQ68D86 513 aa29.89■■■□□ 2.38
USP44-205ENST00000549639 FAM83AQ86UY5 434 aa29.89■■■□□ 2.38
USP44-205ENST00000549639 PHKA1P46020 1223 aa29.88■■■□□ 2.37
USP44-205ENST00000549639 HOOK2Q96ED9 719 aa29.88■■■□□ 2.37
USP44-205ENST00000549639 PDS5AQ29RF7 1337 aaKnown RBP29.88■■■□□ 2.37
USP44-205ENST00000549639 A0A1B0GUL7 405 aa29.87■■■□□ 2.37
USP44-205ENST00000549639 MANSC4A6NHS7 340 aaPredicted RBP29.87■■■□□ 2.37
USP44-205ENST00000549639 LDHBP07195 334 aaKnown RBP29.87■■■□□ 2.37
USP44-205ENST00000549639 TFCP2Q12800 502 aa29.87■■■□□ 2.37
USP44-205ENST00000549639 G3BP1Q13283 466 aaKnown RBP eCLIP29.87■■■□□ 2.37
USP44-205ENST00000549639 MVPQ14764 893 aaKnown RBP29.87■■■□□ 2.37
USP44-205ENST00000549639 TMEM39BQ9GZU3 492 aa29.87■■■□□ 2.37
USP44-205ENST00000549639 TIMM10P62072 90 aa29.86■■■□□ 2.37
USP44-205ENST00000549639 MKRN3Q13064 507 aaKnown RBP29.86■■■□□ 2.37
USP44-205ENST00000549639 WNK4Q96J92 1243 aa29.86■■■□□ 2.37
USP44-205ENST00000549639 PNMA6EA0A0J9YXQ4 647 aa29.85■■■□□ 2.37
USP44-205ENST00000549639 ALDH1A1P00352 501 aa29.85■■■□□ 2.37
USP44-205ENST00000549639 ADORA1P30542 326 aa29.85■■■□□ 2.37
USP44-205ENST00000549639 NOM1Q5C9Z4 860 aaKnown RBP29.85■■■□□ 2.37
USP44-205ENST00000549639 CLMNQ96JQ2 1002 aa29.85■■■□□ 2.37
USP44-205ENST00000549639 CFHR5Q9BXR6 569 aa29.85■■■□□ 2.37
USP44-205ENST00000549639 PRDX5P30044 214 aa29.84■■■□□ 2.37
USP44-205ENST00000549639 DGKZQ13574 1117 aa29.84■■■□□ 2.37
USP44-205ENST00000549639 XAGE2Q96GT9 111 aa29.84■■■□□ 2.37
USP44-205ENST00000549639 MCOLN1Q9GZU1 580 aa29.84■■■□□ 2.37
USP44-205ENST00000549639 RPAP1Q9BWH6 1393 aaPredicted RBP29.83■■■□□ 2.37
USP44-205ENST00000549639 DAGLAQ9Y4D2 1042 aa29.83■■■□□ 2.37
USP44-205ENST00000549639 CACNB3P54284 484 aa29.82■■■□□ 2.36
USP44-205ENST00000549639 ITPRIPQ8IWB1 547 aa29.82■■■□□ 2.36
USP44-205ENST00000549639 ATP8B2P98198 1209 aa29.81■■■□□ 2.36
USP44-205ENST00000549639 RASGRF1Q13972 1273 aa29.81■■■□□ 2.36
USP44-205ENST00000549639 POLA2Q14181 598 aa29.81■■■□□ 2.36
USP44-205ENST00000549639 SPTY2D1Q68D10 685 aaPredicted RBP29.81■■■□□ 2.36
USP44-205ENST00000549639 SLF2Q8IX21 1173 aa29.81■■■□□ 2.36
USP44-205ENST00000549639 NEUROD6Q96NK8 337 aa29.81■■■□□ 2.36
USP44-205ENST00000549639 ZBTB7BO15156 539 aaPredicted RBP29.8■■■□□ 2.36
USP44-205ENST00000549639 MS4A1P11836 297 aa29.8■■■□□ 2.36
USP44-205ENST00000549639 MAP3K9P80192 1104 aa29.8■■■□□ 2.36
USP44-205ENST00000549639 DIXDC1Q155Q3 683 aa29.8■■■□□ 2.36
USP44-205ENST00000549639 CDAN1Q8IWY9 1227 aa29.8■■■□□ 2.36
USP44-205ENST00000549639 SSH3Q8TE77 659 aa29.8■■■□□ 2.36
USP44-205ENST00000549639 LAMB1P07942 1786 aa29.8■■■□□ 2.36
USP44-205ENST00000549639 GORABQ5T7V8 394 aa29.79■■■□□ 2.36
USP44-205ENST00000549639 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms