RNA–Protein interactions for RNA: ENST00000549302.1

ARL1-206, Transcript of ADP ribosylation factor like GTPase 1, human

TSL 3

Gene ARL1, Length 725 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL1-206	ENST00000549302	DBF4	Q9UBU7	674 aa	Predicted RBP	12.48	□□□□□ -0.41
ARL1-206	ENST00000549302	GGA1	Q9UJY5	639 aa		12.48	□□□□□ -0.41
ARL1-206	ENST00000549302	HDAC9	Q9UKV0	1011 aa		12.48	□□□□□ -0.41
ARL1-206	ENST00000549302	UFL1	O94874	794 aa		12.47	□□□□□ -0.41
ARL1-206	ENST00000549302	EGFR	P00533	1210 aa		12.47	□□□□□ -0.41
ARL1-206	ENST00000549302	VIL1	P09327	827 aa	Known RBP	12.47	□□□□□ -0.41
ARL1-206	ENST00000549302	FKBP1B	P68106	108 aa		12.47	□□□□□ -0.41
ARL1-206	ENST00000549302	TBC1D16	Q8TBP0	767 aa		12.47	□□□□□ -0.41
ARL1-206	ENST00000549302	CDCA5	Q96FF9	252 aa		12.47	□□□□□ -0.41
ARL1-206	ENST00000549302	CSRNP1	Q96S65	589 aa		12.47	□□□□□ -0.41
ARL1-206	ENST00000549302	HYPK	Q9NX55	129 aa		12.47	□□□□□ -0.41
ARL1-206	ENST00000549302	LAMB4	A4D0S4	1761 aa		12.46	□□□□□ -0.41
ARL1-206	ENST00000549302	CHL1	O00533	1208 aa		12.46	□□□□□ -0.41
ARL1-206	ENST00000549302	HOXB7	P09629	217 aa		12.46	□□□□□ -0.41
ARL1-206	ENST00000549302	SCARF1	Q14162	830 aa		12.46	□□□□□ -0.41
ARL1-206	ENST00000549302	PKN2	Q16513	984 aa	Known RBP	12.46	□□□□□ -0.41
ARL1-206	ENST00000549302	RIC3	Q7Z5B4	369 aa		12.46	□□□□□ -0.41
ARL1-206	ENST00000549302	AGBL3	Q8NEM8	1001 aa		12.46	□□□□□ -0.41
ARL1-206	ENST00000549302	ISCA1	Q9BUE6	129 aa		12.46	□□□□□ -0.41
ARL1-206	ENST00000549302	KCNQ5	Q9NR82	932 aa		12.46	□□□□□ -0.41
ARL1-206	ENST00000549302	CLCN1	P35523	988 aa		12.45	□□□□□ -0.42
ARL1-206	ENST00000549302	TTLL12	Q14166	644 aa	Predicted RBP	12.45	□□□□□ -0.42
ARL1-206	ENST00000549302	KRT24	Q2M2I5	525 aa		12.45	□□□□□ -0.42
ARL1-206	ENST00000549302	CCDC152	Q4G0S7	254 aa		12.45	□□□□□ -0.42
ARL1-206	ENST00000549302	ANGEL2	Q5VTE6	544 aa	Known RBP	12.45	□□□□□ -0.42
ARL1-206	ENST00000549302	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12.45	□□□□□ -0.42
ARL1-206	ENST00000549302	BLOC1S3	Q6QNY0	202 aa		12.45	□□□□□ -0.42
ARL1-206	ENST00000549302	GPCPD1	Q9NPB8	672 aa		12.45	□□□□□ -0.42
ARL1-206	ENST00000549302	PODXL2	Q9NZ53	605 aa		12.45	□□□□□ -0.42
ARL1-206	ENST00000549302	RTL9	Q8NET4	1388 aa		12.44	□□□□□ -0.42
ARL1-206	ENST00000549302	NUP98	P52948	1817 aa		12.44	□□□□□ -0.42
ARL1-206	ENST00000549302	USP17L8	P0C7I0	530 aa		12.44	□□□□□ -0.42
ARL1-206	ENST00000549302	NF2	P35240	595 aa		12.44	□□□□□ -0.42
ARL1-206	ENST00000549302	TRIM28	Q13263	835 aa	Known RBP	12.44	□□□□□ -0.42
ARL1-206	ENST00000549302	WDR43	Q15061	677 aa	Known RBP eCLIP	12.44	□□□□□ -0.42
ARL1-206	ENST00000549302	RALBP1	Q15311	655 aa		12.44	□□□□□ -0.42
ARL1-206	ENST00000549302	PRPF38B	Q5VTL8	546 aa	Known RBP	12.44	□□□□□ -0.42
ARL1-206	ENST00000549302	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.44	□□□□□ -0.42
ARL1-206	ENST00000549302	TRPM7	Q96QT4	1865 aa		12.43	□□□□□ -0.42
ARL1-206	ENST00000549302	GCGR	P47871	477 aa		12.43	□□□□□ -0.42
ARL1-206	ENST00000549302	ZNF280A	P59817	542 aa	Predicted RBP	12.43	□□□□□ -0.42
ARL1-206	ENST00000549302	RASAL3	Q86YV0	1011 aa		12.43	□□□□□ -0.42
ARL1-206	ENST00000549302	ANKRD18A	Q8IVF6	992 aa		12.43	□□□□□ -0.42
ARL1-206	ENST00000549302	CCDC146	Q8IYE0	955 aa		12.43	□□□□□ -0.42
ARL1-206	ENST00000549302	OGFOD1	Q8N543	542 aa		12.43	□□□□□ -0.42
ARL1-206	ENST00000549302	MYOZ2	Q9NPC6	264 aa		12.43	□□□□□ -0.42
ARL1-206	ENST00000549302	ASTN2	O75129	1339 aa	Predicted RBP	12.42	□□□□□ -0.42
ARL1-206	ENST00000549302	USP17L3	A6NCW0	530 aa		12.42	□□□□□ -0.42
ARL1-206	ENST00000549302	USP17L4	A6NCW7	530 aa		12.42	□□□□□ -0.42
ARL1-206	ENST00000549302	ATP2B4	P23634	1241 aa		12.42	□□□□□ -0.42
ARL1-206	ENST00000549302	DUSP27	Q5VZP5	1158 aa		12.42	□□□□□ -0.42
ARL1-206	ENST00000549302	USP17L1	Q7RTZ2	530 aa		12.42	□□□□□ -0.42
ARL1-206	ENST00000549302	PODN	Q7Z5L7	613 aa		12.42	□□□□□ -0.42
ARL1-206	ENST00000549302	TMUB1	Q9BVT8	246 aa		12.42	□□□□□ -0.42
ARL1-206	ENST00000549302	CHMP4A	Q9BY43	222 aa		12.42	□□□□□ -0.42
ARL1-206	ENST00000549302	KDM3B	Q7LBC6	1761 aa		12.42	□□□□□ -0.42
ARL1-206	ENST00000549302	PDE4DIP	Q5VU43	2346 aa		12.42	□□□□□ -0.42
ARL1-206	ENST00000549302	XDH	P47989	1333 aa		12.41	□□□□□ -0.42
ARL1-206	ENST00000549302	PITPNM2	Q9BZ72	1349 aa		12.41	□□□□□ -0.42
ARL1-206	ENST00000549302	PDE8A	O60658	829 aa		12.41	□□□□□ -0.42
ARL1-206	ENST00000549302	CD46	P15529	392 aa		12.41	□□□□□ -0.42
ARL1-206	ENST00000549302	CCDC191	Q8NCU4	936 aa		12.41	□□□□□ -0.42
ARL1-206	ENST00000549302	RUNDC1	Q96C34	613 aa		12.41	□□□□□ -0.42
ARL1-206	ENST00000549302	SEC31B	Q9NQW1	1179 aa		12.41	□□□□□ -0.42
ARL1-206	ENST00000549302	CASP8AP2	Q9UKL3	1982 aa		12.4	□□□□□ -0.42
ARL1-206	ENST00000549302	UBE2Q2L	H0YL09	131 aa		12.4	□□□□□ -0.42
ARL1-206	ENST00000549302	TBC1D8	O95759	1140 aa		12.4	□□□□□ -0.42
ARL1-206	ENST00000549302	DDX58	O95786	925 aa	Known RBP	12.4	□□□□□ -0.42
ARL1-206	ENST00000549302	SREBF2	Q12772	1141 aa		12.4	□□□□□ -0.42
ARL1-206	ENST00000549302	AMHR2	Q16671	573 aa		12.4	□□□□□ -0.42
ARL1-206	ENST00000549302	NKX2-3	Q8TAU0	364 aa		12.4	□□□□□ -0.42
ARL1-206	ENST00000549302	ZNF296	Q8WUU4	475 aa	Predicted RBP	12.4	□□□□□ -0.42
ARL1-206	ENST00000549302	CCDC85A	Q96PX6	553 aa	Predicted RBP	12.4	□□□□□ -0.42
ARL1-206	ENST00000549302	CDC5L	Q99459	802 aa	Known RBP	12.4	□□□□□ -0.42
ARL1-206	ENST00000549302	MYD88	Q99836	296 aa		12.4	□□□□□ -0.42
ARL1-206	ENST00000549302	REPIN1	Q9BWE0	567 aa	Known RBP	12.4	□□□□□ -0.42
ARL1-206	ENST00000549302	FAM217B	Q9NTX9	383 aa	Predicted RBP	12.4	□□□□□ -0.42
ARL1-206	ENST00000549302	CWC25	Q9NXE8	425 aa	Predicted RBP	12.4	□□□□□ -0.42
ARL1-206	ENST00000549302	TRIM66	O15016	1216 aa		12.39	□□□□□ -0.43
ARL1-206	ENST00000549302	PCCA	P05165	728 aa	Predicted RBP	12.39	□□□□□ -0.43
ARL1-206	ENST00000549302	CALD1	Q05682	793 aa	Known RBP	12.39	□□□□□ -0.43
ARL1-206	ENST00000549302	FUT2	Q10981	343 aa		12.39	□□□□□ -0.43
ARL1-206	ENST00000549302	PUS10	Q3MIT2	529 aa	Known RBP	12.39	□□□□□ -0.43
ARL1-206	ENST00000549302	ARMC9	Q7Z3E5	817 aa		12.39	□□□□□ -0.43
ARL1-206	ENST00000549302	DUOX1	Q9NRD9	1551 aa		12.39	□□□□□ -0.43
ARL1-206	ENST00000549302	NR1I2	O75469	434 aa		12.38	□□□□□ -0.43
ARL1-206	ENST00000549302	MOB2	Q70IA6	237 aa		12.38	□□□□□ -0.43
ARL1-206	ENST00000549302	GML	Q99445	158 aa		12.38	□□□□□ -0.43
ARL1-206	ENST00000549302	SLC24A3	Q9HC58	644 aa		12.38	□□□□□ -0.43
ARL1-206	ENST00000549302	MYO3B	Q8WXR4	1341 aa		12.37	□□□□□ -0.43
ARL1-206	ENST00000549302	GPR25	O00155	361 aa		12.37	□□□□□ -0.43
ARL1-206	ENST00000549302	FKTN	O75072	461 aa		12.37	□□□□□ -0.43
ARL1-206	ENST00000549302	TM4SF4	P48230	202 aa		12.37	□□□□□ -0.43
ARL1-206	ENST00000549302	MMP14	P50281	582 aa		12.37	□□□□□ -0.43
ARL1-206	ENST00000549302	PRAMEF18	Q5VWM3	479 aa		12.37	□□□□□ -0.43
ARL1-206	ENST00000549302	FBXO46	Q6PJ61	603 aa	Predicted RBP	12.37	□□□□□ -0.43
ARL1-206	ENST00000549302	GCC1	Q96CN9	775 aa		12.37	□□□□□ -0.43
ARL1-206	ENST00000549302	MBIP	Q9NS73	344 aa		12.37	□□□□□ -0.43
ARL1-206	ENST00000549302	SCAF8	Q9UPN6	1271 aa	Known RBP	12.37	□□□□□ -0.43
ARL1-206	ENST00000549302	ELL2	O00472	640 aa	Predicted RBP	12.36	□□□□□ -0.43

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