RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 TEX13AQ9BXU3 409 aaPredicted RBP15.91■□□□□ 0.14
SLC38A1-204ENST00000546893 TNS2Q63HR2 1409 aa15.91■□□□□ 0.14
SLC38A1-204ENST00000546893 ZNF335Q9H4Z2 1342 aaPredicted RBP15.9■□□□□ 0.14
SLC38A1-204ENST00000546893 A0A1B0GUL7 405 aa15.9■□□□□ 0.14
SLC38A1-204ENST00000546893 MYO1BO43795 1136 aa15.9■□□□□ 0.14
SLC38A1-204ENST00000546893 KCNJ6P48051 423 aa15.9■□□□□ 0.14
SLC38A1-204ENST00000546893 COL9A3Q14050 684 aaPredicted RBP15.9■□□□□ 0.14
SLC38A1-204ENST00000546893 NEK11Q8NG66 645 aa15.9■□□□□ 0.14
SLC38A1-204ENST00000546893 SPATA31A3Q5VYP0 1347 aa15.9■□□□□ 0.14
SLC38A1-204ENST00000546893 ME1P48163 572 aa15.9■□□□□ 0.14
SLC38A1-204ENST00000546893 LRRC8AQ8IWT6 810 aa15.9■□□□□ 0.14
SLC38A1-204ENST00000546893 ZNF512BQ96KM6 892 aaPredicted RBP15.9■□□□□ 0.14
SLC38A1-204ENST00000546893 USP28Q96RU2 1077 aa15.9■□□□□ 0.14
SLC38A1-204ENST00000546893 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.9■□□□□ 0.146e-7■□□□□ 10.9
SLC38A1-204ENST00000546893 BRMS1Q9HCU9 246 aa15.9■□□□□ 0.14
SLC38A1-204ENST00000546893 KCPQ6ZWJ8 1503 aa15.9■□□□□ 0.14
SLC38A1-204ENST00000546893 CDKL5O76039 1030 aa15.89■□□□□ 0.13
SLC38A1-204ENST00000546893 TNNT1P13805 278 aa15.89■□□□□ 0.13
SLC38A1-204ENST00000546893 CCDC57Q2TAC2 916 aa15.89■□□□□ 0.13
SLC38A1-204ENST00000546893 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.89■□□□□ 0.13
SLC38A1-204ENST00000546893 FSIP1Q8NA03 581 aa15.89■□□□□ 0.13
SLC38A1-204ENST00000546893 APPBP2Q92624 585 aa15.89■□□□□ 0.13
SLC38A1-204ENST00000546893 ISCA1Q9BUE6 129 aa15.89■□□□□ 0.13
SLC38A1-204ENST00000546893 NBPF26B4DH59 902 aa15.89■□□□□ 0.13
SLC38A1-204ENST00000546893 NBPF14Q5TI25 921 aa15.89■□□□□ 0.13
SLC38A1-204ENST00000546893 NBPF10Q6P3W6 841 aaKnown RBP15.89■□□□□ 0.13
SLC38A1-204ENST00000546893 NBPF15Q8N660 670 aa15.89■□□□□ 0.13
SLC38A1-204ENST00000546893 NCOA7Q8NI08 942 aa15.89■□□□□ 0.13
SLC38A1-204ENST00000546893 ZCRB1Q8TBF4 217 aaKnown RBP15.89■□□□□ 0.13
SLC38A1-204ENST00000546893 TTC39AQ5SRH9 613 aa15.88■□□□□ 0.13
SLC38A1-204ENST00000546893 FMR1NBQ8N0W7 255 aaPredicted RBP15.88■□□□□ 0.13
SLC38A1-204ENST00000546893 OSBPL5Q9H0X9 879 aaPredicted RBP15.88■□□□□ 0.13
SLC38A1-204ENST00000546893 CEP83Q9Y592 693 aa15.88■□□□□ 0.13
SLC38A1-204ENST00000546893 WDR17Q8IZU2 1322 aa15.88■□□□□ 0.13
SLC38A1-204ENST00000546893 TTF1Q15361 905 aaPredicted RBP15.88■□□□□ 0.13
SLC38A1-204ENST00000546893 SF3A1Q15459 793 aaKnown RBP15.88■□□□□ 0.13
SLC38A1-204ENST00000546893 TPD52L1Q16890 204 aaPredicted RBP15.88■□□□□ 0.13
SLC38A1-204ENST00000546893 CCDC150Q8NCX0 1101 aa15.88■□□□□ 0.13
SLC38A1-204ENST00000546893 C8orf76Q96K31 380 aa15.88■□□□□ 0.13
SLC38A1-204ENST00000546893 TOMM22Q9NS69 142 aa15.88■□□□□ 0.13
SLC38A1-204ENST00000546893 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.88■□□□□ 0.13
SLC38A1-204ENST00000546893 V9GYY5 206 aaPredicted RBP15.88■□□□□ 0.13
SLC38A1-204ENST00000546893 CCP110O43303 1012 aa15.87■□□□□ 0.13
SLC38A1-204ENST00000546893 GORABQ5T7V8 394 aa15.87■□□□□ 0.13
SLC38A1-204ENST00000546893 RALYLQ86SE5 291 aaKnown RBP15.87■□□□□ 0.13
SLC38A1-204ENST00000546893 JMYQ8N9B5 988 aa15.87■□□□□ 0.13
SLC38A1-204ENST00000546893 LINC00301Q8NCQ3 95 aa15.87■□□□□ 0.13
SLC38A1-204ENST00000546893 FBXO18Q8NFZ0 1043 aa15.87■□□□□ 0.13
SLC38A1-204ENST00000546893 CACTINQ8WUQ7 758 aaKnown RBP15.87■□□□□ 0.13
SLC38A1-204ENST00000546893 ATRNO75882 1429 aa15.87■□□□□ 0.13
SLC38A1-204ENST00000546893 PATL2C9JE40 543 aaKnown RBP15.86■□□□□ 0.13
SLC38A1-204ENST00000546893 PCCAP05165 728 aaPredicted RBP15.86■□□□□ 0.13
SLC38A1-204ENST00000546893 CCDC172P0C7W6 258 aa15.86■□□□□ 0.13
SLC38A1-204ENST00000546893 TIMM10P62072 90 aa15.86■□□□□ 0.13
SLC38A1-204ENST00000546893 TCIRG1Q13488 830 aa15.86■□□□□ 0.13
SLC38A1-204ENST00000546893 STK38Q15208 465 aa15.86■□□□□ 0.13
SLC38A1-204ENST00000546893 SLFNL1Q499Z3 407 aa15.86■□□□□ 0.13
SLC38A1-204ENST00000546893 CPLX2Q6PUV4 134 aaKnown RBP15.86■□□□□ 0.13
SLC38A1-204ENST00000546893 DHX40Q8IX18 779 aaKnown RBP15.86■□□□□ 0.13
SLC38A1-204ENST00000546893 SDF4Q9BRK5 362 aa15.86■□□□□ 0.13
SLC38A1-204ENST00000546893 ZNF215Q9UL58 517 aaPredicted RBP15.86■□□□□ 0.13
SLC38A1-204ENST00000546893 DDX60Q8IY21 1712 aaKnown RBP15.86■□□□□ 0.13
SLC38A1-204ENST00000546893 SYNE3Q6ZMZ3 975 aa15.86■□□□□ 0.13
SLC38A1-204ENST00000546893 KRBA2Q6ZNG9 492 aa15.86■□□□□ 0.13
SLC38A1-204ENST00000546893 MB21D2Q8IYB1 491 aaPredicted RBP15.86■□□□□ 0.13
SLC38A1-204ENST00000546893 LRRC2Q9BYS8 371 aa15.86■□□□□ 0.13
SLC38A1-204ENST00000546893 GOLPH3LQ9H4A5 285 aa15.86■□□□□ 0.13
SLC38A1-204ENST00000546893 PCDHA7Q9UN72 937 aa15.86■□□□□ 0.13
SLC38A1-204ENST00000546893 CDHR2Q9BYE9 1310 aa15.86■□□□□ 0.13
SLC38A1-204ENST00000546893 CPLX1O14810 134 aa15.85■□□□□ 0.13
SLC38A1-204ENST00000546893 CCT2P78371 535 aaKnown RBP15.85■□□□□ 0.13
SLC38A1-204ENST00000546893 TRDNQ13061 729 aa15.85■□□□□ 0.13
SLC38A1-204ENST00000546893 ELF2Q15723 593 aa15.85■□□□□ 0.13
SLC38A1-204ENST00000546893 CEP135Q66GS9 1140 aa15.85■□□□□ 0.13
SLC38A1-204ENST00000546893 C11orf57Q6ZUT1 292 aaPredicted RBP15.85■□□□□ 0.13
SLC38A1-204ENST00000546893 KIAA1468Q9P260 1216 aa15.85■□□□□ 0.13
SLC38A1-204ENST00000546893 XIRP1Q702N8 1843 aaKnown RBP15.85■□□□□ 0.13
SLC38A1-204ENST00000546893 SPTLC2O15270 562 aa15.85■□□□□ 0.13
SLC38A1-204ENST00000546893 CMA1P23946 247 aa15.85■□□□□ 0.13
SLC38A1-204ENST00000546893 HSP90AB3PQ58FF7 597 aa15.85■□□□□ 0.13
SLC38A1-204ENST00000546893 ELOA2Q8IYF1 753 aaPredicted RBP15.85■□□□□ 0.13
SLC38A1-204ENST00000546893 GPATCH11Q8N954 259 aa15.85■□□□□ 0.13
SLC38A1-204ENST00000546893 NDUFB9Q9Y6M9 179 aa15.85■□□□□ 0.13
SLC38A1-204ENST00000546893 M0R2C6 588 aa15.84■□□□□ 0.13
SLC38A1-204ENST00000546893 ZNF213O14771 459 aa15.84■□□□□ 0.13
SLC38A1-204ENST00000546893 IKBKBO14920 756 aa15.84■□□□□ 0.13
SLC38A1-204ENST00000546893 PRC1O43663 620 aa15.84■□□□□ 0.13
SLC38A1-204ENST00000546893 CSF1RP07333 972 aa15.84■□□□□ 0.13
SLC38A1-204ENST00000546893 PTPN14Q15678 1187 aa15.84■□□□□ 0.13
SLC38A1-204ENST00000546893 OSBP2Q969R2 916 aa15.84■□□□□ 0.13
SLC38A1-204ENST00000546893 FHOD1Q9Y613 1164 aa15.84■□□□□ 0.13
SLC38A1-204ENST00000546893 ZMYM6O95789 1325 aa15.84■□□□□ 0.13
SLC38A1-204ENST00000546893 SKILP12757 684 aa15.84■□□□□ 0.13
SLC38A1-204ENST00000546893 FDPSP14324 419 aaKnown RBP15.84■□□□□ 0.13
SLC38A1-204ENST00000546893 LRMPQ12912 555 aa15.84■□□□□ 0.13
SLC38A1-204ENST00000546893 LRRC24Q50LG9 513 aa15.84■□□□□ 0.13
SLC38A1-204ENST00000546893 MYSM1Q5VVJ2 828 aa15.84■□□□□ 0.13
SLC38A1-204ENST00000546893 TTLL7Q6ZT98 887 aa15.84■□□□□ 0.13
SLC38A1-204ENST00000546893 NYAP1Q6ZVC0 841 aa15.84■□□□□ 0.13
SLC38A1-204ENST00000546893 ILDR1Q86SU0 546 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms