RNA–Protein interactions for RNA: ENST00000548979.1

SLC38A1-205, Transcript of solute carrier family 38 member 1, humanhuman

TSL 4

Gene SLC38A1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-205ENST00000548979 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.08□□□□□ -0.64
SLC38A1-205ENST00000548979 LINC00116Q8NCU8 138 aa11.08□□□□□ -0.64
SLC38A1-205ENST00000548979 MKRN1Q9UHC7 482 aaKnown RBP11.08□□□□□ -0.64
SLC38A1-205ENST00000548979 KDM6AO15550 1401 aaPredicted RBP11.08□□□□□ -0.64
SLC38A1-205ENST00000548979 C5P01031 1676 aa11.08□□□□□ -0.64
SLC38A1-205ENST00000548979 NEFMP07197 916 aa11.07□□□□□ -0.64
SLC38A1-205ENST00000548979 ITPK1Q13572 414 aa11.07□□□□□ -0.64
SLC38A1-205ENST00000548979 VWA5B2Q8N398 1253 aa11.07□□□□□ -0.64
SLC38A1-205ENST00000548979 CNTNAP4Q9C0A0 1308 aa11.07□□□□□ -0.64
SLC38A1-205ENST00000548979 C4BP0C0L5 1744 aa11.06□□□□□ -0.64
SLC38A1-205ENST00000548979 GNAT3A8MTJ3 354 aa11.06□□□□□ -0.64
SLC38A1-205ENST00000548979 WIPF1O43516 503 aa11.06□□□□□ -0.64
SLC38A1-205ENST00000548979 PTCD1O75127 700 aaKnown RBP11.06□□□□□ -0.64
SLC38A1-205ENST00000548979 RPS6KA4O75676 772 aa11.06□□□□□ -0.64
SLC38A1-205ENST00000548979 C4orf17Q53FE4 359 aa11.06□□□□□ -0.64
SLC38A1-205ENST00000548979 TAS1R3Q7RTX0 852 aa11.06□□□□□ -0.64
SLC38A1-205ENST00000548979 NLGN1Q8N2Q7 840 aa11.06□□□□□ -0.64
SLC38A1-205ENST00000548979 PNNQ9H307 717 aaKnown RBP11.06□□□□□ -0.64
SLC38A1-205ENST00000548979 TAF1LQ8IZX4 1826 aa11.05□□□□□ -0.64
SLC38A1-205ENST00000548979 U2AF1L5P0DN76 240 aaPredicted RBP11.05□□□□□ -0.64
SLC38A1-205ENST00000548979 SMTNP53814 917 aa11.05□□□□□ -0.64
SLC38A1-205ENST00000548979 U2AF1Q01081 240 aaKnown RBP eCLIP11.05□□□□□ -0.64
SLC38A1-205ENST00000548979 TEFQ10587 303 aa11.05□□□□□ -0.64
SLC38A1-205ENST00000548979 TMEM214Q6NUQ4 689 aaKnown RBP11.05□□□□□ -0.64
SLC38A1-205ENST00000548979 LGR6Q9HBX8 967 aa11.05□□□□□ -0.64
SLC38A1-205ENST00000548979 ZNF358Q9NW07 568 aa11.05□□□□□ -0.64
SLC38A1-205ENST00000548979 CD2APQ9Y5K6 639 aa11.05□□□□□ -0.64
SLC38A1-205ENST00000548979 COL3A1P02461 1466 aaPredicted RBP11.05□□□□□ -0.64
SLC38A1-205ENST00000548979 ZNF831Q5JPB2 1677 aa11.04□□□□□ -0.64
SLC38A1-205ENST00000548979 CDC14CA4D256 554 aa11.04□□□□□ -0.64
SLC38A1-205ENST00000548979 YY1P25490 414 aa11.04□□□□□ -0.64
SLC38A1-205ENST00000548979 RFC4P35249 363 aa11.04□□□□□ -0.64
SLC38A1-205ENST00000548979 KRT76Q01546 638 aa11.04□□□□□ -0.64
SLC38A1-205ENST00000548979 RALBP1Q15311 655 aa11.04□□□□□ -0.64
SLC38A1-205ENST00000548979 GPR162Q16538 588 aa11.04□□□□□ -0.64
SLC38A1-205ENST00000548979 TTC5Q8N0Z6 440 aa11.04□□□□□ -0.64
SLC38A1-205ENST00000548979 OGFOD1Q8N543 542 aa11.04□□□□□ -0.64
SLC38A1-205ENST00000548979 NANOS1Q8WY41 292 aaKnown RBP11.04□□□□□ -0.64
SLC38A1-205ENST00000548979 SLC4A9Q96Q91 983 aa11.04□□□□□ -0.64
SLC38A1-205ENST00000548979 GAS2L1Q99501 681 aaPredicted RBP11.04□□□□□ -0.64
SLC38A1-205ENST00000548979 TIMMDC1Q9NPL8 285 aa11.04□□□□□ -0.64
SLC38A1-205ENST00000548979 COL24A1Q17RW2 1714 aa11.04□□□□□ -0.64
SLC38A1-205ENST00000548979 HTATSF1O43719 755 aaKnown RBP11.03□□□□□ -0.64
SLC38A1-205ENST00000548979 GRIN3BO60391 1043 aa11.03□□□□□ -0.64
SLC38A1-205ENST00000548979 DKK1O94907 266 aa11.03□□□□□ -0.64
SLC38A1-205ENST00000548979 PRKAR2BP31323 418 aa11.03□□□□□ -0.64
SLC38A1-205ENST00000548979 ZEB1P37275 1124 aaPredicted RBP11.03□□□□□ -0.64
SLC38A1-205ENST00000548979 DBN1Q16643 649 aa11.03□□□□□ -0.64
SLC38A1-205ENST00000548979 MSL1Q68DK7 614 aa11.03□□□□□ -0.64
SLC38A1-205ENST00000548979 ZNF295-AS1Q8N0V1 137 aa11.03□□□□□ -0.64
SLC38A1-205ENST00000548979 TPCN2Q8NHX9 752 aa11.03□□□□□ -0.64
SLC38A1-205ENST00000548979 RTF1Q92541 710 aaKnown RBP11.03□□□□□ -0.64
SLC38A1-205ENST00000548979 TEX13AQ9BXU3 409 aaPredicted RBP11.03□□□□□ -0.64
SLC38A1-205ENST00000548979 IQSEC3Q9UPP2 1182 aaPredicted RBP11.03□□□□□ -0.64
SLC38A1-205ENST00000548979 DYRK1BQ9Y463 629 aa11.03□□□□□ -0.64
SLC38A1-205ENST00000548979 STARD3NLO95772 234 aa11.02□□□□□ -0.65
SLC38A1-205ENST00000548979 THBS1P07996 1170 aa11.02□□□□□ -0.65
SLC38A1-205ENST00000548979 LMOD1P29536 600 aaPredicted RBP11.02□□□□□ -0.65
SLC38A1-205ENST00000548979 CRKLP46109 303 aaKnown RBP11.02□□□□□ -0.65
SLC38A1-205ENST00000548979 RNFT1Q5M7Z0 435 aa11.02□□□□□ -0.65
SLC38A1-205ENST00000548979 CCDC102BQ68D86 513 aa11.02□□□□□ -0.65
SLC38A1-205ENST00000548979 ZNF594Q96JF6 807 aaPredicted RBP11.02□□□□□ -0.65
SLC38A1-205ENST00000548979 DNAAF2Q9NVR5 837 aaKnown RBP11.02□□□□□ -0.65
SLC38A1-205ENST00000548979 TUBGCP6Q96RT7 1819 aa11.02□□□□□ -0.65
SLC38A1-205ENST00000548979 MRC1P22897 1456 aa11.01□□□□□ -0.65
SLC38A1-205ENST00000548979 SCN11AQ9UI33 1791 aa11.01□□□□□ -0.65
SLC38A1-205ENST00000548979 A6NJY4 79 aa11.01□□□□□ -0.65
SLC38A1-205ENST00000548979 LORP23490 312 aaPredicted RBP11.01□□□□□ -0.65
SLC38A1-205ENST00000548979 MTFR1Q15390 333 aa11.01□□□□□ -0.65
SLC38A1-205ENST00000548979 RIPOR1Q6ZS17 1223 aa11.01□□□□□ -0.65
SLC38A1-205ENST00000548979 AMIGO3Q86WK7 504 aa11.01□□□□□ -0.65
SLC38A1-205ENST00000548979 TRIM50Q86XT4 487 aa11.01□□□□□ -0.65
SLC38A1-205ENST00000548979 IL17REQ8NFR9 667 aa11.01□□□□□ -0.65
SLC38A1-205ENST00000548979 RHBDD1Q8TEB9 315 aa11.01□□□□□ -0.65
SLC38A1-205ENST00000548979 CCDC87Q9NVE4 849 aa11.01□□□□□ -0.65
SLC38A1-205ENST00000548979 UBR3Q6ZT12 1888 aa11.01□□□□□ -0.65
SLC38A1-205ENST00000548979 SLC39A6Q13433 755 aa11□□□□□ -0.65
SLC38A1-205ENST00000548979 CRTC2Q53ET0 693 aaPredicted RBP11□□□□□ -0.65
SLC38A1-205ENST00000548979 WDR44Q5JSH3 913 aa11□□□□□ -0.65
SLC38A1-205ENST00000548979 GNASQ5JWF2 1037 aa11□□□□□ -0.65
SLC38A1-205ENST00000548979 TBCELQ5QJ74 424 aa11□□□□□ -0.65
SLC38A1-205ENST00000548979 TNS4Q8IZW8 715 aa11□□□□□ -0.65
SLC38A1-205ENST00000548979 GPAMQ9HCL2 828 aa11□□□□□ -0.65
SLC38A1-205ENST00000548979 SFI1A8K8P3 1242 aa10.99□□□□□ -0.65
SLC38A1-205ENST00000548979 MMP10P09238 476 aa10.99□□□□□ -0.65
SLC38A1-205ENST00000548979 CYP19A1P11511 503 aaPredicted RBP10.99□□□□□ -0.65
SLC38A1-205ENST00000548979 RASA1P20936 1047 aa10.99□□□□□ -0.65
SLC38A1-205ENST00000548979 PLA2G4AP47712 749 aa10.99□□□□□ -0.65
SLC38A1-205ENST00000548979 EPHA4P54764 986 aa10.99□□□□□ -0.65
SLC38A1-205ENST00000548979 INTS5Q6P9B9 1019 aaKnown RBP10.99□□□□□ -0.65
SLC38A1-205ENST00000548979 ZNF790Q6PG37 636 aa10.99□□□□□ -0.65
SLC38A1-205ENST00000548979 NPM2Q86SE8 214 aaKnown RBP10.99□□□□□ -0.65
SLC38A1-205ENST00000548979 DNAJC10Q8IXB1 793 aa10.99□□□□□ -0.65
SLC38A1-205ENST00000548979 ZNF837Q96EG3 531 aaPredicted RBP10.99□□□□□ -0.65
SLC38A1-205ENST00000548979 PHACTR3Q96KR7 559 aa10.99□□□□□ -0.65
SLC38A1-205ENST00000548979 FMNL2Q96PY5 1086 aa10.99□□□□□ -0.65
SLC38A1-205ENST00000548979 PARP3Q9Y6F1 533 aa10.99□□□□□ -0.65
SLC38A1-205ENST00000548979 CEMIPQ8WUJ3 1361 aa10.99□□□□□ -0.65
SLC38A1-205ENST00000548979 A0A087WZG4 1122 aa10.98□□□□□ -0.65
SLC38A1-205ENST00000548979 BTBD11A6QL63 1104 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms