RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 ELF2Q15723 593 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 LDHAL6AQ6ZMR3 332 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 HOMER1Q86YM7 354 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 ALG1Q9BT22 464 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 SENP2Q9HC62 589 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 CNNM1Q9NRU3 951 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 TOMM22Q9NS69 142 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 B4E1Z4 1266 aa13.83□□□□□ -0.2
RAPGEF3-219ENST00000549151 UBE2Q2LH0YL09 131 aa13.83□□□□□ -0.2
RAPGEF3-219ENST00000549151 SPECC1Q5M775 1068 aa13.83□□□□□ -0.2
RAPGEF3-219ENST00000549151 MB21D2Q8IYB1 491 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF3-219ENST00000549151 HELBQ8NG08 1087 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF3-219ENST00000549151 KIF18AQ8NI77 898 aa13.83□□□□□ -0.2
RAPGEF3-219ENST00000549151 APPBP2Q92624 585 aa13.83□□□□□ -0.2
RAPGEF3-219ENST00000549151 CLIC6Q96NY7 704 aa13.83□□□□□ -0.2
RAPGEF3-219ENST00000549151 AKAP2Q9Y2D5 859 aa13.83□□□□□ -0.2
RAPGEF3-219ENST00000549151 A0A0G2JS52 829 aa13.83□□□□□ -0.2
RAPGEF3-219ENST00000549151 WDHD1O75717 1129 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF3-219ENST00000549151 SYT10Q6XYQ8 523 aa13.83□□□□□ -0.2
RAPGEF3-219ENST00000549151 ATP2B1P20020 1258 aa13.82□□□□□ -0.2
RAPGEF3-219ENST00000549151 METAP2P50579 478 aaKnown RBP eCLIP13.82□□□□□ -0.2
RAPGEF3-219ENST00000549151 TPM4P67936 248 aa13.82□□□□□ -0.2
RAPGEF3-219ENST00000549151 RBM6P78332 1123 aaKnown RBP13.82□□□□□ -0.2
RAPGEF3-219ENST00000549151 KIF23Q02241 960 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF3-219ENST00000549151 SYKP43405 635 aa13.82□□□□□ -0.2
RAPGEF3-219ENST00000549151 FAM177A1Q8N128 213 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF3-219ENST00000549151 MROH7-TTC4A0A0A0MT08 1334 aa13.82□□□□□ -0.2
RAPGEF3-219ENST00000549151 A0A1W2PQ27 194 aa13.82□□□□□ -0.2
RAPGEF3-219ENST00000549151 A0A1W2PQ64 194 aa13.82□□□□□ -0.2
RAPGEF3-219ENST00000549151 A0A1W2PQD8 194 aa13.82□□□□□ -0.2
RAPGEF3-219ENST00000549151 SERPINC1P01008 464 aa13.82□□□□□ -0.2
RAPGEF3-219ENST00000549151 MCAMP43121 646 aa13.82□□□□□ -0.2
RAPGEF3-219ENST00000549151 PNOCQ13519 176 aa13.82□□□□□ -0.2
RAPGEF3-219ENST00000549151 ARMCX5Q6P1M9 558 aa13.82□□□□□ -0.2
RAPGEF3-219ENST00000549151 CGNQ9P2M7 1197 aaKnown RBP13.82□□□□□ -0.2
RAPGEF3-219ENST00000549151 TMEM94Q12767 1356 aa13.82□□□□□ -0.2
RAPGEF3-219ENST00000549151 CIAO1O76071 339 aa13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 GSDMDP57764 484 aa13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 RRP12Q5JTH9 1297 aaKnown RBP13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 CYB5R4Q7L1T6 521 aa13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 VPS37DQ86XT2 251 aa13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 DNAJC10Q8IXB1 793 aa13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 CHMP4CQ96CF2 233 aa13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 POLR3EQ9NVU0 708 aa13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 YEATS4O95619 227 aa13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 ZFYP08048 801 aaPredicted RBP13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 TCIRG1Q13488 830 aa13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 NYAP1Q6ZVC0 841 aa13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 ZNF771Q7L3S4 317 aaPredicted RBP13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 TBC1D10CQ8IV04 446 aa13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 CFAP100Q494V2 611 aa13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 E4F1Q66K89 784 aaPredicted RBP13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 KRT40Q6A162 431 aa13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 KIF6Q6ZMV9 814 aa13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 BRAPQ7Z569 592 aa13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 GREM2Q9H772 168 aa13.81□□□□□ -0.2
RAPGEF3-219ENST00000549151 PCDH11XQ9BZA7 1347 aa13.8□□□□□ -0.2
RAPGEF3-219ENST00000549151 PCDH11YQ9BZA8 1340 aa13.8□□□□□ -0.2
RAPGEF3-219ENST00000549151 SNAP23O00161 211 aa13.8□□□□□ -0.2
RAPGEF3-219ENST00000549151 NLRP12P59046 1061 aa13.8□□□□□ -0.2
RAPGEF3-219ENST00000549151 FANCCQ00597 558 aa13.8□□□□□ -0.2
RAPGEF3-219ENST00000549151 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.8□□□□□ -0.2
RAPGEF3-219ENST00000549151 TMX1Q9H3N1 280 aa13.8□□□□□ -0.2
RAPGEF3-219ENST00000549151 ITGA6P23229 1130 aa13.8□□□□□ -0.2
RAPGEF3-219ENST00000549151 CDC27P30260 824 aa13.8□□□□□ -0.2
RAPGEF3-219ENST00000549151 AXDND1Q5T1B0 1012 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF3-219ENST00000549151 ANGEL1Q9UNK9 670 aaKnown RBP13.8□□□□□ -0.2
RAPGEF3-219ENST00000549151 NRDCO43847 1150 aa13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 KMT5BQ4FZB7 885 aa13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 DPF2Q92785 391 aa13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 OGFRQ9NZT2 677 aa13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 ASAP1Q9ULH1 1129 aa13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 TRPM3Q9HCF6 1732 aaPredicted RBP13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 EVA1CP58658 441 aa13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 TRIM29Q14134 588 aa13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 LRRN4CLQ8ND94 238 aa13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 PPP1R13BQ96KQ4 1090 aa13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 ZKSCAN3Q9BRR0 538 aa13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 TMOD3Q9NYL9 352 aa13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 ADAMTS7Q9UKP4 1686 aa13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 SLU7O95391 586 aaKnown RBP13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 UBASH3AP57075 661 aa13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 HLFQ16534 295 aa13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 ERCC6LQ2NKX8 1250 aa13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 CPLX2Q6PUV4 134 aaKnown RBP13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 CMTR1Q8N1G2 835 aaKnown RBP13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 FEZ1Q99689 392 aa13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 SLC26A6Q9BXS9 759 aa13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 PIH1D3Q9NQM4 214 aaKnown RBP13.79□□□□□ -0.2
RAPGEF3-219ENST00000549151 ZNF532Q9HCE3 1301 aa13.78□□□□□ -0.2
RAPGEF3-219ENST00000549151 CMA1P23946 247 aa13.78□□□□□ -0.2
RAPGEF3-219ENST00000549151 CTDSPL2Q05D32 466 aa13.78□□□□□ -0.2
RAPGEF3-219ENST00000549151 FBXO38Q6PIJ6 1188 aa13.78□□□□□ -0.2
RAPGEF3-219ENST00000549151 ISCA1Q9BUE6 129 aa13.78□□□□□ -0.2
RAPGEF3-219ENST00000549151 NBPF3Q9H094 633 aa13.78□□□□□ -0.2
RAPGEF3-219ENST00000549151 WWC3Q9ULE0 1092 aa13.78□□□□□ -0.2
RAPGEF3-219ENST00000549151 CAMTA1Q9Y6Y1 1673 aa13.78□□□□□ -0.2
RAPGEF3-219ENST00000549151 NEDD4P46934 1319 aa13.78□□□□□ -0.2
RAPGEF3-219ENST00000549151 GOLGA8AA7E2F4 631 aa13.78□□□□□ -0.2
RAPGEF3-219ENST00000549151 IARSP41252 1262 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms