RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 LDHBP07195 334 aaKnown RBP11.74□□□□□ -0.53
RAB5B-205ENST00000549034 NEFLP07196 543 aa11.74□□□□□ -0.53
RAB5B-205ENST00000549034 SPDYE6P0CI01 402 aa11.74□□□□□ -0.53
RAB5B-205ENST00000549034 MCAMP43121 646 aa11.74□□□□□ -0.53
RAB5B-205ENST00000549034 CFAP100Q494V2 611 aa11.74□□□□□ -0.53
RAB5B-205ENST00000549034 SPDYE2Q495Y8 402 aa11.74□□□□□ -0.53
RAB5B-205ENST00000549034 MAP1SQ66K74 1059 aaPredicted RBP11.74□□□□□ -0.53
RAB5B-205ENST00000549034 SPTY2D1Q68D10 685 aaPredicted RBP11.74□□□□□ -0.53
RAB5B-205ENST00000549034 PI16Q6UXB8 463 aa11.74□□□□□ -0.53
RAB5B-205ENST00000549034 TBC1D9Q6ZT07 1266 aa11.74□□□□□ -0.53
RAB5B-205ENST00000549034 CNTROBQ8N137 903 aa11.74□□□□□ -0.53
RAB5B-205ENST00000549034 ZGPATQ8N5A5 531 aaKnown RBP11.74□□□□□ -0.53
RAB5B-205ENST00000549034 ZC3H15Q8WU90 426 aaKnown RBP11.74□□□□□ -0.53
RAB5B-205ENST00000549034 DCPSQ96C86 337 aaKnown RBP11.74□□□□□ -0.53
RAB5B-205ENST00000549034 ZNF512BQ96KM6 892 aaPredicted RBP11.74□□□□□ -0.53
RAB5B-205ENST00000549034 ZAP70P43403 619 aa11.73□□□□□ -0.53
RAB5B-205ENST00000549034 CRKP46108 304 aa11.73□□□□□ -0.53
RAB5B-205ENST00000549034 C1QTNF8P60827 252 aa11.73□□□□□ -0.53
RAB5B-205ENST00000549034 FSTL1Q12841 308 aa11.73□□□□□ -0.53
RAB5B-205ENST00000549034 NBPF9Q3BBW0 867 aa11.73□□□□□ -0.53
RAB5B-205ENST00000549034 ERICH6Q7L0X2 663 aa11.73□□□□□ -0.53
RAB5B-205ENST00000549034 ARAP2Q8WZ64 1704 aa11.73□□□□□ -0.53
RAB5B-205ENST00000549034 PRMT6Q96LA8 375 aaPredicted RBP11.73□□□□□ -0.53
RAB5B-205ENST00000549034 LRP2BPQ9P2M1 347 aa11.73□□□□□ -0.53
RAB5B-205ENST00000549034 PGAP2Q9UHJ9 254 aa11.73□□□□□ -0.53
RAB5B-205ENST00000549034 SUGT1Q9Y2Z0 365 aa11.73□□□□□ -0.53
RAB5B-205ENST00000549034 PCDHAC2Q9Y5I4 1007 aa11.73□□□□□ -0.53
RAB5B-205ENST00000549034 ZNF646O15015 1829 aaPredicted RBP11.72□□□□□ -0.53
RAB5B-205ENST00000549034 ASTN2O75129 1339 aaPredicted RBP11.72□□□□□ -0.53
RAB5B-205ENST00000549034 SALL1Q9NSC2 1324 aa11.72□□□□□ -0.53
RAB5B-205ENST00000549034 WNT10BO00744 389 aa11.72□□□□□ -0.53
RAB5B-205ENST00000549034 PRDX5P30044 214 aa11.72□□□□□ -0.53
RAB5B-205ENST00000549034 ANGEL2Q5VTE6 544 aaKnown RBP11.72□□□□□ -0.53
RAB5B-205ENST00000549034 USP48Q86UV5 1035 aa11.72□□□□□ -0.53
RAB5B-205ENST00000549034 TEKT1Q969V4 418 aa11.72□□□□□ -0.53
RAB5B-205ENST00000549034 MRIQ9BWK5 157 aa11.72□□□□□ -0.53
RAB5B-205ENST00000549034 BOLA2Q9H3K6 86 aa11.72□□□□□ -0.53
RAB5B-205ENST00000549034 RAI14Q9P0K7 980 aa11.72□□□□□ -0.53
RAB5B-205ENST00000549034 SERPINA10Q9UK55 444 aa11.72□□□□□ -0.53
RAB5B-205ENST00000549034 NDUFB9Q9Y6M9 179 aa11.72□□□□□ -0.53
RAB5B-205ENST00000549034 MAST3O60307 1309 aa11.71□□□□□ -0.53
RAB5B-205ENST00000549034 PDS5AQ29RF7 1337 aaKnown RBP11.71□□□□□ -0.53
RAB5B-205ENST00000549034 MYO1BO43795 1136 aa11.71□□□□□ -0.53
RAB5B-205ENST00000549034 CYP2E1P05181 493 aaPredicted RBP11.71□□□□□ -0.53
RAB5B-205ENST00000549034 HDLBPQ00341 1268 aaKnown RBP11.71□□□□□ -0.53
RAB5B-205ENST00000549034 CDC37L1Q7L3B6 337 aa11.71□□□□□ -0.53
RAB5B-205ENST00000549034 DZIP1Q86YF9 867 aaKnown RBP11.71□□□□□ -0.53
RAB5B-205ENST00000549034 SMC5Q8IY18 1101 aa11.71□□□□□ -0.53
RAB5B-205ENST00000549034 MTMR14Q8NCE2 650 aa11.71□□□□□ -0.53
RAB5B-205ENST00000549034 DNAJC2Q99543 621 aaKnown RBP11.71□□□□□ -0.53
RAB5B-205ENST00000549034 SCAF8Q9UPN6 1271 aaKnown RBP11.71□□□□□ -0.53
RAB5B-205ENST00000549034 COL1A1P02452 1464 aaPredicted RBP11.7□□□□□ -0.54
RAB5B-205ENST00000549034 AKAP11Q9UKA4 1901 aa11.7□□□□□ -0.54
RAB5B-205ENST00000549034 ITGBL1O95965 494 aaPredicted RBP11.7□□□□□ -0.54
RAB5B-205ENST00000549034 ATP5JP18859 108 aa11.7□□□□□ -0.54
RAB5B-205ENST00000549034 HHIPL2Q6UWX4 724 aa11.7□□□□□ -0.54
RAB5B-205ENST00000549034 SULF1Q8IWU6 871 aa11.7□□□□□ -0.54
RAB5B-205ENST00000549034 SLF2Q8IX21 1173 aa11.7□□□□□ -0.54
RAB5B-205ENST00000549034 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.7□□□□□ -0.54
RAB5B-205ENST00000549034 GPATCH3Q96I76 525 aa11.7□□□□□ -0.54
RAB5B-205ENST00000549034 GLIS2Q9BZE0 524 aaPredicted RBP11.7□□□□□ -0.54
RAB5B-205ENST00000549034 ANTXR1Q9H6X2 564 aa11.7□□□□□ -0.54
RAB5B-205ENST00000549034 TDRD3Q9H7E2 651 aaKnown RBP11.7□□□□□ -0.54
RAB5B-205ENST00000549034 ECHDC1Q9NTX5 307 aa11.7□□□□□ -0.54
RAB5B-205ENST00000549034 GGA3Q9NZ52 723 aa11.7□□□□□ -0.54
RAB5B-205ENST00000549034 CLRN2A0PK11 232 aa11.69□□□□□ -0.54
RAB5B-205ENST00000549034 LDHCP07864 332 aa11.69□□□□□ -0.54
RAB5B-205ENST00000549034 GSTO1P78417 241 aa11.69□□□□□ -0.54
RAB5B-205ENST00000549034 MECOMQ03112 1051 aa11.69□□□□□ -0.54
RAB5B-205ENST00000549034 FMR1Q06787 632 aaKnown RBP eCLIP11.69□□□□□ -0.54
RAB5B-205ENST00000549034 TTF1Q15361 905 aaPredicted RBP11.69□□□□□ -0.54
RAB5B-205ENST00000549034 DIXDC1Q155Q3 683 aa11.69□□□□□ -0.54
RAB5B-205ENST00000549034 DLK2Q6UY11 383 aa11.69□□□□□ -0.54
RAB5B-205ENST00000549034 KRT26Q7Z3Y9 468 aa11.69□□□□□ -0.54
RAB5B-205ENST00000549034 CHD1LQ86WJ1 897 aa11.69□□□□□ -0.54
RAB5B-205ENST00000549034 ZBED3Q96IU2 234 aaPredicted RBP11.69□□□□□ -0.54
RAB5B-205ENST00000549034 ZDHHC15Q96MV8 337 aa11.69□□□□□ -0.54
RAB5B-205ENST00000549034 LNPKQ9C0E8 428 aa11.69□□□□□ -0.54
RAB5B-205ENST00000549034 PIH1D3Q9NQM4 214 aaKnown RBP11.69□□□□□ -0.54
RAB5B-205ENST00000549034 ZNF70Q9UC06 446 aaPredicted RBP11.69□□□□□ -0.54
RAB5B-205ENST00000549034 MYH2Q9UKX2 1941 aa11.68□□□□□ -0.54
RAB5B-205ENST00000549034 MYO5AQ9Y4I1 1855 aaKnown RBP11.68□□□□□ -0.54
RAB5B-205ENST00000549034 SPDYE4A6NLX3 237 aa11.68□□□□□ -0.54
RAB5B-205ENST00000549034 GOLIM4O00461 696 aa11.68□□□□□ -0.54
RAB5B-205ENST00000549034 TRAF5O00463 557 aa11.68□□□□□ -0.54
RAB5B-205ENST00000549034 IDH1O75874 414 aaKnown RBP11.68□□□□□ -0.54
RAB5B-205ENST00000549034 NUCB1Q02818 461 aa11.68□□□□□ -0.54
RAB5B-205ENST00000549034 TSHZ3Q63HK5 1081 aa11.68□□□□□ -0.54
RAB5B-205ENST00000549034 OTUD7AQ8TE49 926 aaPredicted RBP11.68□□□□□ -0.54
RAB5B-205ENST00000549034 NSUN4Q96CB9 384 aaKnown RBP11.68□□□□□ -0.54
RAB5B-205ENST00000549034 ZNF408Q9H9D4 720 aa11.68□□□□□ -0.54
RAB5B-205ENST00000549034 VEZTQ9HBM0 779 aa11.68□□□□□ -0.54
RAB5B-205ENST00000549034 USP40Q9NVE5 1235 aa11.68□□□□□ -0.54
RAB5B-205ENST00000549034 TCP10L2B9ZVM9 353 aa11.67□□□□□ -0.54
RAB5B-205ENST00000549034 ADM5C9JUS6 153 aa11.67□□□□□ -0.54
RAB5B-205ENST00000549034 ERC2O15083 957 aa11.67□□□□□ -0.54
RAB5B-205ENST00000549034 MAP4K4O95819 1239 aaPredicted RBP11.67□□□□□ -0.54
RAB5B-205ENST00000549034 MAP3K12Q12852 859 aa11.67□□□□□ -0.54
RAB5B-205ENST00000549034 PRAMEF18Q5VWM3 479 aa11.67□□□□□ -0.54
RAB5B-205ENST00000549034 NAA16Q6N069 864 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms