RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 GOLGA8FQ08AF8 430 aa15.89■□□□□ 0.13
HDAC7-228ENST00000548938 GOLGA8DPQ0D2H9 430 aa15.89■□□□□ 0.13
HDAC7-228ENST00000548938 PTPN21Q16825 1174 aa15.89■□□□□ 0.13
HDAC7-228ENST00000548938 TRIM65Q6PJ69 517 aa15.89■□□□□ 0.13
HDAC7-228ENST00000548938 UBXN4Q92575 508 aa15.89■□□□□ 0.13
HDAC7-228ENST00000548938 A0A087WZG4 1122 aa15.88■□□□□ 0.13
HDAC7-228ENST00000548938 KIF28PB7ZC32 967 aa15.88■□□□□ 0.13
HDAC7-228ENST00000548938 FAM193AP78312 1265 aa15.88■□□□□ 0.13
HDAC7-228ENST00000548938 IRX5P78411 483 aaPredicted RBP15.88■□□□□ 0.13
HDAC7-228ENST00000548938 IFNL2Q8IZJ0 200 aa15.88■□□□□ 0.13
HDAC7-228ENST00000548938 WDR17Q8IZU2 1322 aa15.88■□□□□ 0.13
HDAC7-228ENST00000548938 ADAMTS7Q9UKP4 1686 aa15.88■□□□□ 0.13
HDAC7-228ENST00000548938 TIMM10P62072 90 aa15.88■□□□□ 0.13
HDAC7-228ENST00000548938 AXDND1Q5T1B0 1012 aaPredicted RBP15.88■□□□□ 0.13
HDAC7-228ENST00000548938 LMBR1LQ6UX01 489 aa15.88■□□□□ 0.13
HDAC7-228ENST00000548938 LRP10Q7Z4F1 713 aa15.88■□□□□ 0.13
HDAC7-228ENST00000548938 CREBRFQ8IUR6 639 aa15.88■□□□□ 0.13
HDAC7-228ENST00000548938 FBXO18Q8NFZ0 1043 aa15.88■□□□□ 0.13
HDAC7-228ENST00000548938 M0R2C6 588 aa15.88■□□□□ 0.13
HDAC7-228ENST00000548938 TADA3O75528 432 aa15.88■□□□□ 0.13
HDAC7-228ENST00000548938 URI1O94763 535 aaPredicted RBP15.88■□□□□ 0.13
HDAC7-228ENST00000548938 TUBB4AP04350 444 aa15.88■□□□□ 0.13
HDAC7-228ENST00000548938 TMCO3Q6UWJ1 677 aa15.88■□□□□ 0.13
HDAC7-228ENST00000548938 MNS1Q8NEH6 495 aa15.88■□□□□ 0.13
HDAC7-228ENST00000548938 ZNF496Q96IT1 587 aaPredicted RBP15.88■□□□□ 0.13
HDAC7-228ENST00000548938 CALCOCO1Q9P1Z2 691 aa15.88■□□□□ 0.13
HDAC7-228ENST00000548938 IKBKBO14920 756 aa15.87■□□□□ 0.13
HDAC7-228ENST00000548938 SEC31AO94979 1220 aaKnown RBP15.87■□□□□ 0.13
HDAC7-228ENST00000548938 HAND2P61296 217 aa15.87■□□□□ 0.13
HDAC7-228ENST00000548938 TOM1L2Q6ZVM7 507 aa15.87■□□□□ 0.13
HDAC7-228ENST00000548938 CARD6Q9BX69 1037 aa15.87■□□□□ 0.13
HDAC7-228ENST00000548938 SLC52A2Q9HAB3 445 aa15.87■□□□□ 0.13
HDAC7-228ENST00000548938 AFDNP55196 1824 aaKnown RBP15.87■□□□□ 0.13
HDAC7-228ENST00000548938 GOLGA8BA8MQT2 603 aa15.87■□□□□ 0.13
HDAC7-228ENST00000548938 MARCKSP29966 332 aaPredicted RBP15.87■□□□□ 0.13
HDAC7-228ENST00000548938 DHX8Q14562 1220 aaKnown RBP15.87■□□□□ 0.13
HDAC7-228ENST00000548938 ANO1Q5XXA6 986 aa15.87■□□□□ 0.13
HDAC7-228ENST00000548938 ARGLU1Q9NWB6 273 aaPredicted RBP15.87■□□□□ 0.13
HDAC7-228ENST00000548938 NHSL1Q5SYE7 1610 aa15.86■□□□□ 0.13
HDAC7-228ENST00000548938 COL5A2P05997 1499 aaPredicted RBP15.86■□□□□ 0.13
HDAC7-228ENST00000548938 WDHD1O75717 1129 aaPredicted RBP15.86■□□□□ 0.13
HDAC7-228ENST00000548938 EVCP57679 992 aa15.86■□□□□ 0.13
HDAC7-228ENST00000548938 ATG9AQ7Z3C6 839 aa15.86■□□□□ 0.13
HDAC7-228ENST00000548938 REXO1L1PQ8IX06 675 aa15.86■□□□□ 0.13
HDAC7-228ENST00000548938 NFATC2IPQ8NCF5 419 aa15.86■□□□□ 0.13
HDAC7-228ENST00000548938 UTP14AQ9BVJ6 771 aaKnown RBP15.86■□□□□ 0.13
HDAC7-228ENST00000548938 EPC1Q9H2F5 836 aa15.86■□□□□ 0.13
HDAC7-228ENST00000548938 PLEKHG2Q9H7P9 1386 aa15.86■□□□□ 0.13
HDAC7-228ENST00000548938 KLF18A0A0U1RQI7 1052 aa15.86■□□□□ 0.13
HDAC7-228ENST00000548938 POLR3GO15318 223 aaPredicted RBP15.86■□□□□ 0.13
HDAC7-228ENST00000548938 CCP110O43303 1012 aa15.86■□□□□ 0.13
HDAC7-228ENST00000548938 CMA1P23946 247 aa15.86■□□□□ 0.13
HDAC7-228ENST00000548938 CASP7P55210 303 aa15.86■□□□□ 0.13
HDAC7-228ENST00000548938 UBASH3AP57075 661 aa15.86■□□□□ 0.13
HDAC7-228ENST00000548938 SYNE3Q6ZMZ3 975 aa15.86■□□□□ 0.13
HDAC7-228ENST00000548938 BRAPQ7Z569 592 aa15.86■□□□□ 0.13
HDAC7-228ENST00000548938 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.86■□□□□ 0.13
HDAC7-228ENST00000548938 HPS5Q9UPZ3 1129 aa15.86■□□□□ 0.13
HDAC7-228ENST00000548938 PARP3Q9Y6F1 533 aa15.86■□□□□ 0.13
HDAC7-228ENST00000548938 TMEM232C9JQI7 657 aa15.85■□□□□ 0.13
HDAC7-228ENST00000548938 RNF113AO15541 343 aaKnown RBP15.85■□□□□ 0.13
HDAC7-228ENST00000548938 SERPINC1P01008 464 aa15.85■□□□□ 0.13
HDAC7-228ENST00000548938 KIF23Q02241 960 aaPredicted RBP15.85■□□□□ 0.13
HDAC7-228ENST00000548938 CFAP100Q494V2 611 aa15.85■□□□□ 0.13
HDAC7-228ENST00000548938 FAM177A1Q8N128 213 aaPredicted RBP15.85■□□□□ 0.13
HDAC7-228ENST00000548938 OSBP2Q969R2 916 aa15.85■□□□□ 0.13
HDAC7-228ENST00000548938 CHMP4CQ96CF2 233 aa15.85■□□□□ 0.13
HDAC7-228ENST00000548938 DCAF5Q96JK2 942 aa15.85■□□□□ 0.13
HDAC7-228ENST00000548938 TMX1Q9H3N1 280 aa15.85■□□□□ 0.13
HDAC7-228ENST00000548938 MYL5Q02045 173 aa15.84■□□□□ 0.13
HDAC7-228ENST00000548938 FOXP2O15409 715 aa15.84■□□□□ 0.13
HDAC7-228ENST00000548938 PRC1O43663 620 aa15.84■□□□□ 0.13
HDAC7-228ENST00000548938 IFIT1P09914 478 aaKnown RBP15.84■□□□□ 0.13
HDAC7-228ENST00000548938 SYKP43405 635 aa15.84■□□□□ 0.13
HDAC7-228ENST00000548938 HNRNPH2P55795 449 aaKnown RBP15.84■□□□□ 0.13
HDAC7-228ENST00000548938 LRRFIP1Q32MZ4 808 aaKnown RBP15.84■□□□□ 0.13
HDAC7-228ENST00000548938 FBXL16Q8N461 479 aa15.84■□□□□ 0.13
HDAC7-228ENST00000548938 TUBE1Q9UJT0 475 aa15.84■□□□□ 0.13
HDAC7-228ENST00000548938 TAOK2Q9UL54 1235 aa15.84■□□□□ 0.13
HDAC7-228ENST00000548938 ABCA3Q99758 1704 aa15.84■□□□□ 0.13
HDAC7-228ENST00000548938 VWA3AA6NCI4 1184 aa15.83■□□□□ 0.13
HDAC7-228ENST00000548938 EFCAB8A8MWE9 144 aa15.83■□□□□ 0.13
HDAC7-228ENST00000548938 PNOCQ13519 176 aa15.83■□□□□ 0.13
HDAC7-228ENST00000548938 TAF7LQ5H9L4 462 aa15.83■□□□□ 0.13
HDAC7-228ENST00000548938 VSTM4Q8IW00 320 aa15.83■□□□□ 0.13
HDAC7-228ENST00000548938 SRRTQ9BXP5 876 aaKnown RBP15.83■□□□□ 0.13
HDAC7-228ENST00000548938 STRN4Q9NRL3 753 aa15.83■□□□□ 0.13
HDAC7-228ENST00000548938 CPLX1O14810 134 aa15.83■□□□□ 0.12
HDAC7-228ENST00000548938 SASH3O75995 380 aa15.83■□□□□ 0.12
HDAC7-228ENST00000548938 NEK11Q8NG66 645 aa15.83■□□□□ 0.12
HDAC7-228ENST00000548938 TRERF1Q96PN7 1200 aa15.83■□□□□ 0.12
HDAC7-228ENST00000548938 CBFA2T2O43439 604 aa15.82■□□□□ 0.12
HDAC7-228ENST00000548938 FOXO4P98177 505 aa15.82■□□□□ 0.12
HDAC7-228ENST00000548938 TMEM139Q8IV31 216 aa15.82■□□□□ 0.12
HDAC7-228ENST00000548938 AIFM3Q96NN9 605 aa15.82■□□□□ 0.12
HDAC7-228ENST00000548938 CARD10Q9BWT7 1032 aa15.82■□□□□ 0.12
HDAC7-228ENST00000548938 SCN11AQ9UI33 1791 aa15.82■□□□□ 0.12
HDAC7-228ENST00000548938 ARFGEF2Q9Y6D5 1785 aa15.82■□□□□ 0.12
HDAC7-228ENST00000548938 DHX16O60231 1041 aaKnown RBP15.82■□□□□ 0.12
HDAC7-228ENST00000548938 TOP1P11387 765 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms