RNA–Protein interactions for RNA: ENST00000546961.1

SCN8A-204, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-204ENST00000546961 CAVIN4Q5BKX8 364 aa25.25■■□□□ 1.63
SCN8A-204ENST00000546961 ELP3Q9H9T3 547 aa25.25■■□□□ 1.63
SCN8A-204ENST00000546961 TRIM17Q9Y577 477 aa25.24■■□□□ 1.63
SCN8A-204ENST00000546961 TNRC18O15417 2968 aaPredicted RBP25.23■■□□□ 1.63
SCN8A-204ENST00000546961 PDE8BO95263 885 aa25.23■■□□□ 1.63
SCN8A-204ENST00000546961 CDAN1Q8IWY9 1227 aa25.23■■□□□ 1.63
SCN8A-204ENST00000546961 KLHDC4Q8TBB5 520 aa25.23■■□□□ 1.63
SCN8A-204ENST00000546961 TEPSINQ96N21 525 aa25.23■■□□□ 1.63
SCN8A-204ENST00000546961 TMEM39BQ9GZU3 492 aa25.23■■□□□ 1.63
SCN8A-204ENST00000546961 A0A1B0GUL6 1792 aa25.23■■□□□ 1.63
SCN8A-204ENST00000546961 TNNI2P48788 182 aa25.22■■□□□ 1.63
SCN8A-204ENST00000546961 BCAMP50895 628 aa25.22■■□□□ 1.63
SCN8A-204ENST00000546961 SSH1Q8WYL5 1049 aa25.22■■□□□ 1.63
SCN8A-204ENST00000546961 PTPN18Q99952 460 aa25.22■■□□□ 1.63
SCN8A-204ENST00000546961 USP44Q9H0E7 712 aa25.22■■□□□ 1.63
SCN8A-204ENST00000546961 PTPRCP08575 1304 aa25.21■■□□□ 1.63
SCN8A-204ENST00000546961 MAP3K9P80192 1104 aa25.21■■□□□ 1.63
SCN8A-204ENST00000546961 CRHR2Q13324 411 aa25.21■■□□□ 1.63
SCN8A-204ENST00000546961 TBC1D22AQ8WUA7 517 aa25.21■■□□□ 1.63
SCN8A-204ENST00000546961 OPTNQ96CV9 577 aa25.21■■□□□ 1.63
SCN8A-204ENST00000546961 E9PSI1 815 aa25.2■■□□□ 1.62
SCN8A-204ENST00000546961 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.2■■□□□ 1.62
SCN8A-204ENST00000546961 OTOP1Q7RTM1 612 aa25.2■■□□□ 1.62
SCN8A-204ENST00000546961 VGLL2Q8N8G2 317 aa25.2■■□□□ 1.62
SCN8A-204ENST00000546961 TESPA1A2RU30 521 aaPredicted RBP25.19■■□□□ 1.62
SCN8A-204ENST00000546961 CACNB3P54284 484 aa25.19■■□□□ 1.62
SCN8A-204ENST00000546961 HDLBPQ00341 1268 aaKnown RBP25.19■■□□□ 1.62
SCN8A-204ENST00000546961 CNKSR2Q8WXI2 1034 aa25.19■■□□□ 1.62
SCN8A-204ENST00000546961 TEKT1Q969V4 418 aa25.19■■□□□ 1.62
SCN8A-204ENST00000546961 ERO1AQ96HE7 468 aa25.19■■□□□ 1.62
SCN8A-204ENST00000546961 CD99L2Q8TCZ2 262 aa25.18■■□□□ 1.62
SCN8A-204ENST00000546961 ECM29Q5VYK3 1845 aa25.18■■□□□ 1.62
SCN8A-204ENST00000546961 IFIT1P09914 478 aaKnown RBP25.17■■□□□ 1.62
SCN8A-204ENST00000546961 MS4A4AQ96JQ5 239 aa25.17■■□□□ 1.62
SCN8A-204ENST00000546961 MRIQ9BWK5 157 aa25.17■■□□□ 1.62
SCN8A-204ENST00000546961 CSADQ9Y600 493 aa25.17■■□□□ 1.62
SCN8A-204ENST00000546961 SP3Q02447 781 aa25.16■■□□□ 1.62
SCN8A-204ENST00000546961 SLFN5Q08AF3 891 aa25.16■■□□□ 1.62
SCN8A-204ENST00000546961 VGLL4Q14135 290 aa25.16■■□□□ 1.62
SCN8A-204ENST00000546961 PUM3Q15397 648 aaKnown RBP25.15■■□□□ 1.62
SCN8A-204ENST00000546961 BRI3BPQ8WY22 251 aa25.15■■□□□ 1.62
SCN8A-204ENST00000546961 EFCC1Q9HA90 598 aa25.15■■□□□ 1.62
SCN8A-204ENST00000546961 TMOD2Q9NZR1 351 aa25.15■■□□□ 1.62
SCN8A-204ENST00000546961 CCL15-CCL14A0A0B4J2E2 113 aa25.14■■□□□ 1.62
SCN8A-204ENST00000546961 EYA2O00167 538 aa25.14■■□□□ 1.62
SCN8A-204ENST00000546961 FGFR2P21802 821 aa25.14■■□□□ 1.62
SCN8A-204ENST00000546961 GTF2A2P52657 109 aa25.14■■□□□ 1.62
SCN8A-204ENST00000546961 CCL15Q16663 113 aa25.14■■□□□ 1.62
SCN8A-204ENST00000546961 PRPF38BQ5VTL8 546 aaKnown RBP25.14■■□□□ 1.62
SCN8A-204ENST00000546961 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.14■■□□□ 1.62
SCN8A-204ENST00000546961 OTUD5Q96G74 571 aa25.14■■□□□ 1.62
SCN8A-204ENST00000546961 ZDHHC15Q96MV8 337 aa25.14■■□□□ 1.62
SCN8A-204ENST00000546961 PTPN22Q9Y2R2 807 aa25.14■■□□□ 1.62
SCN8A-204ENST00000546961 APOBEC3HQ6NTF7 200 aaKnown RBP25.13■■□□□ 1.61
SCN8A-204ENST00000546961 CDCA7LQ96GN5 454 aa25.13■■□□□ 1.61
SCN8A-204ENST00000546961 RFX5P48382 616 aaPredicted RBP25.12■■□□□ 1.61
SCN8A-204ENST00000546961 INTS3Q68E01 1043 aaKnown RBP25.12■■□□□ 1.61
SCN8A-204ENST00000546961 SUGT1Q9Y2Z0 365 aa25.12■■□□□ 1.61
SCN8A-204ENST00000546961 SLC5A1P13866 664 aa25.11■■□□□ 1.61
SCN8A-204ENST00000546961 TAF1CQ15572 869 aaPredicted RBP25.11■■□□□ 1.61
SCN8A-204ENST00000546961 ALDH1L2Q3SY69 923 aa25.11■■□□□ 1.61
SCN8A-204ENST00000546961 HHIPL2Q6UWX4 724 aa25.11■■□□□ 1.61
SCN8A-204ENST00000546961 LPIN2Q92539 896 aa25.11■■□□□ 1.61
SCN8A-204ENST00000546961 ZFYVE28Q9HCC9 887 aa25.11■■□□□ 1.61
SCN8A-204ENST00000546961 SMC4Q9NTJ3 1288 aa25.11■■□□□ 1.61
SCN8A-204ENST00000546961 MAST3O60307 1309 aa25.11■■□□□ 1.61
SCN8A-204ENST00000546961 FKBP1CQ5VVH2 108 aa25.1■■□□□ 1.61
SCN8A-204ENST00000546961 FAM83AQ86UY5 434 aa25.1■■□□□ 1.61
SCN8A-204ENST00000546961 WDR66Q8TBY9 1149 aa25.1■■□□□ 1.61
SCN8A-204ENST00000546961 ZKSCAN4Q969J2 545 aaPredicted RBP25.1■■□□□ 1.61
SCN8A-204ENST00000546961 KIF16BQ96L93 1317 aa25.1■■□□□ 1.61
SCN8A-204ENST00000546961 CAP1Q01518 475 aa25.09■■□□□ 1.61
SCN8A-204ENST00000546961 FAM43AQ8N2R8 423 aa25.09■■□□□ 1.61
SCN8A-204ENST00000546961 HOOK2Q96ED9 719 aa25.09■■□□□ 1.61
SCN8A-204ENST00000546961 WRNIP1Q96S55 665 aa25.09■■□□□ 1.61
SCN8A-204ENST00000546961 POTEFA5A3E0 1075 aa25.08■■□□□ 1.61
SCN8A-204ENST00000546961 SPDYE5A6NIY4 337 aa25.08■■□□□ 1.61
SCN8A-204ENST00000546961 MIGA2Q7L4E1 593 aa25.08■■□□□ 1.61
SCN8A-204ENST00000546961 ATG9AQ7Z3C6 839 aa25.08■■□□□ 1.61
SCN8A-204ENST00000546961 ERO1BQ86YB8 467 aa25.08■■□□□ 1.61
SCN8A-204ENST00000546961 SIL1Q9H173 461 aa25.08■■□□□ 1.61
SCN8A-204ENST00000546961 SNCAIPQ9Y6H5 919 aa25.08■■□□□ 1.61
SCN8A-204ENST00000546961 UBTFL1P0CB47 393 aaPredicted RBP25.07■■□□□ 1.6
SCN8A-204ENST00000546961 CETPP11597 493 aa25.07■■□□□ 1.6
SCN8A-204ENST00000546961 ARHGEF6Q15052 776 aa25.07■■□□□ 1.6
SCN8A-204ENST00000546961 CEP126Q9P2H0 1117 aa25.07■■□□□ 1.6
SCN8A-204ENST00000546961 WDHD1O75717 1129 aaPredicted RBP25.06■■□□□ 1.6
SCN8A-204ENST00000546961 DCAF15Q66K64 600 aa25.06■■□□□ 1.6
SCN8A-204ENST00000546961 NOB1Q9ULX3 412 aaKnown RBP25.06■■□□□ 1.6
SCN8A-204ENST00000546961 KIAA0100Q14667 2235 aaKnown RBP25.05■■□□□ 1.6
SCN8A-204ENST00000546961 GNL3LQ9NVN8 582 aaKnown RBP25.05■■□□□ 1.6
SCN8A-204ENST00000546961 IRF6O14896 467 aa25.04■■□□□ 1.6
SCN8A-204ENST00000546961 TCP10Q12799 353 aa25.04■■□□□ 1.6
SCN8A-204ENST00000546961 SNAPC2Q13487 334 aa25.04■■□□□ 1.6
SCN8A-204ENST00000546961 DIXDC1Q155Q3 683 aa25.04■■□□□ 1.6
SCN8A-204ENST00000546961 ATP2B3Q16720 1220 aa25.04■■□□□ 1.6
SCN8A-204ENST00000546961 ARMC5Q96C12 935 aa25.04■■□□□ 1.6
SCN8A-204ENST00000546961 ZNF341Q9BYN7 854 aa25.04■■□□□ 1.6
SCN8A-204ENST00000546961 BTBD19C9JJ37 291 aa25.03■■□□□ 1.6
SCN8A-204ENST00000546961 CDC42EP5Q6NZY7 148 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms