RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 TTC22Q5TAA0 569 aa21.17■□□□□ 0.98
HDAC7-227ENST00000548080 DLK2Q6UY11 383 aa21.17■□□□□ 0.98
HDAC7-227ENST00000548080 HMG20BQ9P0W2 317 aa21.17■□□□□ 0.98
HDAC7-227ENST00000548080 ARID4AP29374 1257 aaPredicted RBP21.16■□□□□ 0.98
HDAC7-227ENST00000548080 PRDX5P30044 214 aa21.16■□□□□ 0.98
HDAC7-227ENST00000548080 AOX1Q06278 1338 aa21.16■□□□□ 0.98
HDAC7-227ENST00000548080 TBC1D22AQ8WUA7 517 aa21.16■□□□□ 0.98
HDAC7-227ENST00000548080 HDAC9Q9UKV0 1011 aa21.16■□□□□ 0.98
HDAC7-227ENST00000548080 NDUFB9Q9Y6M9 179 aa21.16■□□□□ 0.98
HDAC7-227ENST00000548080 AKAP11Q9UKA4 1901 aa21.16■□□□□ 0.98
HDAC7-227ENST00000548080 RBM5P52756 815 aaKnown RBP eCLIP21.15■□□□□ 0.98
HDAC7-227ENST00000548080 CFAP100Q494V2 611 aa21.15■□□□□ 0.98
HDAC7-227ENST00000548080 CCDC158Q5M9N0 1113 aa21.15■□□□□ 0.98
HDAC7-227ENST00000548080 WDR66Q8TBY9 1149 aa21.15■□□□□ 0.98
HDAC7-227ENST00000548080 GLIS2Q9BZE0 524 aaPredicted RBP21.15■□□□□ 0.98
HDAC7-227ENST00000548080 GGA3Q9NZ52 723 aa21.15■□□□□ 0.98
HDAC7-227ENST00000548080 SEMA3EO15041 775 aa21.14■□□□□ 0.98
HDAC7-227ENST00000548080 IFIT2P09913 472 aaKnown RBP21.14■□□□□ 0.98
HDAC7-227ENST00000548080 FSTL1Q12841 308 aa21.14■□□□□ 0.98
HDAC7-227ENST00000548080 TBC1D9Q6ZT07 1266 aa21.14■□□□□ 0.98
HDAC7-227ENST00000548080 CNTROBQ8N137 903 aa21.14■□□□□ 0.98
HDAC7-227ENST00000548080 SPATA5Q8NB90 893 aa21.14■□□□□ 0.98
HDAC7-227ENST00000548080 ABCF2Q9UG63 623 aa21.14■□□□□ 0.98
HDAC7-227ENST00000548080 TRAF5O00463 557 aa21.13■□□□□ 0.97
HDAC7-227ENST00000548080 WNT10BO00744 389 aa21.13■□□□□ 0.97
HDAC7-227ENST00000548080 UQCRFS1P1P0C7P4 283 aa21.13■□□□□ 0.97
HDAC7-227ENST00000548080 DLGAP5Q15398 846 aa21.13■□□□□ 0.97
HDAC7-227ENST00000548080 ANGEL2Q5VTE6 544 aaKnown RBP21.13■□□□□ 0.97
HDAC7-227ENST00000548080 MYO5AQ9Y4I1 1855 aaKnown RBP21.13■□□□□ 0.97
HDAC7-227ENST00000548080 GSPT1P15170 499 aaKnown RBP21.13■□□□□ 0.97
HDAC7-227ENST00000548080 ADM5C9JUS6 153 aa21.12■□□□□ 0.97
HDAC7-227ENST00000548080 ITGBL1O95965 494 aaPredicted RBP21.12■□□□□ 0.97
HDAC7-227ENST00000548080 ZAP70P43403 619 aa21.12■□□□□ 0.97
HDAC7-227ENST00000548080 CRKP46108 304 aa21.12■□□□□ 0.97
HDAC7-227ENST00000548080 DIXDC1Q155Q3 683 aa21.12■□□□□ 0.97
HDAC7-227ENST00000548080 USP48Q86UV5 1035 aa21.12■□□□□ 0.97
HDAC7-227ENST00000548080 TTC41PQ6P2S7 1318 aa21.11■□□□□ 0.97
HDAC7-227ENST00000548080 CLRN2A0PK11 232 aa21.11■□□□□ 0.97
HDAC7-227ENST00000548080 LDHBP07195 334 aaKnown RBP21.11■□□□□ 0.97
HDAC7-227ENST00000548080 GPATCH3Q96I76 525 aa21.11■□□□□ 0.97
HDAC7-227ENST00000548080 ZBED3Q96IU2 234 aaPredicted RBP21.11■□□□□ 0.97
HDAC7-227ENST00000548080 PGAP2Q9UHJ9 254 aa21.11■□□□□ 0.97
HDAC7-227ENST00000548080 SALL1Q9NSC2 1324 aa21.1■□□□□ 0.97
HDAC7-227ENST00000548080 HTRA3P83110 453 aa21.1■□□□□ 0.97
HDAC7-227ENST00000548080 TSHZ3Q63HK5 1081 aa21.1■□□□□ 0.97
HDAC7-227ENST00000548080 ZC3H15Q8WU90 426 aaKnown RBP21.1■□□□□ 0.97
HDAC7-227ENST00000548080 DCPSQ96C86 337 aaKnown RBP21.1■□□□□ 0.97
HDAC7-227ENST00000548080 PRMT6Q96LA8 375 aaPredicted RBP21.1■□□□□ 0.97
HDAC7-227ENST00000548080 ECM29Q5VYK3 1845 aa21.09■□□□□ 0.97
HDAC7-227ENST00000548080 PDS5AQ29RF7 1337 aaKnown RBP21.09■□□□□ 0.97
HDAC7-227ENST00000548080 SPDYE2BA6NHP3 402 aa21.09■□□□□ 0.97
HDAC7-227ENST00000548080 CYP2E1P05181 493 aaPredicted RBP21.09■□□□□ 0.97
HDAC7-227ENST00000548080 SPDYE6P0CI01 402 aa21.09■□□□□ 0.97
HDAC7-227ENST00000548080 KRT26Q7Z3Y9 468 aa21.09■□□□□ 0.97
HDAC7-227ENST00000548080 ECHDC1Q9NTX5 307 aa21.09■□□□□ 0.97
HDAC7-227ENST00000548080 MYH2Q9UKX2 1941 aa21.09■□□□□ 0.97
HDAC7-227ENST00000548080 PI4K2BQ8TCG2 481 aa21.08■□□□□ 0.97
HDAC7-227ENST00000548080 TEKT1Q969V4 418 aa21.08■□□□□ 0.97
HDAC7-227ENST00000548080 TDRD3Q9H7E2 651 aaKnown RBP21.08■□□□□ 0.97
HDAC7-227ENST00000548080 PIH1D3Q9NQM4 214 aaKnown RBP21.08■□□□□ 0.97
HDAC7-227ENST00000548080 SERPINA10Q9UK55 444 aa21.08■□□□□ 0.97
HDAC7-227ENST00000548080 PASKQ96RG2 1323 aa21.08■□□□□ 0.96
HDAC7-227ENST00000548080 ERC2O15083 957 aa21.07■□□□□ 0.96
HDAC7-227ENST00000548080 SDSP20132 328 aa21.07■□□□□ 0.96
HDAC7-227ENST00000548080 DZIP1Q86YF9 867 aaKnown RBP21.07■□□□□ 0.96
HDAC7-227ENST00000548080 MTMR14Q8NCE2 650 aa21.07■□□□□ 0.96
HDAC7-227ENST00000548080 ZNF512BQ96KM6 892 aaPredicted RBP21.07■□□□□ 0.96
HDAC7-227ENST00000548080 ANTXR1Q9H6X2 564 aa21.07■□□□□ 0.96
HDAC7-227ENST00000548080 ZNF408Q9H9D4 720 aa21.07■□□□□ 0.96
HDAC7-227ENST00000548080 MAST3O60307 1309 aa21.07■□□□□ 0.96
HDAC7-227ENST00000548080 GLRX3O76003 335 aaKnown RBP21.07■□□□□ 0.96
HDAC7-227ENST00000548080 PRAMEF18Q5VWM3 479 aa21.07■□□□□ 0.96
HDAC7-227ENST00000548080 ERICH6Q7L0X2 663 aa21.07■□□□□ 0.96
HDAC7-227ENST00000548080 ZNF384Q8TF68 577 aa21.07■□□□□ 0.96
HDAC7-227ENST00000548080 EDC3Q96F86 508 aaKnown RBP21.07■□□□□ 0.96
HDAC7-227ENST00000548080 DNAJC2Q99543 621 aaKnown RBP21.07■□□□□ 0.96
HDAC7-227ENST00000548080 VEZTQ9HBM0 779 aa21.07■□□□□ 0.96
HDAC7-227ENST00000548080 RAI14Q9P0K7 980 aa21.07■□□□□ 0.96
HDAC7-227ENST00000548080 SUGT1Q9Y2Z0 365 aa21.07■□□□□ 0.96
HDAC7-227ENST00000548080 ZBTB22O15209 634 aa21.06■□□□□ 0.96
HDAC7-227ENST00000548080 HSPA6P17066 643 aa21.06■□□□□ 0.96
HDAC7-227ENST00000548080 MMP14P50281 582 aa21.06■□□□□ 0.96
HDAC7-227ENST00000548080 CACNB3P54284 484 aa21.06■□□□□ 0.96
HDAC7-227ENST00000548080 MECOMQ03112 1051 aa21.06■□□□□ 0.96
HDAC7-227ENST00000548080 CDC37L1Q7L3B6 337 aa21.06■□□□□ 0.96
HDAC7-227ENST00000548080 SULF1Q8IWU6 871 aa21.06■□□□□ 0.96
HDAC7-227ENST00000548080 ZGPATQ8N5A5 531 aaKnown RBP21.06■□□□□ 0.96
HDAC7-227ENST00000548080 BOLA2Q9H3K6 86 aa21.06■□□□□ 0.96
HDAC7-227ENST00000548080 LRP2BPQ9P2M1 347 aa21.06■□□□□ 0.96
HDAC7-227ENST00000548080 RBM19Q9Y4C8 960 aaKnown RBP21.06■□□□□ 0.96
HDAC7-227ENST00000548080 DAGLAQ9Y4D2 1042 aa21.06■□□□□ 0.96
HDAC7-227ENST00000548080 TRPM7Q96QT4 1865 aa21.05■□□□□ 0.96
HDAC7-227ENST00000548080 CDC45O75419 566 aa21.05■□□□□ 0.96
HDAC7-227ENST00000548080 SPTY2D1Q68D10 685 aaPredicted RBP21.05■□□□□ 0.96
HDAC7-227ENST00000548080 ZNF70Q9UC06 446 aaPredicted RBP21.05■□□□□ 0.96
HDAC7-227ENST00000548080 APLP1P51693 650 aa21.04■□□□□ 0.96
HDAC7-227ENST00000548080 HDLBPQ00341 1268 aaKnown RBP21.03■□□□□ 0.96
HDAC7-227ENST00000548080 APOBEC3HQ6NTF7 200 aaKnown RBP21.03■□□□□ 0.96
HDAC7-227ENST00000548080 HHIPL2Q6UWX4 724 aa21.03■□□□□ 0.96
HDAC7-227ENST00000548080 ZDHHC15Q96MV8 337 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms