RNA–Protein interactions for RNA: ENST00000548279.5

CACNB3-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-208ENST00000548279 KIF23Q02241 960 aaPredicted RBP28.73■■■□□ 2.19
CACNB3-208ENST00000548279 PRKG1Q13976 671 aa28.73■■■□□ 2.19
CACNB3-208ENST00000548279 DZIP1LQ8IYY4 767 aaKnown RBP28.73■■■□□ 2.19
CACNB3-208ENST00000548279 NF2P35240 595 aa28.72■■■□□ 2.19
CACNB3-208ENST00000548279 PHKA1P46020 1223 aa28.72■■■□□ 2.19
CACNB3-208ENST00000548279 TTLL12Q14166 644 aaPredicted RBP28.72■■■□□ 2.19
CACNB3-208ENST00000548279 SPDYE2Q495Y8 402 aa28.72■■■□□ 2.19
CACNB3-208ENST00000548279 BEGAINQ9BUH8 593 aa28.72■■■□□ 2.19
CACNB3-208ENST00000548279 ZNF70Q9UC06 446 aaPredicted RBP28.72■■■□□ 2.19
CACNB3-208ENST00000548279 TFCP2Q12800 502 aa28.71■■■□□ 2.19
CACNB3-208ENST00000548279 FTSJ3Q8IY81 847 aaKnown RBP28.7■■■□□ 2.18
CACNB3-208ENST00000548279 C1orf115Q9H7X2 142 aa28.7■■■□□ 2.18
CACNB3-208ENST00000548279 PPP2R3BQ9Y5P8 575 aa28.7■■■□□ 2.18
CACNB3-208ENST00000548279 TIMM10P62072 90 aa28.69■■■□□ 2.18
CACNB3-208ENST00000548279 RASA3Q14644 834 aa28.69■■■□□ 2.18
CACNB3-208ENST00000548279 HDLBPQ00341 1268 aaKnown RBP28.68■■■□□ 2.18
CACNB3-208ENST00000548279 NBPF12Q5TAG4 269 aaPredicted RBP28.68■■■□□ 2.18
CACNB3-208ENST00000548279 ITPRIPQ8IWB1 547 aa28.68■■■□□ 2.18
CACNB3-208ENST00000548279 CDAN1Q8IWY9 1227 aa28.67■■■□□ 2.18
CACNB3-208ENST00000548279 CSRNP1Q96S65 589 aa28.67■■■□□ 2.18
CACNB3-208ENST00000548279 ANGEL1Q9UNK9 670 aaKnown RBP28.67■■■□□ 2.18
CACNB3-208ENST00000548279 A0A1B0GUL7 405 aa28.66■■■□□ 2.18
CACNB3-208ENST00000548279 ZBTB7BO15156 539 aaPredicted RBP28.66■■■□□ 2.18
CACNB3-208ENST00000548279 CCDC102BQ68D86 513 aa28.66■■■□□ 2.18
CACNB3-208ENST00000548279 ARMC9Q7Z3E5 817 aa28.66■■■□□ 2.18
CACNB3-208ENST00000548279 WDR66Q8TBY9 1149 aa28.66■■■□□ 2.18
CACNB3-208ENST00000548279 TEKT1Q969V4 418 aa28.66■■■□□ 2.18
CACNB3-208ENST00000548279 SUGT1Q9Y2Z0 365 aa28.66■■■□□ 2.18
CACNB3-208ENST00000548279 TCP10L2B9ZVM9 353 aa28.65■■■□□ 2.18
CACNB3-208ENST00000548279 PRDX5P30044 214 aa28.65■■■□□ 2.18
CACNB3-208ENST00000548279 POLA2Q14181 598 aa28.65■■■□□ 2.18
CACNB3-208ENST00000548279 LDLRAD1Q5T700 205 aa28.65■■■□□ 2.18
CACNB3-208ENST00000548279 PANK1Q8TE04 598 aa28.65■■■□□ 2.18
CACNB3-208ENST00000548279 CA12O43570 354 aa28.64■■■□□ 2.18
CACNB3-208ENST00000548279 CACNB3P54284 484 aa28.64■■■□□ 2.18
CACNB3-208ENST00000548279 APOBEC3HQ6NTF7 200 aaKnown RBP28.64■■■□□ 2.18
CACNB3-208ENST00000548279 XAGE2Q96GT9 111 aa28.64■■■□□ 2.18
CACNB3-208ENST00000548279 ZDHHC15Q96MV8 337 aa28.64■■■□□ 2.18
CACNB3-208ENST00000548279 TEPSINQ96N21 525 aa28.64■■■□□ 2.18
CACNB3-208ENST00000548279 MRIQ9BWK5 157 aa28.64■■■□□ 2.18
CACNB3-208ENST00000548279 GNL3LQ9NVN8 582 aaKnown RBP28.64■■■□□ 2.18
CACNB3-208ENST00000548279 MAP3K11Q16584 847 aa28.63■■■□□ 2.17
CACNB3-208ENST00000548279 MAST3O60307 1309 aa28.63■■■□□ 2.17
CACNB3-208ENST00000548279 ATP8B2P98198 1209 aa28.62■■■□□ 2.17
CACNB3-208ENST00000548279 MKRN3Q13064 507 aaKnown RBP28.62■■■□□ 2.17
CACNB3-208ENST00000548279 TNFAIP1Q13829 316 aa28.62■■■□□ 2.17
CACNB3-208ENST00000548279 RASGRF1Q13972 1273 aa28.62■■■□□ 2.17
CACNB3-208ENST00000548279 SSH3Q8TE77 659 aa28.62■■■□□ 2.17
CACNB3-208ENST00000548279 TMEM39BQ9GZU3 492 aa28.62■■■□□ 2.17
CACNB3-208ENST00000548279 DENND2AQ9ULE3 1009 aa28.62■■■□□ 2.17
CACNB3-208ENST00000548279 AKAP2Q9Y2D5 859 aa28.62■■■□□ 2.17
CACNB3-208ENST00000548279 AKAP11Q9UKA4 1901 aa28.62■■■□□ 2.17
CACNB3-208ENST00000548279 OTOFQ9HC10 1997 aa28.62■■■□□ 2.17
CACNB3-208ENST00000548279 SEMA3EO15041 775 aa28.61■■■□□ 2.17
CACNB3-208ENST00000548279 DIXDC1Q155Q3 683 aa28.61■■■□□ 2.17
CACNB3-208ENST00000548279 HHIPL2Q6UWX4 724 aa28.61■■■□□ 2.17
CACNB3-208ENST00000548279 CLMNQ96JQ2 1002 aa28.61■■■□□ 2.17
CACNB3-208ENST00000548279 SALL1Q9NSC2 1324 aa28.61■■■□□ 2.17
CACNB3-208ENST00000548279 ZBTB22O15209 634 aa28.6■■■□□ 2.17
CACNB3-208ENST00000548279 G3BP1Q13283 466 aaKnown RBP eCLIP28.6■■■□□ 2.17
CACNB3-208ENST00000548279 SUPT20HL1Q3ZLR7 823 aa28.6■■■□□ 2.17
CACNB3-208ENST00000548279 RNF186Q9NXI6 227 aa28.6■■■□□ 2.17
CACNB3-208ENST00000548279 DAGLAQ9Y4D2 1042 aa28.6■■■□□ 2.17
CACNB3-208ENST00000548279 CASP8AP2Q9UKL3 1982 aa28.59■■■□□ 2.17
CACNB3-208ENST00000548279 PPP1R12BO60237 982 aaPredicted RBP28.59■■■□□ 2.17
CACNB3-208ENST00000548279 USP2O75604 605 aaPredicted RBP28.59■■■□□ 2.17
CACNB3-208ENST00000548279 NEUROD6Q96NK8 337 aa28.59■■■□□ 2.17
CACNB3-208ENST00000548279 TRPA1O75762 1119 aa28.58■■■□□ 2.17
CACNB3-208ENST00000548279 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.58■■■□□ 2.17
CACNB3-208ENST00000548279 LDHBP07195 334 aaKnown RBP28.57■■■□□ 2.16
CACNB3-208ENST00000548279 MVPQ14764 893 aaKnown RBP28.57■■■□□ 2.16
CACNB3-208ENST00000548279 SAGE1Q9NXZ1 904 aa28.57■■■□□ 2.16
CACNB3-208ENST00000548279 CAPN15O75808 1086 aa28.56■■■□□ 2.16
CACNB3-208ENST00000548279 TNNI2P48788 182 aa28.56■■■□□ 2.16
CACNB3-208ENST00000548279 SPRYD7Q5W111 196 aa28.56■■■□□ 2.16
CACNB3-208ENST00000548279 PDS5AQ29RF7 1337 aaKnown RBP28.55■■■□□ 2.16
CACNB3-208ENST00000548279 CEP85Q6P2H3 762 aa28.55■■■□□ 2.16
CACNB3-208ENST00000548279 PI16Q6UXB8 463 aa28.55■■■□□ 2.16
CACNB3-208ENST00000548279 MYH2Q9UKX2 1941 aa28.55■■■□□ 2.16
CACNB3-208ENST00000548279 RCAN3Q9UKA8 241 aa28.54■■■□□ 2.16
CACNB3-208ENST00000548279 LAMB1P07942 1786 aa28.54■■■□□ 2.16
CACNB3-208ENST00000548279 SURF6O75683 361 aaKnown RBP28.53■■■□□ 2.16
CACNB3-208ENST00000548279 IREB2P48200 963 aaKnown RBP28.53■■■□□ 2.16
CACNB3-208ENST00000548279 CDC42EP5Q6NZY7 148 aa28.53■■■□□ 2.16
CACNB3-208ENST00000548279 REM2Q8IYK8 340 aaPredicted RBP28.53■■■□□ 2.16
CACNB3-208ENST00000548279 SLC10A4Q96EP9 437 aa28.53■■■□□ 2.16
CACNB3-208ENST00000548279 TMOD2Q9NZR1 351 aa28.53■■■□□ 2.16
CACNB3-208ENST00000548279 HMG20BQ9P0W2 317 aa28.53■■■□□ 2.16
CACNB3-208ENST00000548279 NOP58Q9Y2X3 529 aaKnown RBP28.53■■■□□ 2.16
CACNB3-208ENST00000548279 GJA5P36382 358 aa28.52■■■□□ 2.16
CACNB3-208ENST00000548279 TM4SF4P48230 202 aa28.52■■■□□ 2.16
CACNB3-208ENST00000548279 FKBP1CQ5VVH2 108 aa28.52■■■□□ 2.16
CACNB3-208ENST00000548279 FAM83AQ86UY5 434 aa28.52■■■□□ 2.16
CACNB3-208ENST00000548279 WNK4Q96J92 1243 aa28.52■■■□□ 2.16
CACNB3-208ENST00000548279 ABCF2Q9UG63 623 aa28.52■■■□□ 2.16
CACNB3-208ENST00000548279 ARID4AP29374 1257 aaPredicted RBP28.51■■■□□ 2.15
CACNB3-208ENST00000548279 TNNI3KQ59H18 835 aa28.51■■■□□ 2.15
CACNB3-208ENST00000548279 FPGT-TNNI3KV9GXZ4 949 aa28.51■■■□□ 2.15
CACNB3-208ENST00000548279 NFIAQ12857 509 aa28.5■■■□□ 2.15
CACNB3-208ENST00000548279 OS9Q13438 667 aaPredicted RBP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms