RNA–Protein interactions for RNA: ENST00000548640.5

TMEM106C-209, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-209ENST00000548640 ZBTB22O15209 634 aa16.45■□□□□ 0.22
TMEM106C-209ENST00000548640 PDIA3P30101 505 aaKnown RBP16.45■□□□□ 0.22
TMEM106C-209ENST00000548640 NASPP49321 788 aaPredicted RBP16.45■□□□□ 0.22
TMEM106C-209ENST00000548640 KCNQ4P56696 695 aa16.45■□□□□ 0.22
TMEM106C-209ENST00000548640 DNM1Q05193 864 aaKnown RBP16.45■□□□□ 0.22
TMEM106C-209ENST00000548640 COL9A3Q14050 684 aaPredicted RBP16.45■□□□□ 0.22
TMEM106C-209ENST00000548640 SLC27A3Q5K4L6 730 aa16.45■□□□□ 0.22
TMEM106C-209ENST00000548640 ATL3Q6DD88 541 aa16.45■□□□□ 0.22
TMEM106C-209ENST00000548640 CPLX2Q6PUV4 134 aaKnown RBP16.45■□□□□ 0.22
TMEM106C-209ENST00000548640 FAM196AQ6ZSG2 479 aa16.45■□□□□ 0.22
TMEM106C-209ENST00000548640 GAS2L3Q86XJ1 694 aa16.45■□□□□ 0.22
TMEM106C-209ENST00000548640 RGS22Q8NE09 1264 aa16.45■□□□□ 0.22
TMEM106C-209ENST00000548640 KRT23Q9C075 422 aa16.45■□□□□ 0.22
TMEM106C-209ENST00000548640 RBM27Q9P2N5 1060 aaKnown RBP16.45■□□□□ 0.22
TMEM106C-209ENST00000548640 A0A1B0GUL6 1792 aa16.44■□□□□ 0.22
TMEM106C-209ENST00000548640 JAK2O60674 1132 aa16.44■□□□□ 0.22
TMEM106C-209ENST00000548640 CDKL5O76039 1030 aa16.44■□□□□ 0.22
TMEM106C-209ENST00000548640 PTF1AQ7RTS3 328 aa16.44■□□□□ 0.22
TMEM106C-209ENST00000548640 CHAMP1Q96JM3 812 aa16.44■□□□□ 0.22
TMEM106C-209ENST00000548640 RNF41Q9H4P4 317 aaPredicted RBP16.44■□□□□ 0.22
TMEM106C-209ENST00000548640 GDPD2Q9HCC8 539 aa16.44■□□□□ 0.22
TMEM106C-209ENST00000548640 KLF18A0A0U1RQI7 1052 aa16.43■□□□□ 0.22
TMEM106C-209ENST00000548640 GOLGA6L4A6NEF3 574 aa16.43■□□□□ 0.22
TMEM106C-209ENST00000548640 GOLGA8BA8MQT2 603 aa16.43■□□□□ 0.22
TMEM106C-209ENST00000548640 CPLX1O14810 134 aa16.43■□□□□ 0.22
TMEM106C-209ENST00000548640 CYP7A1P22680 504 aa16.43■□□□□ 0.22
TMEM106C-209ENST00000548640 TDO2P48775 406 aa16.43■□□□□ 0.22
TMEM106C-209ENST00000548640 CCDC173Q0VFZ6 552 aa16.43■□□□□ 0.22
TMEM106C-209ENST00000548640 AEBP2Q6ZN18 517 aaPredicted RBP16.43■□□□□ 0.22
TMEM106C-209ENST00000548640 C3orf67Q6ZVT6 689 aa16.43■□□□□ 0.22
TMEM106C-209ENST00000548640 IFNL3Q8IZI9 196 aa16.43■□□□□ 0.22
TMEM106C-209ENST00000548640 MTA3Q9BTC8 594 aa16.43■□□□□ 0.22
TMEM106C-209ENST00000548640 TSPY26PQ9H489 355 aa16.43■□□□□ 0.22
TMEM106C-209ENST00000548640 RAI14Q9P0K7 980 aa16.43■□□□□ 0.22
TMEM106C-209ENST00000548640 CFAP45Q9UL16 551 aa16.43■□□□□ 0.22
TMEM106C-209ENST00000548640 ANGEL1Q9UNK9 670 aaKnown RBP16.43■□□□□ 0.22
TMEM106C-209ENST00000548640 TIAM2Q8IVF5 1701 aa16.42■□□□□ 0.22
TMEM106C-209ENST00000548640 A0A0G2JLW4 131 aa16.42■□□□□ 0.22
TMEM106C-209ENST00000548640 GADD45BO75293 160 aaPredicted RBP16.42■□□□□ 0.22
TMEM106C-209ENST00000548640 CCT2P78371 535 aaKnown RBP16.42■□□□□ 0.22
TMEM106C-209ENST00000548640 RESTQ13127 1097 aa16.42■□□□□ 0.22
TMEM106C-209ENST00000548640 SART3Q15020 963 aaKnown RBP16.42■□□□□ 0.22
TMEM106C-209ENST00000548640 CNBD1Q8NA66 436 aa16.42■□□□□ 0.22
TMEM106C-209ENST00000548640 CELF1Q92879 486 aaKnown RBP16.42■□□□□ 0.22
TMEM106C-209ENST00000548640 DDX11Q96FC9 970 aa16.42■□□□□ 0.22
TMEM106C-209ENST00000548640 ZNF396Q96N95 335 aaPredicted RBP16.42■□□□□ 0.22
TMEM106C-209ENST00000548640 QTRT2Q9H974 415 aaKnown RBP16.42■□□□□ 0.22
TMEM106C-209ENST00000548640 ARMT1Q9H993 441 aa16.42■□□□□ 0.22
TMEM106C-209ENST00000548640 SLC4A4Q9Y6R1 1079 aa16.42■□□□□ 0.22
TMEM106C-209ENST00000548640 C4AP0C0L4 1744 aa16.42■□□□□ 0.22
TMEM106C-209ENST00000548640 MAGEB6P1A0A0J9YX57 407 aa16.41■□□□□ 0.22
TMEM106C-209ENST00000548640 SYCE3A1L190 88 aa16.41■□□□□ 0.22
TMEM106C-209ENST00000548640 SNAP23O00161 211 aa16.41■□□□□ 0.22
TMEM106C-209ENST00000548640 GYG1P46976 350 aa16.41■□□□□ 0.22
TMEM106C-209ENST00000548640 SPTY2D1Q68D10 685 aaPredicted RBP16.41■□□□□ 0.22
TMEM106C-209ENST00000548640 FBXO33Q7Z6M2 555 aa16.41■□□□□ 0.22
TMEM106C-209ENST00000548640 FERMT3Q86UX7 667 aa16.41■□□□□ 0.22
TMEM106C-209ENST00000548640 TBC1D10CQ8IV04 446 aa16.41■□□□□ 0.22
TMEM106C-209ENST00000548640 SPATA32Q96LK8 384 aa16.41■□□□□ 0.22
TMEM106C-209ENST00000548640 SALL1Q9NSC2 1324 aa16.41■□□□□ 0.22
TMEM106C-209ENST00000548640 CASZ1Q86V15 1759 aa16.41■□□□□ 0.22
TMEM106C-209ENST00000548640 SH2B2O14492 632 aaPredicted RBP16.4■□□□□ 0.22
TMEM106C-209ENST00000548640 HIBADHP31937 336 aaKnown RBP16.4■□□□□ 0.22
TMEM106C-209ENST00000548640 ANTXR2P58335 489 aa16.4■□□□□ 0.22
TMEM106C-209ENST00000548640 ST5P78524 1137 aa16.4■□□□□ 0.22
TMEM106C-209ENST00000548640 AKNAD1Q5T1N1 836 aa16.4■□□□□ 0.22
TMEM106C-209ENST00000548640 FAM182BQ5T319 152 aa16.4■□□□□ 0.22
TMEM106C-209ENST00000548640 SYNE3Q6ZMZ3 975 aa16.4■□□□□ 0.22
TMEM106C-209ENST00000548640 MFSD6Q6ZSS7 791 aa16.4■□□□□ 0.22
TMEM106C-209ENST00000548640 CHST3Q7LGC8 479 aa16.4■□□□□ 0.22
TMEM106C-209ENST00000548640 ABCF2Q9UG63 623 aa16.4■□□□□ 0.22
TMEM106C-209ENST00000548640 NSFL1CQ9UNZ2 370 aaKnown RBP16.4■□□□□ 0.22
TMEM106C-209ENST00000548640 ERICH2A1L162 156 aa16.39■□□□□ 0.21
TMEM106C-209ENST00000548640 GSG1L2A8MUP6 293 aa16.39■□□□□ 0.21
TMEM106C-209ENST00000548640 CTDNEP1O95476 244 aa16.39■□□□□ 0.21
TMEM106C-209ENST00000548640 PCP11498 1178 aaKnown RBP16.39■□□□□ 0.21
TMEM106C-209ENST00000548640 GRAPQ13588 217 aa16.39■□□□□ 0.21
TMEM106C-209ENST00000548640 GIMAP6Q6P9H5 292 aa16.39■□□□□ 0.21
TMEM106C-209ENST00000548640 NFXL1Q6ZNB6 911 aa16.39■□□□□ 0.21
TMEM106C-209ENST00000548640 KRT27Q7Z3Y8 459 aa16.39■□□□□ 0.21
TMEM106C-209ENST00000548640 GRAPLQ8TC17 118 aaPredicted RBP16.39■□□□□ 0.21
TMEM106C-209ENST00000548640 STAG1Q8WVM7 1258 aa16.39■□□□□ 0.21
TMEM106C-209ENST00000548640 TRIM44Q96DX7 344 aaPredicted RBP16.39■□□□□ 0.21
TMEM106C-209ENST00000548640 FAM84BQ96KN1 310 aaPredicted RBP16.39■□□□□ 0.21
TMEM106C-209ENST00000548640 PANK2Q9BZ23 570 aa16.39■□□□□ 0.21
TMEM106C-209ENST00000548640 EPB41L4AQ9HCS5 686 aaPredicted RBP16.39■□□□□ 0.21
TMEM106C-209ENST00000548640 LEMD3Q9Y2U8 911 aa16.39■□□□□ 0.21
TMEM106C-209ENST00000548640 LIFRP42702 1097 aa16.38■□□□□ 0.21
TMEM106C-209ENST00000548640 METAP2P50579 478 aaKnown RBP eCLIP16.38■□□□□ 0.21
TMEM106C-209ENST00000548640 NFIXQ14938 502 aa16.38■□□□□ 0.21
TMEM106C-209ENST00000548640 TMEM67Q5HYA8 995 aa16.38■□□□□ 0.21
TMEM106C-209ENST00000548640 TMTC2Q8N394 836 aa16.38■□□□□ 0.21
TMEM106C-209ENST00000548640 LCORLQ8N3X6 602 aa16.38■□□□□ 0.21
TMEM106C-209ENST00000548640 RPGRQ92834 1020 aaKnown RBP16.38■□□□□ 0.21
TMEM106C-209ENST00000548640 NBPF3Q9H094 633 aa16.38■□□□□ 0.21
TMEM106C-209ENST00000548640 NCOA5Q9HCD5 579 aaKnown RBP16.38■□□□□ 0.21
TMEM106C-209ENST00000548640 MYO5AQ9Y4I1 1855 aaKnown RBP16.37■□□□□ 0.21
TMEM106C-209ENST00000548640 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.37■□□□□ 0.21
TMEM106C-209ENST00000548640 CCDC69A6NI79 296 aa16.37■□□□□ 0.21
TMEM106C-209ENST00000548640 B4E1Z4 1266 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms