RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 RASA3Q14644 834 aa12.38□□□□□ -0.43
SLC48A1-206ENST00000548498 SUPT20HL1Q3ZLR7 823 aa12.38□□□□□ -0.43
SLC48A1-206ENST00000548498 SH3TC2Q8TF17 1288 aa12.38□□□□□ -0.43
SLC48A1-206ENST00000548498 DNAAF4Q8WXU2 420 aa12.38□□□□□ -0.43
SLC48A1-206ENST00000548498 MYO1BO43795 1136 aa12.37□□□□□ -0.43
SLC48A1-206ENST00000548498 SLFN5Q08AF3 891 aa12.37□□□□□ -0.43
SLC48A1-206ENST00000548498 TAF1CQ15572 869 aaPredicted RBP12.37□□□□□ -0.43
SLC48A1-206ENST00000548498 SLC4A8Q2Y0W8 1093 aa12.37□□□□□ -0.43
SLC48A1-206ENST00000548498 CHRDL2Q6WN34 429 aa12.37□□□□□ -0.43
SLC48A1-206ENST00000548498 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.37□□□□□ -0.43
SLC48A1-206ENST00000548498 FAM43AQ8N2R8 423 aa12.37□□□□□ -0.43
SLC48A1-206ENST00000548498 HELBQ8NG08 1087 aaPredicted RBP12.37□□□□□ -0.43
SLC48A1-206ENST00000548498 SHISA4Q96DD7 197 aa12.37□□□□□ -0.43
SLC48A1-206ENST00000548498 MPHOSPH8Q99549 860 aa12.37□□□□□ -0.43
SLC48A1-206ENST00000548498 ARHGAP39Q9C0H5 1083 aa12.37□□□□□ -0.43
SLC48A1-206ENST00000548498 DOCK2Q92608 1830 aa12.37□□□□□ -0.43
SLC48A1-206ENST00000548498 COL6A3P12111 3177 aa12.36□□□□□ -0.43
SLC48A1-206ENST00000548498 CCL15-CCL14A0A0B4J2E2 113 aa12.36□□□□□ -0.43
SLC48A1-206ENST00000548498 CSF1RP07333 972 aa12.36□□□□□ -0.43
SLC48A1-206ENST00000548498 IL1R1P14778 569 aa12.36□□□□□ -0.43
SLC48A1-206ENST00000548498 VGLL4Q14135 290 aa12.36□□□□□ -0.43
SLC48A1-206ENST00000548498 CCL15Q16663 113 aa12.36□□□□□ -0.43
SLC48A1-206ENST00000548498 BEND3Q5T5X7 828 aa12.36□□□□□ -0.43
SLC48A1-206ENST00000548498 TEPSINQ96N21 525 aa12.36□□□□□ -0.43
SLC48A1-206ENST00000548498 SALL2Q9Y467 1007 aaPredicted RBP12.36□□□□□ -0.43
SLC48A1-206ENST00000548498 DOCK3Q8IZD9 2030 aa12.35□□□□□ -0.43
SLC48A1-206ENST00000548498 CT47B1P0C2W7 299 aaPredicted RBP12.35□□□□□ -0.43
SLC48A1-206ENST00000548498 FKBP5Q13451 457 aaPredicted RBP12.35□□□□□ -0.43
SLC48A1-206ENST00000548498 SPDYE2Q495Y8 402 aa12.35□□□□□ -0.43
SLC48A1-206ENST00000548498 C15orf52Q6ZUT6 534 aaKnown RBP12.35□□□□□ -0.43
SLC48A1-206ENST00000548498 NBPF11Q86T75 865 aa12.35□□□□□ -0.43
SLC48A1-206ENST00000548498 RBM27Q9P2N5 1060 aaKnown RBP12.35□□□□□ -0.43
SLC48A1-206ENST00000548498 ECM2O94769 699 aaPredicted RBP12.34□□□□□ -0.43
SLC48A1-206ENST00000548498 RBM5P52756 815 aaKnown RBP eCLIP12.34□□□□□ -0.43
SLC48A1-206ENST00000548498 FKBP1AP62942 108 aaKnown RBP12.34□□□□□ -0.43
SLC48A1-206ENST00000548498 ZNF804AQ7Z570 1209 aa12.34□□□□□ -0.43
SLC48A1-206ENST00000548498 TDRD3Q9H7E2 651 aaKnown RBP12.34□□□□□ -0.43
SLC48A1-206ENST00000548498 ZFYVE28Q9HCC9 887 aa12.34□□□□□ -0.43
SLC48A1-206ENST00000548498 ZNF70Q9UC06 446 aaPredicted RBP12.34□□□□□ -0.43
SLC48A1-206ENST00000548498 PHIPQ8WWQ0 1821 aa12.33□□□□□ -0.44
SLC48A1-206ENST00000548498 ALDH1L1O75891 902 aa12.33□□□□□ -0.44
SLC48A1-206ENST00000548498 MTFR1Q15390 333 aa12.33□□□□□ -0.44
SLC48A1-206ENST00000548498 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.33□□□□□ -0.44
SLC48A1-206ENST00000548498 TMEM39BQ9GZU3 492 aa12.33□□□□□ -0.44
SLC48A1-206ENST00000548498 UTYO14607 1347 aa12.33□□□□□ -0.44
SLC48A1-206ENST00000548498 LAMA3Q16787 3333 aa12.32□□□□□ -0.44
SLC48A1-206ENST00000548498 ANKRD18BA2A2Z9 1011 aa12.32□□□□□ -0.44
SLC48A1-206ENST00000548498 TCP10L2B9ZVM9 353 aa12.32□□□□□ -0.44
SLC48A1-206ENST00000548498 CTGFP29279 349 aa12.32□□□□□ -0.44
SLC48A1-206ENST00000548498 GTF2A2P52657 109 aa12.32□□□□□ -0.44
SLC48A1-206ENST00000548498 LACTBP83111 547 aaPredicted RBP12.32□□□□□ -0.44
SLC48A1-206ENST00000548498 TNFAIP1Q13829 316 aa12.32□□□□□ -0.44
SLC48A1-206ENST00000548498 ALDH1L2Q3SY69 923 aa12.32□□□□□ -0.44
SLC48A1-206ENST00000548498 MRPL50Q8N5N7 158 aaKnown RBP12.32□□□□□ -0.44
SLC48A1-206ENST00000548498 SNCAIPQ9Y6H5 919 aa12.32□□□□□ -0.44
SLC48A1-206ENST00000548498 PTPRCP08575 1304 aa12.32□□□□□ -0.44
SLC48A1-206ENST00000548498 FAM205AQ6ZU69 1335 aa12.32□□□□□ -0.44
SLC48A1-206ENST00000548498 SPDYE5A6NIY4 337 aa12.31□□□□□ -0.44
SLC48A1-206ENST00000548498 TLR2O60603 784 aa12.31□□□□□ -0.44
SLC48A1-206ENST00000548498 MAP3K9P80192 1104 aa12.31□□□□□ -0.44
SLC48A1-206ENST00000548498 FOXO4P98177 505 aa12.31□□□□□ -0.44
SLC48A1-206ENST00000548498 ARHGEF6Q15052 776 aa12.31□□□□□ -0.44
SLC48A1-206ENST00000548498 MFSD14BQ5SR56 506 aa12.31□□□□□ -0.44
SLC48A1-206ENST00000548498 PRO3102Q9H379 93 aa12.31□□□□□ -0.44
SLC48A1-206ENST00000548498 TTF2Q9UNY4 1162 aaKnown RBP12.31□□□□□ -0.44
SLC48A1-206ENST00000548498 DOCK1Q14185 1865 aa12.31□□□□□ -0.44
SLC48A1-206ENST00000548498 CUL9Q8IWT3 2517 aa12.3□□□□□ -0.44
SLC48A1-206ENST00000548498 BTBD19C9JJ37 291 aa12.3□□□□□ -0.44
SLC48A1-206ENST00000548498 F6X3S4 739 aa12.3□□□□□ -0.44
SLC48A1-206ENST00000548498 GRM8O00222 908 aa12.3□□□□□ -0.44
SLC48A1-206ENST00000548498 DLL1O00548 723 aa12.3□□□□□ -0.44
SLC48A1-206ENST00000548498 CACNB3P54284 484 aa12.3□□□□□ -0.44
SLC48A1-206ENST00000548498 GRIK5Q16478 980 aa12.3□□□□□ -0.44
SLC48A1-206ENST00000548498 DZIP1LQ8IYY4 767 aaKnown RBP12.3□□□□□ -0.44
SLC48A1-206ENST00000548498 SSH1Q8WYL5 1049 aa12.3□□□□□ -0.44
SLC48A1-206ENST00000548498 DPF3Q92784 378 aa12.3□□□□□ -0.44
SLC48A1-206ENST00000548498 ZNF594Q96JF6 807 aaPredicted RBP12.3□□□□□ -0.44
SLC48A1-206ENST00000548498 SERPINA10Q9UK55 444 aa12.3□□□□□ -0.44
SLC48A1-206ENST00000548498 CHMP3Q9Y3E7 222 aa12.3□□□□□ -0.44
SLC48A1-206ENST00000548498 CSADQ9Y600 493 aa12.3□□□□□ -0.44
SLC48A1-206ENST00000548498 PLIN1O60240 522 aa12.29□□□□□ -0.44
SLC48A1-206ENST00000548498 CRKP46108 304 aa12.29□□□□□ -0.44
SLC48A1-206ENST00000548498 IFIT5Q13325 482 aaKnown RBP12.29□□□□□ -0.44
SLC48A1-206ENST00000548498 EPHA10Q5JZY3 1008 aa12.29□□□□□ -0.44
SLC48A1-206ENST00000548498 UBE2Q1Q7Z7E8 422 aa12.29□□□□□ -0.44
SLC48A1-206ENST00000548498 ZKSCAN4Q969J2 545 aaPredicted RBP12.29□□□□□ -0.44
SLC48A1-206ENST00000548498 CDCA7LQ96GN5 454 aa12.29□□□□□ -0.44
SLC48A1-206ENST00000548498 ATAD5Q96QE3 1844 aa12.29□□□□□ -0.44
SLC48A1-206ENST00000548498 ADGRA2Q96PE1 1338 aa12.29□□□□□ -0.44
SLC48A1-206ENST00000548498 DDX60LQ5H9U9 1706 aaKnown RBP12.28□□□□□ -0.44
SLC48A1-206ENST00000548498 IRF6O14896 467 aa12.28□□□□□ -0.44
SLC48A1-206ENST00000548498 CETPP11597 493 aa12.28□□□□□ -0.44
SLC48A1-206ENST00000548498 GYG1P46976 350 aa12.28□□□□□ -0.44
SLC48A1-206ENST00000548498 KIF22Q14807 665 aa12.28□□□□□ -0.44
SLC48A1-206ENST00000548498 RABL6Q3YEC7 729 aaPredicted RBP12.28□□□□□ -0.44
SLC48A1-206ENST00000548498 TDRD7Q8NHU6 1098 aaKnown RBP12.28□□□□□ -0.44
SLC48A1-206ENST00000548498 KAZALD1Q96I82 304 aa12.28□□□□□ -0.44
SLC48A1-206ENST00000548498 TRIM47Q96LD4 638 aa12.28□□□□□ -0.44
SLC48A1-206ENST00000548498 SRCIN1Q9C0H9 1055 aa12.28□□□□□ -0.44
SLC48A1-206ENST00000548498 CPA4Q9UI42 421 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms