RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 PRMT2P55345 433 aa17.23■□□□□ 0.35
CDX2-202ENST00000548877 FKBP5Q13451 457 aaPredicted RBP17.23■□□□□ 0.35
CDX2-202ENST00000548877 NCBP3Q53F19 620 aaKnown RBP17.23■□□□□ 0.35
CDX2-202ENST00000548877 DZIP1LQ8IYY4 767 aaKnown RBP17.23■□□□□ 0.35
CDX2-202ENST00000548877 CNKSR2Q8WXI2 1034 aa17.23■□□□□ 0.35
CDX2-202ENST00000548877 TDRD3Q9H7E2 651 aaKnown RBP17.23■□□□□ 0.35
CDX2-202ENST00000548877 TTF2Q9UNY4 1162 aaKnown RBP17.23■□□□□ 0.35
CDX2-202ENST00000548877 SZT2Q5T011 3432 aa17.22■□□□□ 0.35
CDX2-202ENST00000548877 SPDYE5A6NIY4 337 aa17.22■□□□□ 0.35
CDX2-202ENST00000548877 UBE4AQ14139 1066 aa17.22■□□□□ 0.35
CDX2-202ENST00000548877 SLC4A8Q2Y0W8 1093 aa17.22■□□□□ 0.35
CDX2-202ENST00000548877 MFSD14BQ5SR56 506 aa17.22■□□□□ 0.35
CDX2-202ENST00000548877 CDAN1Q8IWY9 1227 aa17.22■□□□□ 0.35
CDX2-202ENST00000548877 JAG2Q9Y219 1238 aa17.22■□□□□ 0.35
CDX2-202ENST00000548877 CSADQ9Y600 493 aa17.22■□□□□ 0.35
CDX2-202ENST00000548877 H0YGN5 161 aa17.21■□□□□ 0.35
CDX2-202ENST00000548877 TNNI2P48788 182 aa17.21■□□□□ 0.35
CDX2-202ENST00000548877 LACTBP83111 547 aaPredicted RBP17.21■□□□□ 0.35
CDX2-202ENST00000548877 HDLBPQ00341 1268 aaKnown RBP17.21■□□□□ 0.35
CDX2-202ENST00000548877 BEND3Q5T5X7 828 aa17.21■□□□□ 0.35
CDX2-202ENST00000548877 LDHAL6AQ6ZMR3 332 aa17.21■□□□□ 0.35
CDX2-202ENST00000548877 WWC1Q8IX03 1113 aa17.21■□□□□ 0.35
CDX2-202ENST00000548877 ZSWIM8A7E2V4 1837 aa17.2■□□□□ 0.34
CDX2-202ENST00000548877 WDHD1O75717 1129 aaPredicted RBP17.2■□□□□ 0.34
CDX2-202ENST00000548877 CETPP11597 493 aa17.2■□□□□ 0.34
CDX2-202ENST00000548877 HIBADHP31937 336 aaKnown RBP17.2■□□□□ 0.34
CDX2-202ENST00000548877 CRKP46108 304 aa17.2■□□□□ 0.34
CDX2-202ENST00000548877 CCDC57Q2TAC2 916 aa17.2■□□□□ 0.34
CDX2-202ENST00000548877 LMBR1LQ6UX01 489 aa17.2■□□□□ 0.34
CDX2-202ENST00000548877 FAM84BQ96KN1 310 aaPredicted RBP17.2■□□□□ 0.34
CDX2-202ENST00000548877 TMEM39BQ9GZU3 492 aa17.2■□□□□ 0.34
CDX2-202ENST00000548877 KIF22Q14807 665 aa17.19■□□□□ 0.34
CDX2-202ENST00000548877 EPHA10Q5JZY3 1008 aa17.19■□□□□ 0.34
CDX2-202ENST00000548877 ERO1BQ86YB8 467 aa17.19■□□□□ 0.34
CDX2-202ENST00000548877 ZNF594Q96JF6 807 aaPredicted RBP17.19■□□□□ 0.34
CDX2-202ENST00000548877 MRIQ9BWK5 157 aa17.19■□□□□ 0.34
CDX2-202ENST00000548877 SNCAIPQ9Y6H5 919 aa17.19■□□□□ 0.34
CDX2-202ENST00000548877 RANBP2P49792 3224 aaKnown RBP17.18■□□□□ 0.34
CDX2-202ENST00000548877 TCP10L2B9ZVM9 353 aa17.18■□□□□ 0.34
CDX2-202ENST00000548877 BTBD19C9JJ37 291 aa17.18■□□□□ 0.34
CDX2-202ENST00000548877 VAMP4O75379 141 aa17.18■□□□□ 0.34
CDX2-202ENST00000548877 FKBP1CQ5VVH2 108 aa17.18■□□□□ 0.34
CDX2-202ENST00000548877 FAM83AQ86UY5 434 aa17.18■□□□□ 0.34
CDX2-202ENST00000548877 SH3TC2Q8TF17 1288 aa17.18■□□□□ 0.34
CDX2-202ENST00000548877 ARHGAP39Q9C0H5 1083 aa17.18■□□□□ 0.34
CDX2-202ENST00000548877 CNNM1Q9NRU3 951 aa17.18■□□□□ 0.34
CDX2-202ENST00000548877 GRM8O00222 908 aa17.17■□□□□ 0.34
CDX2-202ENST00000548877 GYG1P46976 350 aa17.17■□□□□ 0.34
CDX2-202ENST00000548877 PPIL2Q13356 520 aa17.17■□□□□ 0.34
CDX2-202ENST00000548877 SNAPC2Q13487 334 aa17.17■□□□□ 0.34
CDX2-202ENST00000548877 C17orf99Q6UX52 265 aa17.17■□□□□ 0.34
CDX2-202ENST00000548877 FBXO33Q7Z6M2 555 aa17.17■□□□□ 0.34
CDX2-202ENST00000548877 UBE2Q1Q7Z7E8 422 aa17.17■□□□□ 0.34
CDX2-202ENST00000548877 SHISA4Q96DD7 197 aa17.17■□□□□ 0.34
CDX2-202ENST00000548877 CHMP3Q9Y3E7 222 aa17.17■□□□□ 0.34
CDX2-202ENST00000548877 IRF6O14896 467 aa17.16■□□□□ 0.34
CDX2-202ENST00000548877 PLIN1O60240 522 aa17.16■□□□□ 0.34
CDX2-202ENST00000548877 TAF7LQ5H9L4 462 aa17.16■□□□□ 0.34
CDX2-202ENST00000548877 DIEXFQ68CQ4 756 aaKnown RBP17.16■□□□□ 0.34
CDX2-202ENST00000548877 TBC1D22AQ8WUA7 517 aa17.16■□□□□ 0.34
CDX2-202ENST00000548877 HOOK2Q96ED9 719 aa17.16■□□□□ 0.34
CDX2-202ENST00000548877 PRO3102Q9H379 93 aa17.16■□□□□ 0.34
CDX2-202ENST00000548877 RPAP1Q9BWH6 1393 aaPredicted RBP17.15■□□□□ 0.34
CDX2-202ENST00000548877 GRIK5Q16478 980 aa17.15■□□□□ 0.34
CDX2-202ENST00000548877 NKX2-3Q8TAU0 364 aa17.15■□□□□ 0.34
CDX2-202ENST00000548877 ZDHHC15Q96MV8 337 aa17.15■□□□□ 0.34
CDX2-202ENST00000548877 SRRDQ9UH36 339 aa17.15■□□□□ 0.34
CDX2-202ENST00000548877 RIPOR2Q9Y4F9 1068 aa17.15■□□□□ 0.34
CDX2-202ENST00000548877 F6X3S4 739 aa17.14■□□□□ 0.33
CDX2-202ENST00000548877 PPATQ06203 517 aa17.14■□□□□ 0.33
CDX2-202ENST00000548877 WRNIP1Q96S55 665 aa17.14■□□□□ 0.33
CDX2-202ENST00000548877 ADGRA2Q96PE1 1338 aa17.14■□□□□ 0.33
CDX2-202ENST00000548877 FANCIQ9NVI1 1328 aa17.14■□□□□ 0.33
CDX2-202ENST00000548877 ALDH1L1O75891 902 aa17.13■□□□□ 0.33
CDX2-202ENST00000548877 GJB1P08034 283 aa17.13■□□□□ 0.33
CDX2-202ENST00000548877 CTGFP29279 349 aa17.13■□□□□ 0.33
CDX2-202ENST00000548877 GJA8P48165 433 aa17.13■□□□□ 0.33
CDX2-202ENST00000548877 MTFR1Q15390 333 aa17.13■□□□□ 0.33
CDX2-202ENST00000548877 CHRDL2Q6WN34 429 aa17.13■□□□□ 0.33
CDX2-202ENST00000548877 ANKRD23Q86SG2 305 aa17.13■□□□□ 0.33
CDX2-202ENST00000548877 ZKSCAN4Q969J2 545 aaPredicted RBP17.13■□□□□ 0.33
CDX2-202ENST00000548877 TEKT1Q969V4 418 aa17.13■□□□□ 0.33
CDX2-202ENST00000548877 RBM27Q9P2N5 1060 aaKnown RBP17.13■□□□□ 0.33
CDX2-202ENST00000548877 SUGT1Q9Y2Z0 365 aa17.13■□□□□ 0.33
CDX2-202ENST00000548877 MROH5Q6ZUA9 1318 aa17.13■□□□□ 0.33
CDX2-202ENST00000548877 MYCP01106 439 aaPredicted RBP17.12■□□□□ 0.33
CDX2-202ENST00000548877 HOXD10P28358 340 aa17.12■□□□□ 0.33
CDX2-202ENST00000548877 DCAF15Q66K64 600 aa17.12■□□□□ 0.33
CDX2-202ENST00000548877 APOBEC3HQ6NTF7 200 aaKnown RBP17.12■□□□□ 0.33
CDX2-202ENST00000548877 KAZALD1Q96I82 304 aa17.12■□□□□ 0.33
CDX2-202ENST00000548877 TRIM47Q96LD4 638 aa17.12■□□□□ 0.33
CDX2-202ENST00000548877 PUS3Q9BZE2 481 aaKnown RBP17.12■□□□□ 0.33
CDX2-202ENST00000548877 KCNH4Q9UQ05 1017 aa17.12■□□□□ 0.33
CDX2-202ENST00000548877 OSBPP22059 807 aa17.11■□□□□ 0.33
CDX2-202ENST00000548877 GRK4P32298 578 aa17.11■□□□□ 0.33
CDX2-202ENST00000548877 PSMC4P43686 418 aa17.11■□□□□ 0.33
CDX2-202ENST00000548877 HHIPL2Q6UWX4 724 aa17.11■□□□□ 0.33
CDX2-202ENST00000548877 WDR63Q8IWG1 891 aa17.11■□□□□ 0.33
CDX2-202ENST00000548877 ZNF341Q9BYN7 854 aa17.11■□□□□ 0.33
CDX2-202ENST00000548877 TMOD2Q9NZR1 351 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms