RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 SCN7AQ01118 1682 aa21.93■■□□□ 1.1
VDR-204ENST00000547065 SALL1Q9NSC2 1324 aa21.93■■□□□ 1.1
VDR-204ENST00000547065 MBD4O95243 580 aa21.92■■□□□ 1.1
VDR-204ENST00000547065 IFNL3Q8IZI9 196 aa21.92■■□□□ 1.1
VDR-204ENST00000547065 NCOA5Q9HCD5 579 aaKnown RBP21.92■■□□□ 1.1
VDR-204ENST00000547065 GPHNQ9NQX3 736 aaPredicted RBP21.92■■□□□ 1.1
VDR-204ENST00000547065 LRP2BPQ9P2M1 347 aa21.92■■□□□ 1.1
VDR-204ENST00000547065 RPS8P62241 208 aaKnown RBP21.92■■□□□ 1.1
VDR-204ENST00000547065 CAVIN4Q5BKX8 364 aa21.92■■□□□ 1.1
VDR-204ENST00000547065 FAM173BQ6P4H8 233 aa21.92■■□□□ 1.1
VDR-204ENST00000547065 TTC6Q86TZ1 520 aa21.92■■□□□ 1.1
VDR-204ENST00000547065 PNPLA7Q6ZV29 1317 aa21.91■■□□□ 1.1
VDR-204ENST00000547065 KLF18A0A0U1RQI7 1052 aa21.91■■□□□ 1.1
VDR-204ENST00000547065 TBC1D10CQ8IV04 446 aa21.91■■□□□ 1.1
VDR-204ENST00000547065 CELF1Q92879 486 aaKnown RBP21.91■■□□□ 1.1
VDR-204ENST00000547065 AFF2P51816 1311 aa21.9■■□□□ 1.1
VDR-204ENST00000547065 CERKQ8TCT0 537 aa21.9■■□□□ 1.1
VDR-204ENST00000547065 SPATA32Q96LK8 384 aa21.9■■□□□ 1.1
VDR-204ENST00000547065 NACAP1Q9BZK3 213 aa21.9■■□□□ 1.1
VDR-204ENST00000547065 NAPBQ9H115 298 aa21.9■■□□□ 1.1
VDR-204ENST00000547065 ARMT1Q9H993 441 aa21.9■■□□□ 1.1
VDR-204ENST00000547065 TRAPPC3LQ5T215 181 aa21.89■■□□□ 1.1
VDR-204ENST00000547065 ANKRD2Q9GZV1 360 aa21.89■■□□□ 1.1
VDR-204ENST00000547065 TFIP11Q9UBB9 837 aaKnown RBP21.89■■□□□ 1.1
VDR-204ENST00000547065 CFAP45Q9UL16 551 aa21.89■■□□□ 1.1
VDR-204ENST00000547065 TRPC5Q9UL62 973 aaPredicted RBP21.89■■□□□ 1.1
VDR-204ENST00000547065 GSG1L2A8MUP6 293 aa21.89■■□□□ 1.09
VDR-204ENST00000547065 GYG1P46976 350 aa21.89■■□□□ 1.09
VDR-204ENST00000547065 LEO1Q8WVC0 666 aaPredicted RBP21.89■■□□□ 1.09
VDR-204ENST00000547065 TMEM87BQ96K49 555 aa21.89■■□□□ 1.09
VDR-204ENST00000547065 DENND2AQ9ULE3 1009 aa21.89■■□□□ 1.09
VDR-204ENST00000547065 ANGEL1Q9UNK9 670 aaKnown RBP21.89■■□□□ 1.09
VDR-204ENST00000547065 HPS5Q9UPZ3 1129 aa21.89■■□□□ 1.09
VDR-204ENST00000547065 DOCK2Q92608 1830 aa21.88■■□□□ 1.09
VDR-204ENST00000547065 GOLGA8BA8MQT2 603 aa21.88■■□□□ 1.09
VDR-204ENST00000547065 RFC4P35249 363 aa21.88■■□□□ 1.09
VDR-204ENST00000547065 VPS37DQ86XT2 251 aa21.88■■□□□ 1.09
VDR-204ENST00000547065 SEPT12Q8IYM1 358 aa21.88■■□□□ 1.09
VDR-204ENST00000547065 EPB41L4AQ9HCS5 686 aaPredicted RBP21.88■■□□□ 1.09
VDR-204ENST00000547065 MYO5AQ9Y4I1 1855 aaKnown RBP21.88■■□□□ 1.09
VDR-204ENST00000547065 COL4A1P02462 1669 aa21.88■■□□□ 1.09
VDR-204ENST00000547065 ATL3Q6DD88 541 aa21.87■■□□□ 1.09
VDR-204ENST00000547065 CYB5R4Q7L1T6 521 aa21.87■■□□□ 1.09
VDR-204ENST00000547065 FAM84BQ96KN1 310 aaPredicted RBP21.87■■□□□ 1.09
VDR-204ENST00000547065 BCL11BQ9C0K0 894 aaPredicted RBP21.87■■□□□ 1.09
VDR-204ENST00000547065 GOLGA6L4A6NEF3 574 aa21.87■■□□□ 1.09
VDR-204ENST00000547065 SH2B2O14492 632 aaPredicted RBP21.87■■□□□ 1.09
VDR-204ENST00000547065 SEMA3EO15041 775 aa21.87■■□□□ 1.09
VDR-204ENST00000547065 FDPSP14324 419 aaKnown RBP21.87■■□□□ 1.09
VDR-204ENST00000547065 CYP7A1P22680 504 aa21.87■■□□□ 1.09
VDR-204ENST00000547065 TPRNQ4KMQ1 711 aa21.87■■□□□ 1.09
VDR-204ENST00000547065 FBXO33Q7Z6M2 555 aa21.87■■□□□ 1.09
VDR-204ENST00000547065 TRIM44Q96DX7 344 aaPredicted RBP21.87■■□□□ 1.09
VDR-204ENST00000547065 CNNM2Q9H8M5 875 aa21.87■■□□□ 1.09
VDR-204ENST00000547065 RTN4Q9NQC3 1192 aaKnown RBP21.87■■□□□ 1.09
VDR-204ENST00000547065 SLC4A4Q9Y6R1 1079 aa21.87■■□□□ 1.09
VDR-204ENST00000547065 HSPA1LP34931 641 aa21.86■■□□□ 1.09
VDR-204ENST00000547065 LCORLQ8N3X6 602 aa21.86■■□□□ 1.09
VDR-204ENST00000547065 RGS22Q8NE09 1264 aa21.86■■□□□ 1.09
VDR-204ENST00000547065 IQSEC3Q9UPP2 1182 aaPredicted RBP21.86■■□□□ 1.09
VDR-204ENST00000547065 CARMIL3Q8ND23 1372 aa21.85■■□□□ 1.09
VDR-204ENST00000547065 B4E1Z4 1266 aa21.85■■□□□ 1.09
VDR-204ENST00000547065 CPLX1O14810 134 aa21.85■■□□□ 1.09
VDR-204ENST00000547065 AMIGO3Q86WK7 504 aa21.85■■□□□ 1.09
VDR-204ENST00000547065 KRT23Q9C075 422 aa21.85■■□□□ 1.09
VDR-204ENST00000547065 RAI14Q9P0K7 980 aa21.85■■□□□ 1.09
VDR-204ENST00000547065 ABCF2Q9UG63 623 aa21.85■■□□□ 1.09
VDR-204ENST00000547065 WTIPA6NIX2 430 aaPredicted RBP21.84■■□□□ 1.09
VDR-204ENST00000547065 PRKAB2O43741 272 aa21.84■■□□□ 1.09
VDR-204ENST00000547065 TM4SF1P30408 202 aa21.84■■□□□ 1.09
VDR-204ENST00000547065 TDO2P48775 406 aa21.84■■□□□ 1.09
VDR-204ENST00000547065 AKNAD1Q5T1N1 836 aa21.84■■□□□ 1.09
VDR-204ENST00000547065 FAM196AQ6ZSG2 479 aa21.84■■□□□ 1.09
VDR-204ENST00000547065 IGDCC4Q8TDY8 1250 aa21.84■■□□□ 1.09
VDR-204ENST00000547065 ZNF396Q96N95 335 aaPredicted RBP21.84■■□□□ 1.09
VDR-204ENST00000547065 COL24A1Q17RW2 1714 aa21.84■■□□□ 1.09
VDR-204ENST00000547065 ADRA2BP18089 450 aa21.84■■□□□ 1.09
VDR-204ENST00000547065 MAGEB6P1A0A0J9YX57 407 aa21.83■■□□□ 1.09
VDR-204ENST00000547065 ADD1P35611 737 aaKnown RBP21.83■■□□□ 1.09
VDR-204ENST00000547065 UVSSAQ2YD98 709 aa21.83■■□□□ 1.09
VDR-204ENST00000547065 MFSD6Q6ZSS7 791 aa21.83■■□□□ 1.09
VDR-204ENST00000547065 STAG1Q8WVM7 1258 aa21.83■■□□□ 1.09
VDR-204ENST00000547065 ORC3Q9UBD5 711 aaPredicted RBP21.83■■□□□ 1.09
VDR-204ENST00000547065 NEDD4P46934 1319 aa21.83■■□□□ 1.08
VDR-204ENST00000547065 PDS5AQ29RF7 1337 aaKnown RBP21.83■■□□□ 1.08
VDR-204ENST00000547065 LY75O60449 1722 aa21.83■■□□□ 1.08
VDR-204ENST00000547065 LIFRP42702 1097 aa21.82■■□□□ 1.08
VDR-204ENST00000547065 FOSBP53539 338 aa21.82■■□□□ 1.08
VDR-204ENST00000547065 CTDSPL2Q05D32 466 aa21.82■■□□□ 1.08
VDR-204ENST00000547065 SGMS1Q86VZ5 419 aa21.82■■□□□ 1.08
VDR-204ENST00000547065 MIGA1Q8NAN2 632 aa21.82■■□□□ 1.08
VDR-204ENST00000547065 RCOR1Q9UKL0 485 aa21.82■■□□□ 1.08
VDR-204ENST00000547065 ZBTB22O15209 634 aa21.82■■□□□ 1.08
VDR-204ENST00000547065 NPHP1O15259 732 aa21.82■■□□□ 1.08
VDR-204ENST00000547065 CDKL5O76039 1030 aa21.82■■□□□ 1.08
VDR-204ENST00000547065 TMEM67Q5HYA8 995 aa21.82■■□□□ 1.08
VDR-204ENST00000547065 NKX2-3Q8TAU0 364 aa21.82■■□□□ 1.08
VDR-204ENST00000547065 C8orf76Q96K31 380 aa21.82■■□□□ 1.08
VDR-204ENST00000547065 MTA3Q9BTC8 594 aa21.82■■□□□ 1.08
VDR-204ENST00000547065 RNF41Q9H4P4 317 aaPredicted RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms